Source Name	Characteristics [Organism]	Term Source REF	Term Accession Number	Description	Comment [Sample_characteristics]	Comment [Sample_source_name]	Protocol REF	Protocol REF	Sample Name	Protocol REF	Extract Name	Material Type	Protocol REF	Labeled Extract Name	Label	Material Type	Hybridization Name	Array Design REF	Protocol REF	Scan Name	Array Data File	Comment [ArrayExpress FTP file]	Protocol REF	Derived Array Data Matrix File	Comment [Derived ArrayExpress FTP file]
GSE19286GSM478606	Mus musculus	EFO	http://purl.org/obo/owl/NCBITaxon#NCBITaxon_10090	Aortas isolated from atherosclerotic APOE-deficient mice, Gene expression data from atherosclerotic aortas isolated from APOE-deficient mice., APOE-1. strain: C57BL/6J; genotype: APOE-deficient; tissue: aorta; treatment: none; disease: atherosclerosis; age: 32-34 weeks	strain: C57BL/6J; genotype: APOE-deficient; tissue: aorta; treatment: none; disease: atherosclerosis; age: 32-34 weeks	Aortas isolated from atherosclerotic APOE-deficient mice	P-G19286-1	P-G19286-2	GSE19286GSM478606 sample	P-G19286-5	GSE19286GSM478606 extract	total_RNA	P-G19286-3	GSE19286GSM478606 LE biotin	biotin	synthetic_RNA	Aorta_APOE-deficient with atherosclerosis_1	A-AFFY-45	P-AFFY-6	GSM478606.CEL	GSM478606.CEL	ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-19286/E-GEOD-19286.raw.1.zip	P-G19286-4	E-GEOD-19286-processed-data-1834694307.txt	ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-19286/E-GEOD-19286.processed.1.zip
GSE19286GSM478611	Mus musculus	EFO	http://purl.org/obo/owl/NCBITaxon#NCBITaxon_10090	Aortas isolated from non-transgenic C57BL/6J control mice, Gene expression data from aortas isolated from non-transgenic C57BL/6J control mice., Cont-2. strain: C57BL/6J; genotype: non-transgenic; tissue: aorta; age: 32-34 weeks	strain: C57BL/6J; genotype: non-transgenic; tissue: aorta; age: 32-34 weeks	Aortas isolated from non-transgenic C57BL/6J control mice	P-G19286-1	P-G19286-2	GSE19286GSM478611 sample	P-G19286-5	GSE19286GSM478611 extract	total_RNA	P-G19286-3	GSE19286GSM478611 LE biotin	biotin	synthetic_RNA	Aorta_non-transgenic C57BL/6J control_2	A-AFFY-45	P-AFFY-6	GSM478611.CEL	GSM478611.CEL	ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-19286/E-GEOD-19286.raw.1.zip	P-G19286-4	E-GEOD-19286-processed-data-1834694307.txt	ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-19286/E-GEOD-19286.processed.1.zip
GSE19286GSM478607	Mus musculus	EFO	http://purl.org/obo/owl/NCBITaxon#NCBITaxon_10090	Aortas isolated from atherosclerotic APOE-deficient mice, Gene expression data from atherosclerotic aortas isolated from APOE-deficient mice., APOE-2. strain: C57BL/6J; genotype: APOE-deficient; tissue: aorta; treatment: none; disease: atherosclerosis; age: 32-34 weeks	strain: C57BL/6J; genotype: APOE-deficient; tissue: aorta; treatment: none; disease: atherosclerosis; age: 32-34 weeks	Aortas isolated from atherosclerotic APOE-deficient mice	P-G19286-1	P-G19286-2	GSE19286GSM478607 sample	P-G19286-5	GSE19286GSM478607 extract	total_RNA	P-G19286-3	GSE19286GSM478607 LE biotin	biotin	synthetic_RNA	Aorta_APOE-deficient with atherosclerosis_2	A-AFFY-45	P-AFFY-6	GSM478607.CEL	GSM478607.CEL	ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-19286/E-GEOD-19286.raw.1.zip	P-G19286-4	E-GEOD-19286-processed-data-1834694307.txt	ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-19286/E-GEOD-19286.processed.1.zip
GSE19286GSM478609	Mus musculus	EFO	http://purl.org/obo/owl/NCBITaxon#NCBITaxon_10090	Aortas isolated from captopril-treated APOE-deficient mice, Gene expression data from aortas isolated from captopril-treated APOE-deficient mice., Capto-2. strain: C57BL/6J; genotype: APOE-deficient; tissue: aorta; treatment: captopril; treatment time: 7 months; age: 32-34 weeks	strain: C57BL/6J; genotype: APOE-deficient; tissue: aorta; treatment: captopril; treatment time: 7 months; age: 32-34 weeks	Aortas isolated from captopril-treated APOE-deficient mice	P-G19286-1	P-G19286-2	GSE19286GSM478609 sample	P-G19286-5	GSE19286GSM478609 extract	total_RNA	P-G19286-3	GSE19286GSM478609 LE biotin	biotin	synthetic_RNA	Aorta_APOE-deficient and captopril treated_2	A-AFFY-45	P-AFFY-6	GSM478609.CEL	GSM478609.CEL	ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-19286/E-GEOD-19286.raw.1.zip	P-G19286-4	E-GEOD-19286-processed-data-1834694307.txt	ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-19286/E-GEOD-19286.processed.1.zip
GSE19286GSM478610	Mus musculus	EFO	http://purl.org/obo/owl/NCBITaxon#NCBITaxon_10090	Aortas isolated from non-transgenic C57BL/6J control mice, Gene expression data from aortas isolated from non-transgenic C57BL/6J control mice., Cont-1. strain: C57BL/6J; genotype: non-transgenic; tissue: aorta; age: 32-34 weeks	strain: C57BL/6J; genotype: non-transgenic; tissue: aorta; age: 32-34 weeks	Aortas isolated from non-transgenic C57BL/6J control mice	P-G19286-1	P-G19286-2	GSE19286GSM478610 sample	P-G19286-5	GSE19286GSM478610 extract	total_RNA	P-G19286-3	GSE19286GSM478610 LE biotin	biotin	synthetic_RNA	Aorta_non-transgenic C57BL/6J control_1	A-AFFY-45	P-AFFY-6	GSM478610.CEL	GSM478610.CEL	ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-19286/E-GEOD-19286.raw.1.zip	P-G19286-4	E-GEOD-19286-processed-data-1834694307.txt	ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-19286/E-GEOD-19286.processed.1.zip
GSE19286GSM478608	Mus musculus	EFO	http://purl.org/obo/owl/NCBITaxon#NCBITaxon_10090	Aortas isolated from captopril-treated APOE-deficient mice, Gene expression data from aortas isolated from captopril-treated APOE-deficient mice., Capto-1. strain: C57BL/6J; genotype: APOE-deficient; tissue: aorta; treatment: captopril; treatment time: 7 months; age: 32-34 weeks	strain: C57BL/6J; genotype: APOE-deficient; tissue: aorta; treatment: captopril; treatment time: 7 months; age: 32-34 weeks	Aortas isolated from captopril-treated APOE-deficient mice	P-G19286-1	P-G19286-2	GSE19286GSM478608 sample	P-G19286-5	GSE19286GSM478608 extract	total_RNA	P-G19286-3	GSE19286GSM478608 LE biotin	biotin	synthetic_RNA	Aorta_APOE-deficient and captopril treated_1	A-AFFY-45	P-AFFY-6	GSM478608.CEL	GSM478608.CEL	ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-19286/E-GEOD-19286.raw.1.zip	P-G19286-4	E-GEOD-19286-processed-data-1834694307.txt	ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-19286/E-GEOD-19286.processed.1.zip