Source Name Characteristics [Genotype] Characteristics [StrainOrLine] Characteristics [Organism] Term Source REF Term Accession Number Sample Name Extract Name Material Type Labeled Extract Name Label Material Type Protocol REF Hybridization Name Array Design REF Protocol REF Factor Value [Genotype] Scan Name Array Data File Comment [ArrayExpress FTP file] Derived Array Data Matrix File Comment [Derived ArrayExpress FTP file] GSE1639GSM27843 H3delta(1-28) NSY458 Saccharomyces cerevisiae EFO http://purl.org/obo/owl/NCBITaxon#NCBITaxon_4932 GSE1639GSM27843 sample GSE1639GSM27843 extract total_RNA GSE1639GSM27843 LE.biotin biotin synthetic_RNA Affymetrix:Protocol:Hybridization-EukGE-WS2v4 H3delta(1-28) 2 A-AFFY-27 P-AFFY-6 H3delta(1-28) H3delta(1-28) 2 GSM27843.CEL ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-1639/E-GEOD-1639.raw.1.zip E-GEOD-1639-processed-data-1442068989.txt ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-1639/E-GEOD-1639.processed.1.zip GSE1639GSM27842 H3delta(1-28) NSY458 Saccharomyces cerevisiae EFO http://purl.org/obo/owl/NCBITaxon#NCBITaxon_4932 GSE1639GSM27842 sample GSE1639GSM27842 extract total_RNA GSE1639GSM27842 LE.biotin biotin synthetic_RNA Affymetrix:Protocol:Hybridization-EukGE-WS2v4 H3delta(1-28) 1 A-AFFY-27 P-AFFY-6 H3delta(1-28) H3delta(1-28) 1 GSM27842.CEL ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-1639/E-GEOD-1639.raw.1.zip E-GEOD-1639-processed-data-1442068989.txt ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-1639/E-GEOD-1639.processed.1.zip GSE1639GSM27848 H4delta(2-26) NSY438 Saccharomyces cerevisiae EFO http://purl.org/obo/owl/NCBITaxon#NCBITaxon_4932 GSE1639GSM27848 sample GSE1639GSM27848 extract total_RNA GSE1639GSM27848 LE.biotin biotin synthetic_RNA Affymetrix:Protocol:Hybridization-EukGE-WS2v4 H4delta(2-26) 2 A-AFFY-27 P-AFFY-6 H4delta(2-26) H4delta(2-26) 2 GSM27848.CEL ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-1639/E-GEOD-1639.raw.1.zip E-GEOD-1639-processed-data-1442068989.txt ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-1639/E-GEOD-1639.processed.1.zip GSE1639GSM27847 H4delta(2-26) NSY438 Saccharomyces cerevisiae EFO http://purl.org/obo/owl/NCBITaxon#NCBITaxon_4932 GSE1639GSM27847 sample GSE1639GSM27847 extract total_RNA GSE1639GSM27847 LE.biotin biotin synthetic_RNA Affymetrix:Protocol:Hybridization-Unknown H4delta(2-26) 1 A-AFFY-27 P-AFFY-6 H4delta(2-26) H4delta(2-26) 1 GSM27847.CEL ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-1639/E-GEOD-1639.raw.1.zip E-GEOD-1639-processed-data-1442068989.txt ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-1639/E-GEOD-1639.processed.1.zip GSE1639GSM27837 wild_type NSY429 Saccharomyces cerevisiae EFO http://purl.org/obo/owl/NCBITaxon#NCBITaxon_4932 GSE1639GSM27837 sample GSE1639GSM27837 extract total_RNA GSE1639GSM27837 LE.biotin biotin synthetic_RNA Affymetrix:Protocol:Hybridization-EukGE-WS2v4 Wild type 1 A-AFFY-27 P-AFFY-6 wild_type Wild type 1 GSM27837.CEL ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-1639/E-GEOD-1639.raw.1.zip E-GEOD-1639-processed-data-1442068989.txt ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-1639/E-GEOD-1639.processed.1.zip GSE1639GSM27838 wild_type NSY429 Saccharomyces cerevisiae EFO http://purl.org/obo/owl/NCBITaxon#NCBITaxon_4932 GSE1639GSM27838 sample GSE1639GSM27838 extract total_RNA GSE1639GSM27838 LE.biotin biotin synthetic_RNA Affymetrix:Protocol:Hybridization-EukGE-WS2v4 Wild type 2 A-AFFY-27 P-AFFY-6 wild_type Wild type 2 GSM27838.CEL ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-1639/E-GEOD-1639.raw.1.zip E-GEOD-1639-processed-data-1442068989.txt ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-1639/E-GEOD-1639.processed.1.zip GSE1639GSM27853 rpd3Δ H4(K5,8,12,16Q) RMY492 Saccharomyces cerevisiae EFO http://purl.org/obo/owl/NCBITaxon#NCBITaxon_4932 GSE1639GSM27853 sample GSE1639GSM27853 extract total_RNA GSE1639GSM27853 LE.biotin biotin synthetic_RNA Affymetrix:Protocol:Hybridization-EukGE-WS2v4 rpd3 delete H4(K5,8,12,16Q) 1 A-AFFY-27 P-AFFY-6 rpd3Δ H4(K5,8,12,16Q) rpd3 delete H4(K5,8,12,16Q) 1 GSM27853.CEL ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-1639/E-GEOD-1639.raw.1.zip E-GEOD-1639-processed-data-1442068989.txt ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-1639/E-GEOD-1639.processed.1.zip GSE1639GSM27845 H3(K4,9,14,18,23,27Q) CLY460 Saccharomyces cerevisiae EFO http://purl.org/obo/owl/NCBITaxon#NCBITaxon_4932 GSE1639GSM27845 sample GSE1639GSM27845 extract total_RNA GSE1639GSM27845 LE.biotin biotin synthetic_RNA Affymetrix:Protocol:Hybridization-EukGE-WS2v4 H3(K4,9,14,18,23,27Q) 2 A-AFFY-27 P-AFFY-6 H3(K4,9,14,18,23,27Q) H3(K4,9,14,18,23,27Q) 2 GSM27845.CEL ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-1639/E-GEOD-1639.raw.1.zip E-GEOD-1639-processed-data-1442068989.txt ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-1639/E-GEOD-1639.processed.1.zip GSE1639GSM27844 H3(K4,9,14,18,23,27Q) CLY460 Saccharomyces cerevisiae EFO http://purl.org/obo/owl/NCBITaxon#NCBITaxon_4932 GSE1639GSM27844 sample GSE1639GSM27844 extract total_RNA GSE1639GSM27844 LE.biotin biotin synthetic_RNA Affymetrix:Protocol:Hybridization-EukGE-WS2v4 H3(K4,9,14,18,23,27Q) 1 A-AFFY-27 P-AFFY-6 H3(K4,9,14,18,23,27Q) H3(K4,9,14,18,23,27Q) 1 GSM27844.CEL ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-1639/E-GEOD-1639.raw.1.zip E-GEOD-1639-processed-data-1442068989.txt ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-1639/E-GEOD-1639.processed.1.zip GSE1639GSM27841 rpd3Δ NSY430 Saccharomyces cerevisiae EFO http://purl.org/obo/owl/NCBITaxon#NCBITaxon_4932 GSE1639GSM27841 sample GSE1639GSM27841 extract total_RNA GSE1639GSM27841 LE.biotin biotin synthetic_RNA Affymetrix:Protocol:Hybridization-EukGE-WS2v4 Rpd3 deletion 2 A-AFFY-27 P-AFFY-6 rpd3Δ Rpd3 deletion 2 GSM27841.CEL ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-1639/E-GEOD-1639.raw.1.zip E-GEOD-1639-processed-data-1442068989.txt ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-1639/E-GEOD-1639.processed.1.zip GSE1639GSM27839 wild_type NSY429 Saccharomyces cerevisiae EFO http://purl.org/obo/owl/NCBITaxon#NCBITaxon_4932 GSE1639GSM27839 sample GSE1639GSM27839 extract total_RNA GSE1639GSM27839 LE.biotin biotin synthetic_RNA Affymetrix:Protocol:Hybridization-EukGE-WS2v4 Wild type 3 A-AFFY-27 P-AFFY-6 wild_type Wild type 3 GSM27839.CEL ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-1639/E-GEOD-1639.raw.1.zip E-GEOD-1639-processed-data-1442068989.txt ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-1639/E-GEOD-1639.processed.1.zip GSE1639GSM27854 rpd3Δ H4(K5,8,12,16Q) RMY492 Saccharomyces cerevisiae EFO http://purl.org/obo/owl/NCBITaxon#NCBITaxon_4932 GSE1639GSM27854 sample GSE1639GSM27854 extract total_RNA GSE1639GSM27854 LE.biotin biotin synthetic_RNA Affymetrix:Protocol:Hybridization-EukGE-WS2v4 rpd3 delete H4(K5,8,12,16Q) 2 A-AFFY-27 P-AFFY-6 rpd3Δ H4(K5,8,12,16Q) rpd3 delete H4(K5,8,12,16Q) 2 GSM27854.CEL ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-1639/E-GEOD-1639.raw.1.zip E-GEOD-1639-processed-data-1442068989.txt ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-1639/E-GEOD-1639.processed.1.zip GSE1639GSM27850 H4(K5,8,12,16Q) RMY491 Saccharomyces cerevisiae EFO http://purl.org/obo/owl/NCBITaxon#NCBITaxon_4932 GSE1639GSM27850 sample GSE1639GSM27850 extract total_RNA GSE1639GSM27850 LE.biotin biotin synthetic_RNA Affymetrix:Protocol:Hybridization-EukGE-WS2v4 H4(K5,8,12,16Q) 2 A-AFFY-27 P-AFFY-6 H4(K5,8,12,16Q) H4(K5,8,12,16Q) 2 GSM27850.CEL ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-1639/E-GEOD-1639.raw.1.zip E-GEOD-1639-processed-data-1442068989.txt ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-1639/E-GEOD-1639.processed.1.zip GSE1639GSM27852 rpd3Δ H3delta(1-28) NSY459 Saccharomyces cerevisiae EFO http://purl.org/obo/owl/NCBITaxon#NCBITaxon_4932 GSE1639GSM27852 sample GSE1639GSM27852 extract total_RNA GSE1639GSM27852 LE.biotin biotin synthetic_RNA Affymetrix:Protocol:Hybridization-EukGE-WS2v4 rpd3 delete H3delta(1-28) 2 A-AFFY-27 P-AFFY-6 rpd3Δ H3delta(1-28) rpd3 delete H3delta(1-28) 2 GSM27852.CEL ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-1639/E-GEOD-1639.raw.1.zip E-GEOD-1639-processed-data-1442068989.txt ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-1639/E-GEOD-1639.processed.1.zip GSE1639GSM27840 rpd3Δ NSY430 Saccharomyces cerevisiae EFO http://purl.org/obo/owl/NCBITaxon#NCBITaxon_4932 GSE1639GSM27840 sample GSE1639GSM27840 extract total_RNA GSE1639GSM27840 LE.biotin biotin synthetic_RNA Affymetrix:Protocol:Hybridization-EukGE-WS2v4 rpd3 deletion 1 A-AFFY-27 P-AFFY-6 rpd3Δ rpd3 deletion 1 GSM27840.CEL ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-1639/E-GEOD-1639.raw.1.zip E-GEOD-1639-processed-data-1442068989.txt ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-1639/E-GEOD-1639.processed.1.zip GSE1639GSM27851 rpd3Δ H3delta(1-28) NSY459 Saccharomyces cerevisiae EFO http://purl.org/obo/owl/NCBITaxon#NCBITaxon_4932 GSE1639GSM27851 sample GSE1639GSM27851 extract total_RNA GSE1639GSM27851 LE.biotin biotin synthetic_RNA Affymetrix:Protocol:Hybridization-EukGE-WS2v4 rpd3 delete H3delta(1-28) 1 A-AFFY-27 P-AFFY-6 rpd3Δ H3delta(1-28) rpd3 delete H3delta(1-28) 1 GSM27851.CEL ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-1639/E-GEOD-1639.raw.1.zip E-GEOD-1639-processed-data-1442068989.txt ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-1639/E-GEOD-1639.processed.1.zip GSE1639GSM27849 H4(K5,8,12,16Q) RMY491 Saccharomyces cerevisiae EFO http://purl.org/obo/owl/NCBITaxon#NCBITaxon_4932 GSE1639GSM27849 sample GSE1639GSM27849 extract total_RNA GSE1639GSM27849 LE.biotin biotin synthetic_RNA Affymetrix:Protocol:Hybridization-EukGE-WS2v4 H4(K5,8,12,16Q) 1 A-AFFY-27 P-AFFY-6 H4(K5,8,12,16Q) H4(K5,8,12,16Q) 1 GSM27849.CEL ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-1639/E-GEOD-1639.raw.1.zip E-GEOD-1639-processed-data-1442068989.txt ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-1639/E-GEOD-1639.processed.1.zip GSE1639GSM27846 H3(K4,9,14,18,23,27Q) CLY460 Saccharomyces cerevisiae EFO http://purl.org/obo/owl/NCBITaxon#NCBITaxon_4932 GSE1639GSM27846 sample GSE1639GSM27846 extract total_RNA GSE1639GSM27846 LE.biotin biotin synthetic_RNA Affymetrix:Protocol:Hybridization-EukGE-WS2v4 H3(K4,9,14,18,23,27Q) 3 A-AFFY-27 P-AFFY-6 H3(K4,9,14,18,23,27Q) H3(K4,9,14,18,23,27Q) 3 GSM27846.CEL ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-1639/E-GEOD-1639.raw.1.zip E-GEOD-1639-processed-data-1442068989.txt ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-1639/E-GEOD-1639.processed.1.zip