Source Name	Characteristics [Organism]	Description	Comment [Sample_characteristics]	Comment [Sample_source_name]	Sample Name	Protocol REF	Extract Name	Material Type	Protocol REF	Labeled Extract Name	Label	Material Type	Hybridization Name	Array Design REF	Protocol REF	Scan Name	Array Data File	Comment [ArrayExpress FTP file]	Protocol REF	Derived Array Data Matrix File	Comment [Derived ArrayExpress FTP file]
GSE12314GSM309530	Glycine max	150mg RNAiSP- soybean cotyledon:  storage protein suppression comparison. 150mg RNAiSP cotyledon, greenhouse grown	150mg RNAiSP cotyledon, greenhouse grown	150mg RNAiSP- soybean cotyledon	GSE12314GSM309530 sample	P-G12314-2	GSE12314GSM309530 extract	total_RNA	P-G12314-1	GSE12314GSM309530 LE biotin	biotin	synthetic_RNA	storage protein suppression expt, RNAi biol rep2, tech rep1	A-AFFY-59	P-AFFY-6	GSM309530.CEL	GSM309530.CEL	ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-12314/E-GEOD-12314.raw.1.zip	Affymetrix:Protocol:ExpressionStat	E-GEOD-12314-processed-data-1684638422.txt	ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-12314/E-GEOD-12314.processed.1.zip
GSE12314GSM309557	Glycine max	150 mg RNAi cotyledon with suppressed storage proteins:  3 samples: 1 control, 2 biological samples jack control, 2 tech replicates 2 RNAi samples, 2 tech replicates each. 150 mg transgenic soybean cotyledon with both storage proteins suppressed, greenhouse grown	150 mg transgenic soybean cotyledon with both storage proteins suppressed, greenhouse grown	150 mg RNAi cotyledon with suppressed storage proteins	GSE12314GSM309557 sample	P-G12314-3	GSE12314GSM309557 extract	total_RNA	P-G12314-1	GSE12314GSM309557 LE biotin	biotin	synthetic_RNA	storage protein suppression expt, RNAi biol rep1, tech rep2	A-AFFY-59	P-AFFY-6	GSM309557.CEL	GSM309557.CEL	ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-12314/E-GEOD-12314.raw.1.zip	Affymetrix:Protocol:ExpressionStat	E-GEOD-12314-processed-data-1684638422.txt	ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-12314/E-GEOD-12314.processed.1.zip
GSE12314GSM309529	Glycine max	150mg RNAiSP- cotyledon biol rep 1 tech rep1:  storage protein suppression comparison. 150mg RNAiSP suppressed soybean cotyledon biol rep 1 tech rep1	150mg RNAiSP suppressed soybean cotyledon biol rep 1 tech rep1	150mg RNAiSP- cotyledon biol rep 1 tech rep1	GSE12314GSM309529 sample	P-G12314-2	GSE12314GSM309529 extract	total_RNA	P-G12314-1	GSE12314GSM309529 LE biotin	biotin	synthetic_RNA	storage protein suppression expt, RNAi biol rep1, tech rep1	A-AFFY-59	P-AFFY-6	GSM309529.CEL	GSM309529.CEL	ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-12314/E-GEOD-12314.raw.1.zip	Affymetrix:Protocol:ExpressionStat	E-GEOD-12314-processed-data-1684638422.txt	ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-12314/E-GEOD-12314.processed.1.zip
GSE12314GSM309531	Glycine max	150mg cotyledon RNAiSP biol rep 2 tech rep 2:  storage protein suppression comparison. 150mg cotyledon RNAiSP biol rep 2 tech rep 2	150mg cotyledon RNAiSP biol rep 2 tech rep 2	150mg cotyledon RNAiSP biol rep 2 tech rep 2	GSE12314GSM309531 sample	P-G12314-2	GSE12314GSM309531 extract	total_RNA	P-G12314-1	GSE12314GSM309531 LE biotin	biotin	synthetic_RNA	storage protein suppression expt, RNAi biol rep2, tech rep2	A-AFFY-59	P-AFFY-6	GSM309531.CEL	GSM309531.CEL	ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-12314/E-GEOD-12314.raw.1.zip	Affymetrix:Protocol:ExpressionStat	E-GEOD-12314-processed-data-1684638422.txt	ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-12314/E-GEOD-12314.processed.1.zip
GSE12314GSM309528	Glycine max	150mg nontransgenic soybean cotyledon:  storage protein suppression comparison. 150mg soybean cotyledon, control tech rep2	150mg soybean cotyledon, control tech rep2	150mg nontransgenic soybean cotyledon	GSE12314GSM309528 sample	P-G12314-2	GSE12314GSM309528 extract	total_RNA	P-G12314-1	GSE12314GSM309528 LE biotin	biotin	synthetic_RNA	storage protein suppression expt, control tech rep2	A-AFFY-59	P-AFFY-6	GSM309528.CEL	GSM309528.CEL	ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-12314/E-GEOD-12314.raw.1.zip	Affymetrix:Protocol:ExpressionStat	E-GEOD-12314-processed-data-1684638422.txt	ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-12314/E-GEOD-12314.processed.1.zip
GSE12314GSM309527	Glycine max	150mg cotyledon, wt nontransgenic control :  storage protein suppression comparison. 150mg soybean cotyledon, nontransgenic greenhouse grown	150mg soybean cotyledon, nontransgenic greenhouse grown	150mg cotyledon, wt nontransgenic control	GSE12314GSM309527 sample	P-G12314-2	GSE12314GSM309527 extract	total_RNA	P-G12314-1	GSE12314GSM309527 LE biotin	biotin	synthetic_RNA	storage protein suppression expt, control tech rep1	A-AFFY-59	P-AFFY-6	GSM309527.CEL	GSM309527.CEL	ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-12314/E-GEOD-12314.raw.1.zip	Affymetrix:Protocol:ExpressionStat	E-GEOD-12314-processed-data-1684638422.txt	ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-12314/E-GEOD-12314.processed.1.zip