Source Name Characteristics [Genotype] Characteristics [Phenotype] Characteristics [Observation] Characteristics [Organism] Term Source REF Term Accession Number Characteristics [DevelopmentalStage] Characteristics [Ecotype] Characteristics [Genotype] Characteristics [Genotype] Characteristics [ABRC seed stock id] Provider Sample Name Protocol REF Parameter Value [Amplification] Parameter Value [Extracted product] Extract Name Material Type Protocol REF Parameter Value [Amount of nucleic acid labeled] Parameter Value [Used Label] Parameter Value [Amplification] Labeled Extract Name Label Material Type Protocol REF Parameter Value [Temperature] Unit [TemperatureUnit] Parameter Value [Volume] Unit [VolumeUnit] Parameter Value [Time] Unit [TimeUnit] Parameter Value [Quantity of label target used] Unit [MassUnit] Parameter Value [Chamber type] Hybridization Name Array Design REF Comment [Array Design URI] Protocol REF Factor Value [genotype] Scan Name Array Data File Comment [ArrayExpress FTP file] Protocol REF Derived Array Data Matrix File Comment [Derived ArrayExpress FTP file] fad3-2fad7-2fad8 AT3G11170 - FAD7 - FATTY ACID DESATURASE 7 male sterile trienoic fatty acid deficient mutant Arabidopsis thaliana EFO http://purl.org/obo/owl/NCBITaxon#NCBITaxon_3702 3.90 Boyes key Columbia-0 AT2G29980 - FAD3 - FATTY ACID DESATURASE 3 AT5G05580 - FAD8 - FATTY ACID DESATURASE 8 other[from John Browse laboratory] fad3-2fad7-2fad8 P-CAGE-25009 none total RNA E_fad3-2fad7-2fad8 A total_RNA P-CAGE-25015 100 Cy5 none L_fad3-2fad7-2fad8 A Cy5 total_RNA P-CAGE-25011 64 degree_C 100 uL 16 h 100 ug Arrylt Hybridization Casette H_WTA_fad3-2fad7-2fad8 A A-MEXP-599 http://www.ebi.ac.uk/aerep/result?queryFor=PhysicalArrayDesign&aAccession=A-MEXP-599 P-CAGE-25014 fad3-2fad7-2fad8 H_WTA_fad3-2fad7-2fad8 A rawdata_Col0_vs_fad378_A.txt ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/ATMX/E-ATMX-37/E-ATMX-37.raw.1.zip P-CAGE-25013 E-ATMX-37-processed-data-1583036031.txt ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/ATMX/E-ATMX-37/E-ATMX-37.processed.1.zip WT wild_type Arabidopsis thaliana EFO http://purl.org/obo/owl/NCBITaxon#NCBITaxon_3702 3.90 Boyes key Columbia-0 CS60000 ABRC WT P-CAGE-25009 none total RNA E_WT A total_RNA P-CAGE-25010 100 Cy3 none L_WT A Cy3 total_RNA P-CAGE-25011 64 degree_C 100 uL 16 h 100 ug Arrylt Hybridization Casette H_WTA_fad3-2fad7-2fad8 A A-MEXP-599 http://www.ebi.ac.uk/aerep/result?queryFor=PhysicalArrayDesign&aAccession=A-MEXP-599 P-CAGE-25014 wild_type H_WTA_fad3-2fad7-2fad8 A rawdata_Col0_vs_fad378_A.txt ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/ATMX/E-ATMX-37/E-ATMX-37.raw.1.zip P-CAGE-25013 E-ATMX-37-processed-data-1583036031.txt ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/ATMX/E-ATMX-37/E-ATMX-37.processed.1.zip WT wild_type Arabidopsis thaliana EFO http://purl.org/obo/owl/NCBITaxon#NCBITaxon_3702 3.90 Boyes key Columbia-0 CS60000 ABRC WT P-CAGE-25009 none total RNA E_WT C total_RNA P-CAGE-25010 100 Cy3 none L_WT C Cy3 total_RNA P-CAGE-25011 64 degree_C 100 uL 16 h 100 ug Arrylt Hybridization Casette H_WTC_fad3-2fad7-2fad8C A-MEXP-599 http://www.ebi.ac.uk/aerep/result?queryFor=PhysicalArrayDesign&aAccession=A-MEXP-599 P-CAGE-25014 wild_type H_WTC_fad3-2fad7-2fad8C rawdata_Col0_vs_fad378_C.txt ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/ATMX/E-ATMX-37/E-ATMX-37.raw.1.zip P-CAGE-25013 E-ATMX-37-processed-data-1583036031.txt ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/ATMX/E-ATMX-37/E-ATMX-37.processed.1.zip fad3-2fad7-2fad8 AT3G11170 - FAD7 - FATTY ACID DESATURASE 7 male sterile trienoic fatty acid deficient mutant Arabidopsis thaliana EFO http://purl.org/obo/owl/NCBITaxon#NCBITaxon_3702 3.90 Boyes key Columbia-0 AT2G29980 - FAD3 - FATTY ACID DESATURASE 3 AT5G05580 - FAD8 - FATTY ACID DESATURASE 8 other[from John Browse laboratory] fad3-2fad7-2fad8 P-CAGE-25009 none total RNA E_fad3-2fad7-2fad8 C total_RNA P-CAGE-25015 100 Cy5 none L_fad3-2fad7-2fad8 C Cy5 total_RNA P-CAGE-25011 64 degree_C 100 uL 16 h 100 ug Arrylt Hybridization Casette H_WTC_fad3-2fad7-2fad8C A-MEXP-599 http://www.ebi.ac.uk/aerep/result?queryFor=PhysicalArrayDesign&aAccession=A-MEXP-599 P-CAGE-25014 fad3-2fad7-2fad8 H_WTC_fad3-2fad7-2fad8C rawdata_Col0_vs_fad378_C.txt ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/ATMX/E-ATMX-37/E-ATMX-37.raw.1.zip P-CAGE-25013 E-ATMX-37-processed-data-1583036031.txt ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/ATMX/E-ATMX-37/E-ATMX-37.processed.1.zip WT wild_type Arabidopsis thaliana EFO http://purl.org/obo/owl/NCBITaxon#NCBITaxon_3702 3.90 Boyes key Columbia-0 CS60000 ABRC WT P-CAGE-25009 none total RNA E_WT B total_RNA P-CAGE-25010 100 Cy3 none L_WT B Cy3 total_RNA P-CAGE-25011 64 degree_C 100 uL 16 h 100 ug Arrylt Hybridization Casette H_WTB_fad3-2fad7-2fad8B A-MEXP-599 http://www.ebi.ac.uk/aerep/result?queryFor=PhysicalArrayDesign&aAccession=A-MEXP-599 P-CAGE-25014 wild_type H_WTB_fad3-2fad7-2fad8B rawdata_Col0_vs_fad378_B.txt ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/ATMX/E-ATMX-37/E-ATMX-37.raw.1.zip P-CAGE-25013 E-ATMX-37-processed-data-1583036031.txt ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/ATMX/E-ATMX-37/E-ATMX-37.processed.1.zip fad3-2fad7-2fad8 AT3G11170 - FAD7 - FATTY ACID DESATURASE 7 male sterile trienoic fatty acid deficient mutant Arabidopsis thaliana EFO http://purl.org/obo/owl/NCBITaxon#NCBITaxon_3702 3.90 Boyes key Columbia-0 AT2G29980 - FAD3 - FATTY ACID DESATURASE 3 AT5G05580 - FAD8 - FATTY ACID DESATURASE 8 other[from John Browse laboratory] fad3-2fad7-2fad8 P-CAGE-25009 none total RNA E_fad3-2fad7-2fad8 B total_RNA P-CAGE-25015 100 Cy5 none L_fad3-2fad7-2fad8 B Cy5 total_RNA P-CAGE-25011 64 degree_C 100 uL 16 h 100 ug Arrylt Hybridization Casette H_WTB_fad3-2fad7-2fad8B A-MEXP-599 http://www.ebi.ac.uk/aerep/result?queryFor=PhysicalArrayDesign&aAccession=A-MEXP-599 P-CAGE-25014 fad3-2fad7-2fad8 H_WTB_fad3-2fad7-2fad8B rawdata_Col0_vs_fad378_B.txt ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/ATMX/E-ATMX-37/E-ATMX-37.raw.1.zip P-CAGE-25013 E-ATMX-37-processed-data-1583036031.txt ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/ATMX/E-ATMX-37/E-ATMX-37.processed.1.zip