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AccessionTitleTypeOrganismAssaysReleasedProcessedRawViewsAtlas
Single-cell RNA-seq analysis of human pancreas from healthy individuals and type 2 diabetes patients
RNA-seq of coding RNA from single cells
Homo sapiens
3514
22/09/2016
ENA
3433
Whole-islet RNA-sequencing analysis of human pancreas from healthy individuals and type 2 diabetes patients
RNA-seq of coding RNA
Homo sapiens
7
22/09/2016
ENA
1009
Transcription profiling of mouse osteoblasts with mesenchymal-specific homozygous deletion of Sbds against wild type counterparts in a model studying human leukemia predisposition syndromes
transcription profiling by array
Mus musculus
6
22/09/2016
-
241
Comparative genomic hybridization by array of two epithelial cell lines (16HBE14o- and T84) and control DNA from European Hapmap cell lines
comparative genomic hybridization by array
Homo sapiens
2
22/09/2016
-
321
-
Gene expression changes in the periventricular white matter of neonatal piglets at a defined 48h time point following a hypoxic-ischemic insult: a comparison of piglets left untreated and those treated with a remote post-conditioning stimulus applied to the hind leg immediately after the insult
transcription profiling by array
Sus scrofa
16
21/09/2016
-
121
-
Genotyping of SNP array in individuals with San ancestry in southeastern Africa
genotyping by array
Homo sapiens
16
21/09/2016
-
134
-
Methylome profiling of glioblastoma biopsies obtained by neuro-navigation in four distinct areas for 10 patients (necrotic zone, tumor zone, interface, and peripheral brain zone)
methylation profiling by array
Homo sapiens
23
19/09/2016
270
-
aCGH profiling of glioblastoma biopsies obtained by neuro-navigation in four distinct areas for 10 patients (necrotic zone, tumor zone, interface, and peripheral brain zone)
comparative genomic hybridization by array
Homo sapiens
33
19/09/2016
-
245
-
Transcriptome profiling of glioblastoma biopsies obtained by neuro-navigation in four distinct areas for 10 patients (necrotic zone, tumor zone, interface, and peripheral brain zone)
transcription profiling by array
Homo sapiens
37
19/09/2016
-
349
-
RNA-seq analysis of Helicobacter cinaedi ATCC BAA-847 under microaerobic and aerobic culture conditions
RNA-seq of coding RNA
Helicobacter cinaedi CCUG 18818 = ATCC BAA-847
39
19/09/2016
ENA
201
-
Transcription profiling by array of Escherichia coli O157:H7 Sakai subjected to an abrupt downshift in temperature and water activity at multiple time points
transcription profiling by array
Escherichia coli
27
16/09/2016
290
-
ChIP-Seq of LET-418::3xFLAG in mixed stage early C.elegans embryos
ChIP-seq
Caenorhabditis elegans
3
12/09/2016
ENA
241
-
Transcription profiling by high throughput sequencing of Caenorhabditis elegans Mi2-depleted embryos at 24- and 100-cell stages
RNA-seq of coding RNA
Caenorhabditis elegans
23
12/09/2016
-
ENA
229
ATAC-seq of Oesophageal Cell Lines
DNA-seq
Homo sapiens
3
12/09/2016
ENA
278
-
Transcription profiling of poplar (Populus x canescens) leaves and roots under phosphate deprivation
transcription profiling by array
Populus tremula x Populus alba
18
11/09/2016
264
-
Gene expression profile of Huh7 cells upon knock-down of FOXA2 or FOXA2-DS-S
transcription profiling by array
Homo sapiens
9
10/09/2016
-
247
-
Whole genome sequencing of oesophageal tumour tissue and peripheral blood mononuclear cells (PBMC) from a patient with oesophageal adenocarcinoma
DNA-seq
Homo sapiens
2
09/09/2016
-
ENA
314
-
ChIP-seq experiment on mouse neural stem cells (NS5 cell line) to generate a genome-wide map of RBPJ binding to chromatin
ChIP-seq
Mus musculus
1
09/09/2016
ENA
241
-
Transcription profiling by array of NS5 mouse neuronal progenitor cells overexpressing MyT1
transcription profiling by array
Mus musculus
6
09/09/2016
231
RNA-seq of Notch signalling inhibition in NS5
RNA-seq of coding RNA
Mus musculus
2
09/09/2016
-
225
-
ChIP-Seq MyT1-HA in NS5
ChIP-seq
Mus musculus
1
09/09/2016
ENA
207
-
Lipid biosynthesis coordinates a Mitochondrial to Cytosolic Stress Response
transcription profiling by array
Caenorhabditis elegans
12
08/09/2016
219
-
DNA methylation alternations in the offspring adipose from chromium restriction diet dams
methylation profiling by array
Mus musculus
6
08/09/2016
178
-
ChIP-seq-based analysis of differential K27me3 coverage in neuroblastoma cell lines treated with epigenetic drugs
ChIP-seq
Homo sapiens
12
08/09/2016
-
219
-
Global transcriptome analysis in the MYCN-amplified neuroblastoma cell line IMR5-75 upon inducible MYCN-knockdown
RNA-seq of coding RNA
Homo sapiens
12
08/09/2016
-
-
109
-
DNA methylation analysis of neuroblastoma cell lines treated with epigenetic drugs
methylation profiling by array
Homo sapiens
8
08/09/2016
199
-
RNA expression analysis of neuroblastoma cell lines treated with epigenetic drugs
RNA-seq of coding RNA
Homo sapiens
16
08/09/2016
-
-
115
-
Strand-oriented RNAseq of LNCaP prostate cancer cells in culture for 48 h in the absence of androgen
RNA-seq of coding RNA
Homo sapiens
2
08/09/2016
-
-
140
-
MiR-148a Functions as a Tumor Suppressor by Targeting CCK-BR via Inactivating STAT3 and Akt in Human Gastric Cancer
transcription profiling by array
Homo sapiens
56
08/09/2016
376
-
HIPSTR lncRNA knockdown in HEK293 and H1BP cells
transcription profiling by array
Homo sapiens
18
08/09/2016
-
180
-
HIPSTR lncRNA knockdown in H1BP cells
transcription profiling by array
Homo sapiens
9
08/09/2016
-
148
-
HIPSTR lncRNA knockdown in HEK293 cells
transcription profiling by array
Homo sapiens
9
08/09/2016
-
148
-
Primary neuroblastoma tumors
transcription profiling by array, methylation profiling by array
Homo sapiens
210
08/09/2016
380
-
RNA expression data from primary neuroblastoma tumors
transcription profiling by array
Homo sapiens
105
08/09/2016
222
-
DNA methylation data from primary neuroblastoma tumors
methylation profiling by array
Homo sapiens
105
08/09/2016
235
-
Regulation of the biofilm-specific genes circuitry in Candida albicans by a novel histone H3 variant
transcription profiling by array
Candida albicans
8
08/09/2016
156
-
Gene expression analysis of human adenomas
RNA-seq of coding RNA
Homo sapiens
14
08/09/2016
-
-
229
-
Regulators of NRAS-mediated transformation and melanoma tumor maintenance
transcription profiling by array
Homo sapiens
6
08/09/2016
-
330
-
Treatment with GC/RA and combination with AZA/SAHA in MYC amplified and BRG1 mutant lung cancer cell lines
transcription profiling by array, methylation profiling by array
Homo sapiens
102
08/09/2016
335
-
Identification of expresion patterns after treatment with GC/RA and combination with AZA/SAHA in MYC amplified and BRG1 mutant lung cancer cell lines
transcription profiling by array
Homo sapiens
81
08/09/2016
237
-
Patterns of changes in DNA global methylation following the treatment with GC/RA and with GC/RA plus AZA/SAHA in MYC amplified and BRG1 mutant lung cancer cell lines
methylation profiling by array
Homo sapiens
21
08/09/2016
-
159
-
Tbr2 and Neurog2 occupancy and transcriptional profiling of control and Tbr2 knockout E14.5 cerebral cortices
ChIP-seq, transcription profiling by array
Mus musculus
9
08/09/2016
125
-
Tbr2 and Neurog2 transcription factor binding sites in E14.5 WT cerebral cortices
ChIP-seq
Mus musculus
3
08/09/2016
-
133
-
Transcriptional profiling of E14.5 control and Tbr2 fl/fl;Foxg1::Cre cortices
transcription profiling by array
Mus musculus
6
08/09/2016
103
-
Transcriptional targets of oncogenic RAS proteins that mediate their ability to induce cellular transformation
transcription profiling by array
Homo sapiens
12
08/09/2016
-
259
-
Regulation of GLI underlies a role for BET bromodomains in pancreatic cancer growth and the tumor microenvironment
transcription profiling by array
Homo sapiens
40
08/09/2016
-
231
-
Chromatin maps of human ASXL1, FOXK1 and O-GlcNAc
ChIP-seq
Homo sapiens
5
08/09/2016
-
108
-
Cardiac aldosterone regulated genes in mice
transcription profiling by array
Mus musculus
10
08/09/2016
120
-
Transcription profiling of 3T3-L1 pre-adipocytes treated with Alda-1 to study the role of the PKCepislon-ALDH2 pathway in adipocyte differentiation
transcription profiling by array
Mus musculus
2
07/09/2016
-
175
-
RNA-seq of human HeLa cell
RNA-seq of coding RNA
Homo sapiens
2
07/09/2016
-
155
-
Using AmpliSeq we have performed quantitative analysis of 20,803 genes in Negative control precursor-miR (NC-Pre-miR) and pre-miR-17 transfected Rheumatoid arthritis Synovial Fibroblasts (RASFs)
RNA-seq of coding RNA
Homo sapiens
4
07/09/2016
-
-
143
-
MODD mediates deactivation and degradation of OsbZIP46 to negatively regulate ABA signaling and drought resistance in rice
RNA-seq of coding RNA
Oryza sativa Japonica Group
4
07/09/2016
-
151
-
Cytokine-independent detection of antigen-specific germinal center T follicular helper (Tfh) cells in immunized non-human primates using a live cell Activation Induced Marker (AIM) technique
RNA-seq of coding RNA
Macaca mulatta
5
07/09/2016
-
-
113
-
ADTRP siRNA Microarray Data in HepG2 Cell Line
transcription profiling by array
Homo sapiens
6
07/09/2016
131
-
Differential production of Type I IFN determines the reciprocal levels of IL-10 and proinflammatory cytokines produced by C57BL/6 and BALB/c macrophages
transcription profiling by array
Mus musculus
36
07/09/2016
-
138
-
Gene expression linked to sleep homeostasis in murine cortex
transcription profiling by array
Mus musculus
65
07/09/2016
148
-
m6A RNA methylation promotes XIST-mediated transcriptional repression
other
Homo sapiens
7
07/09/2016
-
126
-
Characterization of a P-REX1 gene signature in breast cancer cells
transcription profiling by array
Homo sapiens
24
07/09/2016
237
-
Effect of anti-IL-15 administration on T cell and NK cell homeostasis in rhesus macaques
RNA-seq of coding RNA
Macaca mulatta
72
07/09/2016
158
-
Effect of anti-IL-15 administration on T cell and NK cell homeostasis in rhesus macaques (TEM)
transcription profiling by array
Macaca mulatta
23
07/09/2016
110
-
Effect of anti-IL-15 administration on T cell and NK cell homeostasis in rhesus macaques (TCM)
transcription profiling by array
Macaca mulatta
49
07/09/2016
164
-
Effect of fipronil on the thyroid gland transcriptome in the rat
transcription profiling by array
Rattus norvegicus
20
07/09/2016
121
-
RNA-seq analysis of IMQ-treated wt and Trex2-/- skin
RNA-seq of coding RNA
Mus musculus
11
07/09/2016
-
-
103
-
The bromodomain protein BRD4 regulates splicing during heat shock
RNA-seq of coding RNA
Homo sapiens
8
07/09/2016
-
-
102
-
Skeletal muscle derived stem cell implantation therapy in a rat model of erectile dysfunction
transcription profiling by array
Rattus norvegicus
2
07/09/2016
102
-
Genome wide Affymetric Microarray analysis for RIPK1 dependent inflammatory changes in Bone Marrow Derived Macrophages (BMDMs)
transcription profiling by array
Mus musculus
4
07/09/2016
135
-
The Smaug RNA-binding protein is essential for microRNA synthesis during the Drosophila maternal-to-zygotic transition
RNA-seq of non coding RNA
Drosophila melanogaster
18
06/09/2016
-
97
-
Unexpected role of interferon-g in regulating neuronal connectivity and social behavior
RNA-seq of coding RNA
Mus musculus
6
06/09/2016
-
-
87
-
Brain transcriptome of honeybees (Apis mellifera) infected by Nosema ceranae and/or Black Queen Cell Virus
RNA-seq of coding RNA
Apis mellifera
11
06/09/2016
-
-
99
-
Integrative genomics outlines a biphasic glucose response and a ChREBP-RORγ axis regulating proliferation in β-cells
ChIP-seq, RNA-seq of coding RNA
Rattus norvegicus
54
06/09/2016
-
142
-
DNA Microarray Platform for Detection and Surveillance of Viruses Transmitted by Small Mammals and Arthropods
transcription profiling by array
Aedes aegypti, Aedes albopictus, Bussuquara virus, Cacipacore virus, Chikungunya virus, Chlorocebus sabaeus, Dengue virus, Dengue virus 1, Dengue virus 2, Dengue virus 3, Dengue virus 4, Flaviviridae, Flavivirus, Guaroa virus, Homo sapiens, Iguape virus, Ilheus virus, Mayaro virus, Mucambo virus, Oropouche virus, Piry virus, Rhabdoviridae, Rio Mamore virus, Rocio virus, St. Louis encephalitis virus, Togaviridae, West Nile virus, Yellow fever virus, Zika virus
87
06/09/2016
194
-
DNA Microarray Platform for Detection and Surveillance of Viruses Transmitted by Small Mammals and Arthropods
transcription profiling by array
Aedes albopictus, Chikungunya virus, Dengue virus 1, Dengue virus 2, Dengue virus 3, Dengue virus 4, Zika virus
7
06/09/2016
104
-
Genetic ancestry and natural selection drive population differences in immune responses to pathogens in humans
RNA-seq of coding RNA
Homo sapiens
503
06/09/2016
-
313
-
Circadian Epigenomic Control of Skeletal Muscle Fuel Metabolism by HDAC3
ChIP-seq, other, RNA-seq of coding RNA
Mus musculus
14
06/09/2016
-
121
-
Next generation sequencing comparing effects of vehicle, PTH, and YKL-05-093 in Ocy454 cells
RNA-seq of coding RNA
Mus musculus
6
06/09/2016
-
103
-
Next generation sequencing analysis of epididymal adipose tissue (III)
RNA-seq of coding RNA
Mus musculus
8
06/09/2016
-
-
130
-
Next generation sequencing analysis of epididymal adipose tissue (II)
RNA-seq of coding RNA
Mus musculus
9
06/09/2016
-
-
123
-
A pre-mRNA Alternative Splicing Program Promotes Adipose Tissue Thermogenesis
RNA-seq of coding RNA
Mus musculus
23
06/09/2016
-
-
82
-
Next generation sequencing analysis of epididymal adipose tissue (I)
RNA-seq of coding RNA
Mus musculus
6
06/09/2016
-
-
96
-
Desiccation Tolerance of Arabidopsis thaliana seeds
RNA-seq of coding RNA
Arabidopsis thaliana
24
06/09/2016
-
-
126
-
Genome-wide landscape and functional necessity of heart enhancers
RNA-seq of coding RNA
Mus musculus
20
06/09/2016
-
128
-
RNA-Seq of Lgr6 positive and negative cells in mouse mammary gland
RNA-seq of coding RNA
Mus musculus
4
06/09/2016
-
-
98
-
Etiology matters - Comparing Genomic DNA Methylation Patterns in Three Rat Models of Acquired Epilepsy
methylation profiling by high throughput sequencing, RNA-seq of coding RNA
Rattus norvegicus
20
06/09/2016
-
-
91
-
Etiology matters - Comparing Genomic DNA Methylation Patterns in Three Rat Models of Acquired Epilepsy (Amygdala stimulation – mRNA-seq)
RNA-seq of coding RNA
Rattus norvegicus
10
06/09/2016
-
-
86
-
Etiology matters - Comparing Genomic DNA Methylation Patterns in Three Rat Models of Acquired Epilepsy (Amygdala stimulation – MBD-seq)
methylation profiling by high throughput sequencing
Rattus norvegicus
10
06/09/2016
-
-
87
-
Etiology matters - Comparing Genomic DNA Methylation Patterns in Three Rat Models of Acquired Epilepsy
methylation profiling by high throughput sequencing, RNA-seq of coding RNA
Rattus norvegicus
20
06/09/2016
-
-
91
-
Etiology matters - Comparing Genomic DNA Methylation Patterns in Three Rat Models of Acquired Epilepsy (TBI – mRNA-seq)
RNA-seq of coding RNA
Rattus norvegicus
10
06/09/2016
-
-
85
-
Etiology matters - Comparing Genomic DNA Methylation Patterns in Three Rat Models of Acquired Epilepsy (TBI – MBD-seq)
methylation profiling by high throughput sequencing
Rattus norvegicus
10
06/09/2016
-
-
89
-
Genome-wide identification of Drought-responsive Regulatory Coding and Non-coding Transcripts from Oryza sativa L. by deep RNA sequencing
RNA-seq of coding RNA, RNA-seq of non coding RNA
Oryza sativa Indica Group
27
06/09/2016
-
-
135
-
Widespread shortening of 3' untranslated regions and increased exon inclusion characterize the human macrophage response to infection
RNA-seq of coding RNA, RNA-seq of non coding RNA
Homo sapiens
234
06/09/2016
-
217
-
Widespread shortening of 3’ untranslated regions and increased exon inclusion characterize the human macrophage response to infection [mRNA]
RNA-seq of coding RNA
Homo sapiens
198
06/09/2016
-
138
-
Widespread shortening of 3’ untranslated regions and increased exon inclusion characterize the human macrophage response to infection [miRNA]
RNA-seq of non coding RNA
Homo sapiens
36
06/09/2016
-
124
-
Gene expression profiling of mice given orally a supplement with special amino acid composition of Vespa larval saliva origin
transcription profiling by array
Mus musculus
78
06/09/2016
181
-
Gene expression profiling of mice given orally a supplement with special amino acid composition of Vespa larval saliva origin (DW vs CAAM)
transcription profiling by array
Mus musculus
36
06/09/2016
144
-
Gene expression profiling of mice given orally a supplement with special amino acid composition of Vespa larval saliva origin (DW vs VAAM)
transcription profiling by array
Mus musculus
42
06/09/2016
138
-
Gene expression induced in HEK293 by treatment with the differentiating agents all-trans retinoic acid (tRA) and N6,2'-O-dibutyryl-cAMP (cAMP)
transcription profiling by array
Homo sapiens
6
06/09/2016
-
130
-
RPF-1 transcription factor coordinates expression of developmental genes in inducible HEK293/RPF-1 stable transfectants
transcription profiling by array
Homo sapiens
12
06/09/2016
-
119
-
ChIP-chip from HEK293-RPF-1 stable transfectants expressing the HA-tagged RPF-1 transcription factor
ChIP-seq
Homo sapiens
4
06/09/2016
116
-
Identification of microRNAs and transcript targets in Jatropha seeds
RNA-seq of coding RNA, RNA-seq of non coding RNA
Jatropha curcas
4
06/09/2016
-
97
-
Slicer activity of Arabidopsis AGO1 in siRNA biogenesis and miRNA target decay
microRNA profiling by high-throughput sequencing
Arabidopsis thaliana
48
05/09/2016
-
ENA
323
-
Steinernema carpocapsae Breton small RNA sequencing insect in vitro simulation system, from "The genome, transcriptome, and proteome of the nematode Steinernema carpocapsae: evolutionary signatures of a pathogenic lifestyle"
RNA-seq of non coding RNA
Steinernema carpocapsae
6
05/09/2016
-
-
85
-
Gene expression profiles in mouse embryonic fibroblasts (MEFs) derived from BCL11B-KO mice
transcription profiling by array
Mus musculus
2
05/09/2016
150
-
DNA Microarray Platform for Detection and Surveillance of Viruses Transmitted by Small Mammals and Arthropods
transcription profiling by array
Aedes aegypti, Aedes albopictus, Bussuquara virus, Cacipacore virus, Chikungunya virus, Chlorocebus sabaeus, Dengue virus, Dengue virus 1, Dengue virus 2, Dengue virus 3, Dengue virus 4, Flaviviridae, Flavivirus, Guaroa virus, Homo sapiens, Iguape virus, Ilheus virus, Mayaro virus, Mucambo virus, Oropouche virus, Piry virus, Rhabdoviridae, Rio Mamore virus, Rocio virus, St. Louis encephalitis virus, Togaviridae, West Nile virus, Yellow fever virus
80
05/09/2016
134
-
Pre-T cells from control and Zfp36l1, Zfp36l2 double conditional knockout mice
other, RNA-seq of coding RNA
Mus musculus
15
05/09/2016
-
-
88
-
Pre-T cells from control and Zfp36l1, Zfp36l2 double conditional knockout mice. [iCLIP]
other
Mus musculus
3
05/09/2016
-
-
89
-
RNAseq of pre-T cells from control and Zfp36l1, Zfp36l2 double conditional knockout mice
RNA-seq of coding RNA
Mus musculus
12
05/09/2016
-
-
141
-
Global miRNA expression in small bowel neuroendocrine tumors (SBNET) and their lymph node/liver metastases
transcription profiling by array
Homo sapiens
90
05/09/2016
238
-
Adenosine-to-inosine RNA editing controls cathepsin S expression in atherosclerosis by enabling HuR-mediated post-transcriptional regulation
RNA-seq of coding RNA
Homo sapiens
38
05/09/2016
-
-
221
-
Effect of high CO2 levels and low temperature storage on table grapes quality harvested at two maturity stages
transcription profiling by array
Vitis vinifera
18
04/09/2016
105
-
Integrated mRNA and miRNA expression profiling in blood reveals candidate biomarkers associated with endurance exercise in horse
transcription profiling by array
Equus caballus
150
04/09/2016
145
-
Integrated mRNA and miRNA expression profiling in blood reveals candidate biomarkers associated with endurance exercise in horse (miRNA)
transcription profiling by array
Equus caballus
75
04/09/2016
138
-
Integrated mRNA and miRNA expression profiling in blood reveals candidate biomarkers associated with endurance exercise in horse (mRNA)
transcription profiling by array
Equus caballus
75
04/09/2016
127
-
Response of C2C12-hN1∆ECD to DAPT washout
RNA-seq of coding RNA
Mus musculus
3
04/09/2016
-
114
-
Differential gene expression analysis of follistain treated skeletal muscle
RNA-seq of coding RNA
Mus musculus
14
03/09/2016
-
110
-
Transcriptome profiling of 15 conditions for Escherichia coli selected from optimal experiment design, and targeted experimentation to increase functional coverage in omics dataset
RNA-seq of coding RNA
Escherichia coli BW25113, Escherichia coli str. K-12 substr. MG1655
132
03/09/2016
-
177
-
Targeted experimentation to increase functional coverage in omics dataset
RNA-seq of coding RNA
Escherichia coli BW25113
87
03/09/2016
-
100
-
Transcriptome profiling of 15 conditions for Escherichia coli selected from optimal experiment design
RNA-seq of coding RNA
Escherichia coli str. K-12 substr. MG1655
45
03/09/2016
-
202
-
Profile of miRNA in Bovine corpora lutea
transcription profiling by array
Bos taurus
6
03/09/2016
116
-
Microarray skeletal muscle miR-499 overexpressing mice
transcription profiling by array
Mus musculus
6
03/09/2016
133
-
Effect of MCMV infection on gene expression in ovaries of pregnant and non-pregnant mice
transcription profiling by array
Mus musculus
4
03/09/2016
131
-
The RNA binding protein SYNCRIP is a component of the hepatocyte exosomal machinery controlling microRNAs sorting
RNA-seq of non coding RNA
Mus musculus
30
02/09/2016
-
ENA
241
-
An integrative transcriptomic atlas of organogenesis in human embryos
RNA-seq of coding RNA
Homo sapiens
27
02/09/2016
-
493
-
An ectopic CTCF binding element disturbs Vδ usage at the mouse Tcra-Tcrd locus by regulating contact between Vδ and Dδ gene segments
other
Mus musculus
12
02/09/2016
-
106
-
Widespread natural variation of DNA methylation within angiosperms
methylation profiling by high throughput sequencing, RNA-seq of coding RNA, RNA-seq of non coding RNA
Beta vulgaris, Brachypodium distachyon, Brassica rapa, Cannabis sativa, Citrus clementina, Cucumis sativus, Erythranthe guttata, Eucalyptus grandis, Eutrema salsugineum, Fragaria vesca, Lotus japonicus, Malus domestica, Manihot esculenta, Medicago truncatula, Panicum hallii, Panicum virgatum, Populus trichocarpa, Prunus persica, Ricinus communis, Setaria viridis, Sorghum bicolor, Theobroma cacao, Vitis vinifera
34
02/09/2016
-
197
-
Progenitor Cell Marker Aldehyde Dehydrogenase 1a3 Defines a Subset of Failing Pancreatic Beta Cells in Diabetic Mice
RNA-seq of coding RNA
Mus musculus
15
02/09/2016
-
108
-
HDAC3 modulates enhancer activity to regulate terminal B cell differentiation
RNA-seq of coding RNA
Mus musculus
8
02/09/2016
-
-
91
-
Epigenetic regulation in the elderly over time
methylation profiling by array
Homo sapiens
180
02/09/2016
258
-
The analysis of differential gene expression after remote ischemic preconditioning of renal ischemia reperfusion injury
transcription profiling by array
Sus scrofa
15
02/09/2016
108
-
Promoter array characterization of AR binding sites
ChIP-chip by tiling array
Homo sapiens
2
02/09/2016
151
-
Transcriptome Profiling of Rattus norvegicus Embryonic Stem Cells by RNA-Sequencing
RNA-seq of coding RNA
Rattus norvegicus
2
02/09/2016
-
-
84
-
Expression data from Northeastern Indigenous and Large White longissimus dorsi
transcription profiling by array
Sus scrofa
6
02/09/2016
124
-
Dysregulated immune system networks in war veterans with Post-Traumatic Stress Disorder (PTSD) is an outcome of altered miRNA expression
microRNA profiling by array
Homo sapiens
12
01/09/2016
284
-
MicroRNA profiling by array of macrophages infected with Leishmania RNA virus containing Leishmania guyanensis and virus-free parasites
microRNA profiling by array
Mus musculus
8
01/09/2016
111
-
RNA-seq of coding RNA performed on the root tips of Arabidopsis rtel1 mutants and Col-1
RNA-seq of coding RNA
Arabidopsis thaliana
6
01/09/2016
-
ENA
130
Chronic activation of hepatic Nrf2 has no major effect on fatty acid and glucose metabolism in adult mice
transcription profiling by array
Mus musculus
24
01/09/2016
136
-
Transcriptome analysis of 6 hours post fertilization mecp2-null versus wild type zebrafish embryos
RNA-seq of coding RNA
Danio rerio
6
01/09/2016
-
-
96
-
Enhancer invasion shapes MYCN dependent transcriptional amplification in neuroblastoma
ChIP-seq, other, transcription profiling by array, RNA-seq of coding RNA
Homo sapiens
79
01/09/2016
362
-
Enhancer invasion shapes MYCN dependent transcriptional amplification in neuroblastoma [ATAC-seq]
other
Homo sapiens
5
01/09/2016
-
189
-
Enhancer invasion shapes MYCN dependent transcriptional amplification in neuroblastoma [ChIP-seq]
ChIP-seq
Homo sapiens
27
01/09/2016
-
166
-
High conservation in transcriptomic and proteomic response of white sturgeon to equipotent concentrations of 2,3,7,8-TCDD, PCB 77, and benzo[a]pyrene
RNA-seq of coding RNA
Acipenser transmontanus
8
01/09/2016
-
104
-
The gene expression analysis of human astrocyte exposure to anti-suprabasin antibody: identification of a novel antibody for neuropsychiatric systemic lupus erythematosus
transcription profiling by array
Homo sapiens
6
01/09/2016
145
-
Changes in RNA expression in human oral cavity carcinoma cells as a result of LDB1 reduction
RNA-seq of coding RNA
Homo sapiens
6
01/09/2016
-
-
132
-
Long‐term engraftment of primary bone marrow stroma promotes hematopoietic reconstitution after transplantation
transcription profiling by array
Mus musculus
6
01/09/2016
134
-
RNA-seq of three brain regions from schizophrenia and bipolar disorder patients and psychiatrically normal individuals
RNA-seq of coding RNA
Homo sapiens
82
01/09/2016
-
ENA
313
GSK8814: a chemical probe fort he ATAD2 bromodomain
transcription profiling by array
Homo sapiens
12
01/09/2016
-
110
-
ChIP-seq. analysis of pan-histone 3 acetylation in Romidepsin treated TCam-2
ChIP-seq
Homo sapiens
3
01/09/2016
-
-
114
-
Transcriptional profile of WT and Mmp10-/- bone marrow-derived macrophages after infection with Pseudomonas aeruginosa
transcription profiling by array
Mus musculus
18
01/09/2016
112
-
Reduced dosage of β-catenin genetically rescues intracardiac anomalies in a Tbx1 conditional null mouse model of 22q11.2 deletion syndrome
transcription profiling by array
Mus musculus
24
01/09/2016
149
-
A Scalable Epitope Tagging Approach for High Throughput ChIP-seq Analysis
ChIP-seq
Homo sapiens
30
01/09/2016
-
100
-
Effect of Imatinib (1microM, 24 hours) on the microRNA repertoire of chronic myeloid leukemia cell line K562
transcription profiling by array
Homo sapiens
6
01/09/2016
167
-
microRNA profiling of Sprague Dawley organs
RNA-seq of non coding RNA
Rattus norvegicus
458
01/09/2016
-
-
95
-
A highly sensitive and robust method for genome-wide 5hmC profiling of rare cell populations
methylation profiling by high throughput sequencing, RNA-seq of coding RNA
Mus musculus
56
01/09/2016
-
202
-
Mouse embryonic lung FOXF1 ChIP-seq analysis
ChIP-seq
Mus musculus
3
01/09/2016
-
95
-
ROSA26Foxf1; Tie2-cre lung gene expression analysis
transcription profiling by array
Mus musculus
6
01/09/2016
-
107
-
Expression data of thermally eluted RNA from human primary fibroblasts with non-targeting or GLD4 siRNA treatment
transcription profiling by array
Homo sapiens
6
01/09/2016
111
-
CircRNAs in Arabidopsis thaliana across the lifespan
RNA-seq of non coding RNA
Arabidopsis thaliana
1
01/09/2016
-
106
-
Expression data from healthy control human peripheral blood mononuclear cells (PBMC) treated with wild-type IL-2 or F42K
transcription profiling by array
Homo sapiens
27
01/09/2016
274
-
Genomic analyses of breast cancer cells: 17β-hydroxysteroid dehydrogenase type 1 induces transcriptional changes in estradiol-dependent and independent manners
transcription profiling by array
Homo sapiens
8
01/09/2016
178
-
Common pathways involved in adipose tissue inflammation and atherosclerosis
transcription profiling by array
Mus musculus
18
01/09/2016
173
-
Gene expression analysis of hematological malignancies and healthy (non-)hematopoietic cell types
transcription profiling by array
Homo sapiens
166
01/09/2016
-
667
-
Conserved imprinting associated with unique epigenetic signatures in the Arabidopsis genus
methylation profiling by high throughput sequencing, RNA-seq of coding RNA
Arabidopsis lyrata
38
01/09/2016
-
145
-
Splicing in gliomas
transcription profiling by array
Homo sapiens
6
01/09/2016
182
-
Expression data from pulmonary arterial endothelial cells treated with siRNA control or siGLS in stiff or soft matrix
transcription profiling by array
Homo sapiens
12
01/09/2016
118
-
Description of the microRNA repertoire of leucocytes of patients suffering from atypical myeloproliferative syndromes
transcription profiling by array
Homo sapiens
30
01/09/2016
167
-
The role of Hoxa9 and Meis1 in development of acute myeloid leukemia (mRNA)
transcription profiling by array
Mus musculus
12
01/09/2016
162
-
Meiosis timecourse Rap1
transcription profiling by array, ChIP-chip by array
Saccharomyces cerevisiae SK1
180
01/09/2016
122
-
Meiosis timecourse Rap1 ChIP-chip
ChIP-chip by array
Saccharomyces cerevisiae SK1
81
01/09/2016
109
-
Meiosis timecourse Rap1-depletion Rap1 ChIP-chip
ChIP-chip by array
Saccharomyces cerevisiae SK1
6
01/09/2016
95
-
Meiosis timecourse Rap1-depletion expression profile
transcription profiling by array
Saccharomyces cerevisiae SK1
18
01/09/2016
102
-
Meiosis timecourse open chromatin dynamics as measured by FAIRE
ChIP-chip by array
Saccharomyces cerevisiae SK1
12
01/09/2016
118
-
Meiosis timecourse expression profile
transcription profiling by array
Saccharomyces cerevisiae SK1
63
01/09/2016
96
-
JNK1 Ablation in Mice Confers Long-term Metabolic Protection from Diet-Induced Obesity at the Cost of Increased Skin Oxidative Damage
transcription profiling by array
Mus musculus
21
01/09/2016
104
-
A network including TGFβ/Smad4, Gata2 and p57 regulates proliferation of mouse hematopoietic stem/progenitor cells
ChIP-seq, transcription profiling by array
Mus musculus
7
01/09/2016
120
-
A network including TGFβ/Smad4, Gata2 and p57 regulates proliferation of mouse hematopoietic stem/progenitor cells [ChIP-seq]
ChIP-seq
Mus musculus
1
01/09/2016
-
-
95
-
Targeting Non-proteolytic Protein Ubiquitination for the Treatment of Diffuse Large B Cell Lymphoma (Affy SNP6.0 Arrays)
comparative genomic hybridization by array
Homo sapiens
5
01/09/2016
-
175
-
A network including TGFβ/Smad4, Gata2 and p57 regulates proliferation of mouse hematopoietic stem/progenitor cells [expression]
transcription profiling by array
Mus musculus
6
01/09/2016
107
-
Alteration of Gene Expression Profile in Spontaneously Hypertensive Rats Treated with Protein Hydrolysate of Blue Mussel (Mytilus edulis) by DNA Microarray Analysis
transcription profiling by array
Rattus norvegicus
3
01/09/2016
97
-
Systems analysis of B16-WT, B16-shTGFb and B16-shVEGF tumor microenvironment 4 or 14 days after tumor inoculation
transcription profiling by array
Mus musculus
38
01/09/2016
-
124
-
Targeting Non-proteolytic Protein Ubiquitination for the Treatment of Diffuse Large B Cell Lymphoma (Agilent Arrays)
transcription profiling by array
Homo sapiens
20
01/09/2016
213
-
Bone marrow micro-environment mediated drug resistance in Acute promyelocytic leukemia
transcription profiling by array
Homo sapiens
7
01/09/2016
177
-
The Gene Expression Profile of Lung Tissue Following Sulfur Mustard Inhalation Exposure in Large Anesthetized Swine
transcription profiling by array
Sus scrofa
28
01/09/2016
123
-
Alterations to the Synaptic Transcriptome in Response to Ethanol-Induced Behavioral Sensitization in DBA/2J Mice
RNA-seq of coding RNA
Mus musculus
24
01/09/2016
-
-
91
-
Urinary Extracellular Vesicles RNA Profile in Clear Cell Renal Cell Carcinoma as Biomarker
transcription profiling by array
Homo sapiens
23
01/09/2016
-
201
-
Gene expression signature of MYB-GATA overexpression plus GATA1 down regulation in undifferentiated or differentiated UT7 cells
transcription profiling by array
Homo sapiens
8
01/09/2016
140
-
PKCδ regulates the transformed growth of K-ras dependent lung cancer cells through regulation of integrin αVβ3 expression
transcription profiling by array
Homo sapiens
24
01/09/2016
186
-
Expression profiling of dexamethasone inducible expression of YFP-CPR5-C in Arabidopsis
transcription profiling by array
Arabidopsis thaliana
12
01/09/2016
117
-
Expression profiling of Col-0 and rps2 treated with Psm:AvrRpt2
transcription profiling by array
Arabidopsis thaliana
15
01/09/2016
125
-
Human Corneal Epithelial Cells (SV40-HCEC) 6h Treatment with 100nM Vitamin D (1,25D3) vs. Vehicle Control
transcription profiling by array
Homo sapiens
2
01/09/2016
111
-
Human Corneal Epithelial Cells (hTCEpi) 6h Treatment with 100nM Vitamin D (1,25D3) vs. Vehicle Control
transcription profiling by array
Homo sapiens
2
01/09/2016
103
-
Chromatin immunoprecipitation and RNA-seq analysis in purified quiescent yeast cells to identify the genomic RNA polymerase II and histone H3 methylation occupancy profiles and the quiescent cell transcriptome
RNA-seq of coding RNA
Saccharomyces cerevisiae
6
01/09/2016
-
-
88
-
Gene expression variation in mediastinal (pulmonary-draining) lymph nodes of heaves-affected horses versus controls
transcription profiling by array
Equus caballus
14
01/09/2016
95
-
Gene expression analysis of TIL rich HPV driven head and neck tumours reveals a distinct B-cell signature when compared to HPV independent tumours
RNA-seq of coding RNA
Homo sapiens
23
01/09/2016
-
272
-
Zonal Gene Expression and Gene Regulatory Network Responses in Centrilobular and Periportal Hepatocytes Following Repeated Exposure to TCDD (2,3,7,8-tetrachlorodibenzo-p-dioxin)
transcription profiling by array
Rattus norvegicus
191
01/09/2016
119
-
Transcriptome Analysis of floral organ in Canna indica by RNA-Seq
RNA-seq of coding RNA
Canna indica
4
01/09/2016
-
95
-
Transcriptome Sequencing and Assembly of Canna indica Flower
RNA-seq of coding RNA
Canna indica
2
01/09/2016
-
88
-
Effect of Itolizumab on gene expression profiles of patients enrolled in phase 2 psoriasis clinical trial study (Study number: T1hAb‐CT1‐001‐07)
transcription profiling by array
Homo sapiens
48
01/09/2016
120
-
Mouse bone marrow stromal cells: before or after total body irradiation
transcription profiling by array
Mus musculus
2
01/09/2016
97
-
Next generation sequencing analysis of DN1 transcriptomes from Wild type, gl/gl and transgenic CD2-Ostm1 gl/gl mice
RNA-seq of coding RNA
Mus musculus
3
01/09/2016
-
-
88
-
Transcription profiling by high throughput sequencing of Arabidopsis cuc2-3 and cuc2gm-4 mutant plants
RNA-seq of coding RNA
Arabidopsis thaliana
9
01/09/2016
ENA
105
-
Genome-wide transcription profiling of oxic and anoxic cultures
RNA-seq of coding RNA
Escherichia coli str. K-12 substr. MG1655
8
01/09/2016
-
-
83
-
Whole genome RNA micro array analysis of Plasmodium berghei sporozoites infected host cells
transcription profiling by array
Homo sapiens
8
01/09/2016
98
-
Study of microRNA associated with metformin’s anti-tumor effect in cholangiocarcinoma
transcription profiling by array
Homo sapiens
8
01/09/2016
186
-
Study of microRNA associated with galectin-9 and anti-tumor effect in cholangiocarcinoma
transcription profiling by array
Homo sapiens
9
01/09/2016
134
-
Construction and characterization of synthetic microRNA cluster for multiplex RNA interference in mammalian cells
RNA-seq of non coding RNA
Homo sapiens
30
01/09/2016
-
111
-
Gene expression profiling of infrequently and frequently dividing cells in the mouse epidermis
transcription profiling by array
Mus musculus
12
01/09/2016
115
-
The cancer cell of origin controls EMT-related tumour heterogeneity
other
Mus musculus
16
01/09/2016
-
153
-
Binary cell fate decision as high-dimensional critical state transition
transcription profiling by array
Mus musculus
10
01/09/2016
98
-
Ribosome profiling analysis of Dengue Virus
other, RNA-seq of coding RNA
Homo sapiens
116
01/09/2016
-
-
104
-
Histone gene regulation in normal and tumor cells
ChIP-seq, transcription profiling by array
Homo sapiens
52
01/09/2016
252
-
Differential response of normal and tumor cells to nucleosome depletion
transcription profiling by array
Homo sapiens
40
01/09/2016
216
-
Histone genes transcription regulators binding in human cancer (U2OS) and normal (hTERT-RPE1) cells
ChIP-seq
Homo sapiens
12
01/09/2016
-
157
-
Deciphering a functional gene network underlying robustness to protein overproduction
transcription profiling by array
Saccharomyces cerevisiae
6
01/09/2016
113
-
Transcriptome of Ameloblastoma using Laser capture microdissection
transcription profiling by array
Homo sapiens
17
01/09/2016
215
-
RNA-seq analysis of the transcriptional response to blue and red light in the extremophilic red alga, Cyanidioschyzon merolae
RNA-seq of coding RNA
Cyanidioschyzon merolae strain 10D
4
01/09/2016
-
-
88
-
DNA methylation profiling of rhabdomyosarcoma tumor samples
methylation profiling by array
Homo sapiens
15
01/09/2016
194
-
Ketamine suppresses hypoxia-induced inflammatory responses in the late-gestation ovine fetal kidney cortex
transcription profiling by array
Ovis aries
15
01/09/2016
106
-
Expression profiling changes during different albescent stages of 'Anji Baicha' (Camellia sinensis)
RNA-seq of coding RNA
Camellia sinensis
9
01/09/2016
-
-
89
-
The effect of FOXO3 knockdown and PDHA1 knockdown on PDAC cell line Panc-1
transcription profiling by array
Homo sapiens
3
01/09/2016
151
-
cGMP inducer effect on cell line Panc-1
transcription profiling by array
Homo sapiens
2
01/09/2016
152
-
Comparative genomic and transcriptomic analyses of the Fuzhuan brick tea-fermentation fungus Aspergillus cristatus
RNA-seq of coding RNA
Aspergillus cristatus
3
01/09/2016
-
89
-
Mitochondrial supplementation at fertilization enhances early developmental outcome
transcription profiling by array
Sus scrofa
11
01/09/2016
95
-
Gene expression array analysis of tumor-propagating cell populations in human osteosarcoma
transcription profiling by array
Homo sapiens
12
01/09/2016
229
-
Active Demethylation of Both Maternal and Paternal Genomes in Mouse Zygotes
methylation profiling by high throughput sequencing
Mus musculus
1
01/09/2016
-
94
-
Expression data from shoots of rice seedlings after inoculation by Sinorhizobium meliloti 1021
transcription profiling by array
Oryza sativa Japonica Group
24
01/09/2016
124
-
Transcriptional profiling of Escherichia coli after addition of CO gas to aerobically and anaerobically growing cells
transcription profiling by array
Escherichia coli
52
01/09/2016
127
-
Aurora kinase inhibition triggers senescence in human melanoma cells
transcription profiling by array
Homo sapiens
42
01/09/2016
-
211
-
HIP1 mediates prostate carcinogenesis and progression through STAT3 signalling
transcription profiling by array
Homo sapiens
24
01/09/2016
-
183
-
Gene expression profiles of esophageal squamous cell carcinoma cell lines
transcription profiling by array
Homo sapiens
16
01/09/2016
219
-
Host pathogen interaction at a transcriptional level
transcription profiling by array
Homo sapiens
17
01/09/2016
89
-
Comparison of acid treated and untreated
transcription profiling by array
Homo sapiens
3
01/09/2016
105
-
Cell type dependent comparison and strain specific comparison
transcription profiling by array
Homo sapiens
14
01/09/2016
116
-
RNA-seq system comparison of Streptomyces lividans TK24 cultivated under micro-scale biolector and reference bioreactor conditions
RNA-seq of coding RNA
Streptomyces lividans
2
31/08/2016
-
ENA
123
-
Transcriptomic analyses of adipocyte differentiation from human mesenchymal stromal-cells (MSC)
RNA-seq of coding RNA
Homo sapiens
4
31/08/2016
-
ENA
207
-
The AmtR regulon of Mycobacterium smegmatis - Transcription profile of an M. smegmatis amtR mutant (JR258) compared to M. smegmatis mc2155 (wild-type)
transcription profiling by array
Mycobacterium smegmatis
4
31/08/2016
114
-
In vitro assessment of acute exposure of THS2.2 aerosol on organotypic acute human nasal tissue cultures
transcription profiling by array
Homo sapiens
371
31/08/2016
284
-
Transcription profiling by array of induced naïve pluripotency in H9 human embryonic stem cells
transcription profiling by array
Homo sapiens
6
31/08/2016
185
-
Transcription profiling of Th17 cells from mice expressing Mekk1 without catalytic domain (Map3k1∆KD) and control mice
transcription profiling by array
Mus musculus
2
31/08/2016
-
142
-
Transcription profiling by array of a human breast cancer cell line treated with small molecule inhibitors of the Hypoxia inducible factor (HIF) hydroxylases
transcription profiling by array
Homo sapiens
13
31/08/2016
-
206
-
RNA-seq of coding RNA of wheat heads from 3, 6, 12, 24, 36, and 48 hours after inoculation of fungal pathogen Fusarium graminearum or mock inoculation
RNA-seq of coding RNA
Triticum aestivum
72
31/08/2016
-
ENA
546
Molecular characterization of acute lymphoblastic leukemia with CRLF2 overexpression in childhood
RNA-seq of coding RNA
Homo sapiens
4
30/08/2016
-
ENA
156
-
Dual readout of two histone modifications at the same time with synthetic recombinant proteins reveals H3K36me3-H3K9me3 bivalency at weakly transcribed genes
ChIP-seq
Homo sapiens
15
30/08/2016
-
ENA
101
-
L1-associated genomic regions are deleted in somatic cells of the healthy human brain – RNA-Sequencing
RNA-seq of coding RNA
Homo sapiens
9
28/08/2016
-
ENA
141
-
L1-associated genomic regions are deleted in somatic cells of the healthy human brain – Whole Genome Sequencing
DNA-seq
Homo sapiens
3
28/08/2016
-
ENA
148
-
L1-associated genomic regions are deleted in somatic cells of the healthy human brain – DNA Sequencing
DNA-seq
Homo sapiens
101
28/08/2016
-
ENA
242
-
Transcription profiling by array of heat shock response in a panel of lymphoblastoid cell lines established from 60 founder individuals in the Yoruba (YRI) HapMap population
transcription profiling by array
Homo sapiens
120
26/08/2016
-
263
-
MicroRNA profiling in Pten knockout mouse thymus cells
transcription profiling by array
Mus musculus
6
25/08/2016
-
182
-
Transcription profiling by array of liver tissues from mice with liver-specific knockout of Pit1 and wild-type littermates fed with either a high-fat diet or chow control diet
transcription profiling by array
Mus musculus
20
25/08/2016
-
186
In vitro expression in FGFR inhibitor sensitive and resistant cell lines
transcription profiling by array
Homo sapiens
64
25/08/2016
197
-
Molecular basis of beige adipocyte maintenance
RNA-seq of coding RNA
Mus musculus
19
25/08/2016
-
ENA
491
-
RNA-sequencing of a mouse-model of Spinal Muscular Atrophy reveals tissue-wide changes in splicing of U12-dependent introns
RNA-seq of coding RNA
Homo sapiens, Mus musculus
85
25/08/2016
-
ENA
472
-