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Showing 401 - 500 of 70589 experiments
AccessionTitleTypeOrganismAssaysReleasedProcessedRawViewsAtlas
microRNA profiling by array of human Autosomal Dominant Polycystic Kidney Disease kidney epithelial cell lines
microRNA profiling by array
Homo sapiens
6
05/07/2017
-
113
-
Gene expression profiling in human ADPKD cell lines
transcription profiling by array
Homo sapiens
6
05/07/2017
-
100
-
Transcriptome analysis of Arabidopsis expressing the transcription factor INDEHISCENT under the control of the 35S promoter after treatment with auxin
transcription profiling by array
Arabidopsis thaliana
12
05/07/2017
111
-
Transcriptome profiling after CBX7 knockdown in LNCaP cells
transcription profiling by array
Homo sapiens
12
05/07/2017
-
143
-
Long non-coding RNA expression profiling of human T cells in hepatocellular carcinoma
transcription profiling by array
Homo sapiens
9
05/07/2017
-
152
-
Transcriptome analysis in the Antarctic bacterium Pseudomonas extremaustralis at low temperatures
RNA-seq of coding RNA
Pseudomonas extremaustralis 14-3 substr. 14-3b
4
05/07/2017
-
ENA
69
-
Differences of gut mucosa gene expression between septic very low birth weight infants and their non-septic twins
transcription profiling by array
Homo sapiens
10
05/07/2017
-
127
-
Transcription profiling by array of E. faecalis V583 LexA- and wild type to investigate constitutive SOS response
transcription profiling by array
Enterococcus faecalis
2
05/07/2017
65
-
Transcription profiling of human breast cancer and scarcoma tissue and adjacent tissue to investigate alterantive splicing
transcription profiling by array
Homo sapiens
40
05/07/2017
277
-
Transcriptional differences between the peripheral and the transcription zone of the prostate
RNA-seq of coding RNA
Homo sapiens
18
04/07/2017
-
ENA
229
-
RNA-seq analysis of 2 cell line models of lung disease (A549 and BEAS-2B) and primary bronchial epithelial cells in Project 3 of Open Targets 020 - Epigenomes of Cell Lines
RNA-seq of coding RNA
Homo sapiens
7
04/07/2017
-
ENA
513
Transcription profiling by array of human extrahepatic cholangiocyte organoids, freshly isolated common bile duct cholangiocytes and embryonic stem cells
transcription profiling by array
Homo sapiens
15
04/07/2017
153
-
Analysis of transcriptomes from 21 tissues, 13 melanoma samples and 7 breast cancer cell lines, enriched for transcripts from haploblocks with intronic and intergenic GWAS SNPs
RNA-seq of coding RNA
Homo sapiens
41
04/07/2017
-
ENA
565
-
Transcription profiling by array of the differences between matched male and female breast cancer
transcription profiling by array
Homo sapiens
25
04/07/2017
-
214
-
Sphingobium Nickel resistance analysis by RNA-seq approach
RNA-seq of coding RNA
Sphingobium sp. ba1
6
03/07/2017
ENA
66
-
Gene expression between dry and imbibed seeds in vitamin C defective (vtc) mutants and wild-type Arabidopsis thaliana
RNA-seq of coding RNA
Arabidopsis thaliana
18
03/07/2017
ENA
76
-
Time of day determines Arabidopsis transcriptome and growth dynamics under mild drought
RNA-seq of coding RNA
Arabidopsis thaliana
21
03/07/2017
ENA
97
-
Transcription profiling by array of South Australian bread wheat under salt stress
transcription profiling by array
Triticum aestivum
84
02/07/2017
-
178
-
Transcription profiling by array of human hematopoietic stem cell isolated from multiple sclerosis patients and healthy controls
transcription profiling by array
Homo sapiens
8
02/07/2017
-
123
-
RNA-seq of Japonica rice with overexpression or knockdown of OsMPH1 gene, which is involved in regulation of plant height --- a major trait affecting yield potential
RNA-seq of coding RNA
Oryza sativa Japonica Group
9
01/07/2017
-
ENA
71
-
RNA-seq of Brachypodium distachyon culms from control and BdBAHD01 RNAi plants
RNA-seq of coding RNA
Brachypodium distachyon
12
01/07/2017
-
ENA
71
-
RNA-seq of Setaria viridis culms from control and SvBAHD01 RNAi plants
RNA-seq of coding RNA
Setaria viridis
9
01/07/2017
-
ENA
69
-
Gene expression analysis of lung cancer samples and healthy controls
transcription profiling by array
Homo sapiens
40
01/07/2017
-
444
-
Transcriptome profiling of human anaplastic meningioma IOMM-Lee cells following silencing of HuR (Human antigen R) gene expression by siRNA
transcription profiling by array
Homo sapiens
12
01/07/2017
-
60
-
Small RNA and total RNA sequencing of C. elegans with mutations in the hrde-1 and emb-4 genes
RNA-seq of non coding RNA
Caenorhabditis elegans
40
01/07/2017
-
ENA
110
-
Transcription profiling by high throughput sequencing of murine small intestinal epithelial cells stimulated with interleukin-28A
RNA-seq of coding RNA
Mus musculus
8
01/07/2017
-
ENA
143
-
Transcription profiling by array of human osteosarcoma cell line U2OS treated with ZM447439 (an aurora kinase inhibitor) or SB202190 (a p38 inhibitor)
transcription profiling by array
Homo_sapiens
4
01/07/2017
129
-
Time-course of bone marrow macrophages infected with Listeria monocytogenes in the presence or absence of IFNgamma
transcription profiling by array
Mus musculus
40
30/06/2017
-
126
-
Comparative microarrays of Actinoplanes sp. SE50/110 ΔacrA with the Actinoplanes sp. SE50/110 wildtype
transcription profiling by array
Actinoplanes sp. SE50/110
4
30/06/2017
-
63
-
RNAseq analysis of CD4 and CD8 T cells in response to vaccinia virus infection
RNA-seq of coding RNA
Mus musculus
12
30/06/2017
ENA
105
-
Transcriptional profiling of human breast tumor samples before and after treatment with chemotherapy with and without bevacizumab
transcription profiling by array
Homo sapiens
358
30/06/2017
444
-
Transcription profiling of human multiple myeloma cells after knockdown of EphA3
transcription profiling by array
Homo sapiens
4
30/06/2017
427
-
Transcription profiling by array of MCF7 cell lines silenced with TRAP1 small interfering RNA compared with scrambled RNA control
transcription profiling by array
Homo sapiens
6
30/06/2017
140
-
Expression profile of microRNAs in human follicular lymphoma (FL), reactive lymph nodes (rLN) and pure T cells
microRNA profiling by array
Homo sapiens
42
29/06/2017
-
201
-
ChIP-Seq of Gabpa in male C57Bl/6 mice liver
ChIP-seq
Mus musculus
5
29/06/2017
-
ENA
84
-
Histone H3K9me3 ChIP-seq of young adult C. elegans wildtype, and mutants emb-4 (qm31) and hrde-1 (tm1200)
ChIP-seq
Caenorhabditis elegans
20
29/06/2017
-
ENA
70
-
RNA-seq of wild-type Salmonella Typhimurium SL1344 and its AcrB D408A mutant
RNA-seq of coding RNA
Salmonella enterica subsp. enterica serovar Typhimurium str. SL1344
6
29/06/2017
ENA
72
-
Analysis of post-transcriptional RNA modifications in Caenorhabditis elegans under stress
RNA-seq of non coding RNA
Caenorhabditis elegans
9
29/06/2017
-
ENA
69
-
Acquired TET2 mutation-linked clonal hematopoiesis in FPD/AML patient led to the development of pre-leukemic clone resulting independently in T2-ALL and AML-M0
comparative genomic hybridization by array
Homo sapiens
2
29/06/2017
-
115
-
Transcriptome profiling of glioblastoma tissues and peritumoral regions by Serial Analysis of Gene Expression
transcription profiling by SAGE
Homo sapiens
27
29/06/2017
-
ENA
198
-
Finding new Chimeric RNAs in RNA-seq data, a test study in Acute Myeloid Leukemia patient cells
RNA-seq of coding RNA
Homo sapiens
3
28/06/2017
-
ENA
217
-
Transcription profiling by array of left ventricular papillary muscles from rats with diabetic cardiomyopathy and healthy controls treated with atorvastatin or vehicle control for 15 days
transcription profiling by array
Rattus norvegicus
12
27/06/2017
-
73
-
Transcription changes at sub-optimal root temperature in different grafting combinations of tomato rootstocks and scions
transcription profiling by array
Solanum habrochaites, Solanum lycopersicum
24
27/06/2017
-
72
-
Methylome profiling of human glioblastoma using Illumina 450K microarrays for the GlioTeX panel
methylation profiling by array
Homo sapiens
10
24/06/2017
-
171
-
Transcription profiling by array of mouse primary myoblasts constitutively expressing Hippo pathway downstream effectors Yap or Taz against empty vector controls
transcription profiling by array
Mus musculus
18
20/06/2017
126
-
Transcription profiling by array of Bacillus amyloliquefaciens FZB42 wildtype and sigD- mutants grown in media supplemented with soil extract
transcription profiling by array
Bacillus amyloliquefaciens
6
20/06/2017
84
-
Microarray analysis of abiotic stress responses in Arabidopsis thaliana rosette leaf tissue of Col-0 wild type plants and double/triple knockout mutants of aquaporins (pip2;1 pip2;2 and pip2;1 pip2;2 pip2;4)
transcription profiling by array
Arabidopsis thaliana
135
20/06/2017
242
-
Transcriptional profiling by array of chronic myeloid leukaemia (CML) stem/progenitor cells (CD34+38-) treated with tyrosine kinase inhibitors (imatinib, dasatinib and nilotinib) at different time points (8 hours and 7 days) against untreated controls
transcription profiling by array
Homo sapiens
49
20/06/2017
-
260
-
Transcriptional profiling of the developmental gene whiH deletion mutant of Streptomyces venezuelae ATCC 10712 at 7 time points from 8 to 20 hours of growth
transcription profiling by array
Streptomyces venezuelae
42
19/06/2017
125
-
RNA-seq of Hutchinson-Gilford progeria syndrome cells treated with proteasome inhibitor MG132
RNA-seq of coding RNA
Homo sapiens
2
18/06/2017
-
ENA
162
-
AtPRMT5 regulates shoot regeneration through modulating multiple genes expression analyzed by RNA-seq
RNA-seq of coding RNA
Arabidopsis thaliana
6
18/06/2017
ENA
94
-
Genes induced by HERV-K virus retroviral envelop
transcription profiling by array
Homo sapiens
8
17/06/2017
-
99
-
Expression array of RKO colorectal cancer cells resistant to irinotecan (CPT-11)
transcription profiling by array
Homo sapiens
3
17/06/2017
-
161
-
Microarray transcription analysis of MDS/MPN leukocyte samples with and without EZH2 mutations (n = 12, each) and EZH2-downregulated F-36P, MOLM-13 and OCI-M2 cell lines, using 2 shRNAs targeting EZH2 and a non-targeting control shRNA, each
transcription profiling by array
Homo sapiens
60
15/06/2017
-
258
-
Dynamic regulation of VEGF-inducible genes by an ERK-ERG-p300 transcriptional network
transcription profiling by array
Homo sapiens
14
15/06/2017
-
92
-
ChIP-seq of ERG-bound regulatory elements in human and bovine vascular endothelial cells
ChIP-seq
Bos taurus, Homo sapiens
10
15/06/2017
-
ENA
143
-
Elevated growth temperature in procyclic form of Trypanosoma brucei
RNA-seq of coding RNA
Trypanosoma brucei
6
15/06/2017
-
ENA
55
-
RNA-seq of in vitro-generated murine T helper 17 cells
RNA-seq of coding RNA
Mus musculus
8
14/06/2017
ENA
98
-
Transcription profiling by array of 4T1 murine breast carcinoma cells and derived cell lines resistant to photodynamic therapy induced by novel porphyrin-based photosensitizers and temoporfin
transcription profiling by array
Mus musculus
13
14/06/2017
-
147
-
RNA-seq of ppp1r13l knockdown in neonatal mice cardiomyocytes and lipopolysaccharide stimulation kinetics transcriptome
RNA-seq of coding RNA
Mus musculus
12
13/06/2017
ENA
118
-
RNA-seq of BALB/cJ‐Ppp1r13lwa3/J (wa3) mouse hearts vs BALB/C wildtype mice aged 7 weeks and 12 weeks mice, as well as lipopolysaccharide treatment for 12-week-old mice
RNA-seq of coding RNA
Mus musculus
12
13/06/2017
-
ENA
92
-
Mutations in ACTRT1 and its transcribed non-coding elements lead to aberrant activation of the Hedgehog signaling pathway in inherited and sporadic basal cell carcinomas
transcription profiling by array
Homo sapiens
5
12/06/2017
-
190
-
p63 spatio-temporal control of cleft palate
transcription profiling by array
Mus musculus
8
12/06/2017
94
-
Transcription profiling by RNA-Seq mouse embryos
RNA-seq of coding RNA
Mus musculus
5
12/06/2017
ENA
145
-
Microarray analysis of palatal shelves from wild-type versus p63-null mouse embryos
transcription profiling by array
Mus musculus
6
12/06/2017
106
-
Transcription profiling by array of neonatal and children dermal fibroblasts isolated from cleft lip and adult dermal fibroblasts of breast and face
transcription profiling by array
Homo sapiens
93
11/06/2017
288
-
Transcription profiling by array of reproductive tissues from female Cynomolgus macaques ( Macaca fascicularis ) after systemic vaccination with a modified vaccinia virus Ankara (MVA)-HIVB
transcription profiling by array
Macaca fascicularis
18
09/06/2017
-
81
-
Transcriptome Analysis of Preinvasive and Invasive Early Squamous Carcinoma in Archival Laser Microdissected Samples
transcription profiling by array
Homo sapiens
60
09/06/2017
256
-
ChIP-seq data of Jun target genes and the control in zebrafish embryos
ChIP-seq
Danio rerio
8
08/06/2017
-
ENA
96
-
Global expression profiling time series of early human embryonic stem cell differentiation towards the mesoderm lineage
transcription profiling by array
Homo sapiens
33
08/06/2017
-
188
-
Transcriptome analysis of self-renewing human pancreatic progenitors derived from pluripotent stem cells
RNA-seq of coding RNA
Homo sapiens
9
06/06/2017
-
ENA
165
-
RNA-seq of Medicago truncatula A17 and the ethylene insensitive sickle mutant interacting with the fungal root pathogen, Rhizoctonia solani AG8
RNA-seq of coding RNA
Medicago truncatula
24
06/06/2017
ENA
106
-
EPO-regulated targets in E1, E2, and E3 erythroid progenitors
transcription profiling by array
Mus musculus
20
06/06/2017
110
-
miRNA expression profiles in fresh frozen and formalin-fixed paraffin embedded tonsillar tumors
transcription profiling by RT-PCR
Homo sapiens
30
06/06/2017
-
187
-
RNA-seq of high lipid producing Yarrowia lipolytica during nitrogen or carbon restriction (control strain)
RNA-seq of coding RNA
Yarrowia lipolytica
6
06/06/2017
-
ENA
93
-
Identifying crossover locations in Arabidopsis thaliana CMT3-11 (Col) x CMT3-7 (Ler) F2 and wild type Col x Ler F2 populations using genotyping by sequencing
genotyping by high throughput sequencing
Arabidopsis thaliana
555
05/06/2017
-
ENA
219
-
Nucleosome-depleted DNA transposons act as enhancers of meiotic recombination at Arabidopsis genes (RNA-seq)
RNA-seq of coding RNA
Arabidopsis thaliana
2
05/06/2017
-
ENA
79
-
Meiotic recombination initiation hotspots in Arabidopsis genes and transposons (H3K4m3 ChIP-seq)
ChIP-seq
Arabidopsis thaliana
9
05/06/2017
-
ENA
83
-
Meiotic recombination initiation hotspots in Arabidopsis genes and transposons (MNase-seq)
MNase-seq
Arabidopsis thaliana
3
05/06/2017
-
ENA
93
-
Meiotic recombination initiation hotspots in Arabidopsis genes and transposons (SPO11-1-oligonucleotides-seq)
DNA-seq
Arabidopsis thaliana
10
05/06/2017
-
ENA
106
-
Transcription profiling of dermal fibroblasts subjected to different fluid flow rates
transcription profiling by array
Homo sapiens
9
05/06/2017
-
107
-
Tissue and developmental atlas of Brachypodium distachyon
transcription profiling by array
Brachypodium distachyon
117
03/06/2017
-
129
-
Genome-wide gene expression analysis of MDA-MB-468 human breast cancer cells treated with PLA2G7 shRNA
transcription profiling by array
Homo sapiens
6
02/06/2017
-
179
-
Genome-wide gene expression analysis of MDA-MB-468 human breast cancer cells treated with PLA2G7 siRNA
transcription profiling by array
Homo sapiens
4
02/06/2017
-
138
-
Analysis of cardiovirus and infected host-cell gene expression through RNA sequencing and ribosome profiling
translation profiling, RNA-seq of coding RNA
Mus musculus
20
02/06/2017
-
ENA
131
-
Analysis of undifferentiated hiPSC and differentiation into intermediate mesoderm of cells from patients carrying a heterozygous mutation in the SAMD9 gene
transcription profiling by array
Homo sapiens
10
02/06/2017
-
96
-
Genome-wide analysis of somatic copy number alterations and chromosomal breakages in osteosarcoma
genotyping by array
Homo sapiens
160
02/06/2017
-
337
-
Transcription profiling by high throughput sequencing of pancreatic beta cells from wild type and Abcc8 knockout mice
RNA-seq of coding RNA
Mus musculus
8
02/06/2017
-
ENA
113
-
ATAC-seq on endocardial cells from E12.5 mouse hearts in Tbx20 knockouts and wild type counterparts
ATAC-seq
Mus musculus
4
02/06/2017
ENA
301
-
Deciphering the relationship between polycomb repression and stochastic gene expression from single-cell RNA-seq data
RNA-seq of coding RNA from single cells
Mus musculus
288
01/06/2017
-
ENA
209
-
Microarray analysis of leaves of Arabidopsis thaliana Col-0 plants exposed to volatile pinenes (treatment) or hexane (control)
transcription profiling by array
Arabidopsis thaliana
8
01/06/2017
97
-
Effect of elevated c-di-GMP in Sinorhizobium meliloti
transcription profiling by array
Sinorhizobium meliloti
4
01/06/2017
63
-
Fip1 iCLIP-seq in Hela cells without treatment or treated with negative control anti-sense oligos (ASO) or snoRD50a ASO to study how snoRD50a affects Fip1/RNA interaction in mRNA 3' processing
CLIP-seq
Homo sapiens
6
01/06/2017
-
ENA
68
-
RNA-biotin based pull down assay with polyA site (PAS) RNA substrates in Hela Nuclear Extract followed by RNA-seq to discover trans-acting RNA molecules involved in mRNA 3 processing
RIP-seq
Homo sapiens
4
01/06/2017
-
ENA
67
-
The epigenetic modifier Fam208a is required to maintain epiblast cell potency
transcription profiling by array
Mus musculus
12
01/06/2017
-
150
-
PBMCs from stage IV melanoma patients after vaccination with melanoma-targeted mature dendritic cells (mDCs)
transcription profiling by array
Homo sapiens
142
01/06/2017
255
-
Comparing effects of inhibition of activin receptor type IIB (ActRIIB), myostatin (GDF8) and/or activinA in mouse muscle
RNA-seq of coding RNA
Mus musculus
34
01/06/2017
ENA
124
-
Lipidomic and Metabolic Changes in the P4-type ATPase ATP10D deficient C57BL/6J Wild Type Mice upon Rescue of ATP10D Function
transcription profiling by array
Mus musculus
8
01/06/2017
-
67
-
Transcriptomic responses of three-spined stickleback (Gasterosteus aculeatus) from Aire and Siblyback populations to ethinyl-estradiol, copper and binary mixtures
transcription profiling by array
Gasterosteus aculeatus
120
01/06/2017
-
100
-
Transcriptomic profiles of the acetogen Clostridium ljungdahlii during lithoautotrophic growth with syngas or with H2 and CO2 compared to organoheterotrophic growth with fructose
transcription profiling by array
Clostridium ljungdahlii
12
01/06/2017
80
-