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AccessionTitleTypeOrganismAssaysReleasedProcessedRawViewsAtlas
Copy-number variation (CNV) study of glioblastoma parental tumors and paired patient derived cell lines (PDCLs) to study the extent PDCLs recapitulates the genome landscape of parental tumor
comparative genomic hybridization by array
Homo sapiens
20
01/11/2016
-
377
-
Transcription profiling by array of nine pairs of Glioblastoma tumors and paired patient derived cell lines (PDCLs) to study the extent to which PDCLs recapitulates the genome landscape of parental tumors
transcription profiling by array
Homo sapiens
18
01/11/2016
-
386
-
Single-cell RNA sequencing of spleen-derived LCK-expressing cells from adult zebrafish
RNA-seq of coding RNA from single cells
Danio rerio
864
01/11/2016
ENA
536
-
Transcription profiling by array of Schizosaccharomyces pombe 972 h- treated with antimycin
transcription profiling by array
Schizosaccharomyces pombe
3
01/11/2016
-
242
-
transcription profiling by array of fission yeast during adaptation to respiratory medium
transcription profiling by array
Schizosaccharomyces pombe
14
01/11/2016
-
315
-
Transcription profiling of patient-derived acute myeloid leukemia cells to study the association of UNCX expression with proliferation and differentiation of myeloid cells
transcription profiling by array
Homo sapiens
6
01/11/2016
-
309
-
Transcriptional profiling by array of Arabidopsis thaliana closed floral buds from young primary inflorescences of wild type (Ws-3) and DRINK ME (AT2G21230) overexpression line
transcription profiling by array
Arabidopsis thaliana
2
01/11/2016
-
249
-
MicroRNA expression profiling of normal and glioblastoma-derived neural stem cells
microRNA profiling by array
Homo sapiens
38
01/11/2016
-
407
-
Treatment of non-CML CD34+ cells with EZH2 inhibitor GSK343
transcription profiling by array
Homo sapiens
6
01/11/2016
-
305
-
miRNASeq of musculoskeletal ageing using human mesenchymal stem cells and their tissue constructs
RNA-seq of non coding RNA
Homo sapiens
30
01/11/2016
-
ENA
344
-
Treatment of CML CD34+ cells with EZH2 inhibitor GSK343
transcription profiling by array
Homo sapiens
6
01/11/2016
-
312
-
Transcription profiling by array of involution day 2 mammary glands in Rac1 knockout and wild type mice
transcription profiling by array
Mus musculus
6
31/10/2016
-
268
The nuclear receptor ERbeta engages AGO2 in regulation of gene transcription, RNA splicing and RISC loading. Part 1
RIP-seq
Homo sapiens
12
31/10/2016
-
ENA
106
-
A PP2A-Pab1-mediated crosstalk between TORC1 & TORC2 regulates the differentiation response in fission yeast
RNA-seq of coding RNA
Schizosaccharomyces pombe
18
31/10/2016
-
ENA
238
A systems toxicology analysis in ApoE knockout mice
transcription profiling by array
Mus musculus
167
31/10/2016
335
-
Transcriptional profiling by polyA+ or total RNA sequencing of UNR (CSDE1) knockdown in SK-MEL-103 melanocytes
RNA-seq of coding RNA
Homo sapiens
8
31/10/2016
-
320
-
Deep Mutational Scanning of HIV tat and rev in a non-overlapped context
DNA-seq
HIV-1 vector pNL4-3
606
30/10/2016
ENA
289
-
Leveraging cell type-specific regulatory regions to detect SNPs associated with tissue factor pathway inhibitor plasma levels
ChIP-seq
Homo sapiens
4
30/10/2016
-
ENA
183
-
RNA-seq for miRNAs in fibrocyte-adipocyte progenitors (FAPs) or myogenic progenitors (MPs) during muscle regeneration
microRNA profiling by high throughput sequencing
Mus musculus
4
29/10/2016
ENA
183
-
3prime RNA-seq of human prostate cancer cell line DU-145 treated with Senexin A
RNA-seq of coding RNA
Homo sapiens
6
28/10/2016
-
ENA
296
-
Blood transcriptomic diagnosis of active tuberculosis and discrimination from other febrile illnesses
transcription profiling by array
Homo sapiens
114
28/10/2016
499
-
RNA-Sequencing of Candida albicans that were engineered to mistranslate the CUG codon at constitutively elevated levels, in the presence and absence of the antifungal drug fluconazole, SYBARIS project
DNA-seq
Candida albicans
6
27/10/2016
-
ENA
209
-
Microarray profiling of polyploid macrophage progeny
transcription profiling by array
Mus musculus
20
27/10/2016
-
228
Detection of potential neuroprotective changes at the molecular, anatomical and physiological level in identified human pyramidal cells in response to brain edema and increased intracranial pressure
transcription profiling by array
Homo sapiens
27
27/10/2016
-
252
ERN1 and ALPK1 inhibit differentiation of bi-potential tumor-initiating cells in human breast cancer
transcription profiling by array
Homo sapiens
12
27/10/2016
-
135
-
Impact of miRNA Levels, Target-Site Complementarity and Cooperativity on ceRNA-Regulated Gene Expression
RNA-seq of coding RNA, RNA-seq of non coding RNA
Mus musculus
67
27/10/2016
-
242
-
DNA demethylation by Tet dioxygenases controls gastrula patterning by regulating Lefty-Nodal signaling
methylation profiling by high throughput sequencing, RNA-seq of coding RNA
Mus musculus
20
27/10/2016
-
170
-
Study on miRNA expression pattern in Aging Mouse Hippocampal Neurons
RNA-seq of non coding RNA
Mus musculus
3
27/10/2016
-
172
-
RNA-seq analysis of S. pneumoniae Pn-STP (PhpP) mutants
RNA-seq of coding RNA
Streptococcus pneumoniae
4
27/10/2016
-
135
-
DNA methylation variation of human-specific Alu repeats
methylation profiling by high throughput sequencing
Homo sapiens
3
27/10/2016
-
244
-
Comprehensive transcriptome analysis of phytohormone pathway genes and miRNAs in ABA initiated strawberry receptacle ripening
other, RNA-seq of coding RNA, RNA-seq of non coding RNA
Fragaria x ananassa
21
27/10/2016
-
-
95
-
Tracing Enhancer Networks using Epigenetic Traits (TENET)
ChIP-seq, RNA-seq of coding RNA
Homo sapiens
29
26/10/2016
ENA
418
-
The role of unliganded thyroid hormone receptors (TRs) in human adipose derived stem cells (hADSC)
transcription profiling by array
Homo sapiens
12
26/10/2016
-
157
-
The role of thyroid hormone receptors (TRs) in human adipose derived stem cells (hADSC), isolated from human adipose tissue collected during liposuction procedures
transcription profiling by array
Homo sapiens
24
26/10/2016
-
156
-
Overexpression of PHF8 promotes an EMT-related gene signature in MCF10A cells
RNA-seq of coding RNA
Homo sapiens
16
26/10/2016
-
ENA
210
-
Response of Arabidopsis roots to combinations of nitrogen and hormonal signals
transcription profiling by array
Arabidopsis thaliana
64
26/10/2016
252
-
Genomic profiling of patient-derived xenografts identify high level “passenger” gene aberrations associated with better prognosis in non-small cell lung cancer
transcription profiling by array
Mus musculus
36
26/10/2016
-
349
-
Global miRNA expression profile of head and neck squamous cell carcinoma patients with resistant and sensitive tumors
microRNA profiling by array
Homo sapiens
15
25/10/2016
-
274
-
EcR recruits and stimulates dMi-2 remodeling activity to constrain transcription of hormone-regulated genes
ChIP-seq
Drosophila melanogaster
4
25/10/2016
-
ENA
206
-
Tuning the transcriptional response to hypoxia through HIF prolyl- and asparaginyl-hydroxylase inhibition:Sequencing Data
RNA-seq of coding RNA
Homo sapiens
12
25/10/2016
-
ENA
213
-
ChIP-seq analysis of human neuroblastoma cell lines
ChIP-seq
Homo sapiens
17
25/10/2016
ENA
318
-
Transcription profiling by array of mouse intestinal epithelial spheroid-derived stem cells, wound-associated epithelial cells and enterocytes
transcription profiling by array
Mus musculus
12
25/10/2016
222
-
Transcriptome analysis of IEC4.1 cells in response to TNFα stimulation
transcription profiling by array
Mus musculus
12
25/10/2016
-
150
-
Transcriptome profiles of Huh7.5.1-NTCP cells treated with HBV preS1 peptide
transcription profiling by array
Homo sapiens
6
25/10/2016
-
230
-
H3K4me1 ChIP-seq in murine pro-B cells
ChIP-seq
Mus musculus
2
25/10/2016
ENA
151
-
Promiscuous targeting of bromodomains by Bromosporine identifies BET proteins as master regulators of primary transcription response in leukemia
transcription profiling by array
Homo sapiens
78
25/10/2016
-
286
-
Promiscuous targeting of bromodomains by Bromosporine identifies BET proteins as master regulators of primary transcription response in leukemia [set2]
transcription profiling by array
Homo sapiens
42
25/10/2016
-
239
-
Promiscuous targeting of bromodomains by Bromosporine identifies BET proteins as master regulators of primary transcription response in leukemia [set 1]
transcription profiling by array
Homo sapiens
36
25/10/2016
-
259
-
Modeling the ESR1 tyrosine 537 mutation with CRISPR-Cas9 for mechanistic studies and evaluation of therapeutic approaches for metastatic breast cancer
ChIP-seq, RNA-seq of coding RNA
Homo sapiens
17
25/10/2016
-
232
-
Modeling the ESR1 tyrosine 537 mutation with CRISPR-Cas9 for mechanistic studies and evaluation of therapeutic approaches for metastatic breast cancer [RNA-Seq]
RNA-seq of coding RNA
Homo sapiens
11
25/10/2016
-
ENA
244
-
Modeling the ESR1 tyrosine 537 mutation with CRISPR-Cas9 for mechanistic studies and evaluation of therapeutic approaches for metastatic breast cancer [ChIP-Seq]
ChIP-seq
Homo sapiens
6
25/10/2016
ENA
228
-
Blood transcription profiling of infections of humans with Leishmania infantum
transcription profiling by array
Homo sapiens
45
25/10/2016
-
186
-
Antigen specific human conventional T cells (CD154+) or regulatory T cells (CD137+) directed agains A. fumigatus or Birch pollen lysate isolated from Birch pollen allergic patients or healthy controls
transcription profiling by array
Homo sapiens
42
25/10/2016
154
-
Transcriptional profiling of newly generated dentate granule cells using TU-tagging reveals pattern shifts in gene expression during circuit integration
RNA-seq of coding RNA
Mus musculus
10
25/10/2016
-
ENA
122
-
Multiparameter functional diversity of human C2H2 zinc finger proteins
ChIP-seq, RNA-seq of coding RNA
Homo sapiens
252
25/10/2016
-
262
-
Multiparameter functional diversity of human C2H2 zinc finger proteins [RNA-Seq]
RNA-seq of coding RNA
Homo sapiens
92
25/10/2016
ENA
220
-
Identification of in vivo binding sites of human GFP-tagged C2H2-ZF proteins
ChIP-seq
Homo sapiens
160
25/10/2016
ENA
222
-
Pan-cancer transcriptomic analysis associates long non-coding RNAs with key mutational driver events
RNA-seq of coding RNA
Homo sapiens
8
25/10/2016
-
242
-
Developing gene signature against Mycobacterium bovis infection in Cattle
transcription profiling by array
Bos indicus, Bos primigenius, Bos taurus, Bubalus bubalis
8
25/10/2016
132
-
Direct regulation of alternative splicing by SMAD3 through interaction with PCBP1 is essential for the tumor-promoting role of TGF-beta
RNA-seq of coding RNA
Homo sapiens
18
25/10/2016
-
-
109
-
RNA sequencing of hiPSC derived neural crest populations from Familial Dysautonomia patients
RNA-seq of coding RNA
Homo sapiens
6
25/10/2016
-
ENA
156
-
Comparison of gene expression between Human umbilical vein endothelial cells and Human liver sinusoidal endothelial cells
transcription profiling by array
Homo sapiens
8
24/10/2016
192
-
RNA-Seq of Kidney Glomeruli from Type 2 diabetic (db/db) and non-diabetic mice
RNA-seq of coding RNA
Mus musculus
6
24/10/2016
ENA
132
-
Genome wide map of long noncoding RNA Tug1 binding sites in cultured mouse podocytes
ChIP-seq
Mus musculus
6
24/10/2016
ENA
117
-
FOXA and master transcription factors recruit Mediator and Cohesin to the core transcriptional regulatory circuitry of cancer cells
ChIP-seq
Homo sapiens
26
24/10/2016
-
270
-
Developmental gene expression of Hymenochirus boettgeri
RNA-seq of coding RNA
Hymenochirus boettgeri
8
24/10/2016
-
-
92
-
RNA-seq of brain mural cells and microvascular fragments
RNA-seq of coding RNA
Mus musculus
6
24/10/2016
-
159
-
Analysis of Fusarium verticillioides gene expression in response to 2-benzoxazolinone (BOA)
transcription profiling by array
Fusarium verticillioides
4
24/10/2016
120
-
Developmental gene expression of Xenopus laevis J strain
RNA-seq of coding RNA
Xenopus laevis
56
24/10/2016
-
-
100
-
Developmental gene expression of Xenopus laevis J strain [stage]
RNA-seq of coding RNA
Xenopus laevis
28
24/10/2016
-
-
96
-
Tissue gene expression of Xenopus laevis J strain [tissue]
RNA-seq of coding RNA
Xenopus laevis
28
24/10/2016
-
-
102
-
Transcription profiling by high throughput sequencing of Arabidopsis plants in response to a combination of salt and heat stress
RNA-seq of coding RNA
Arabidopsis thaliana
12
24/10/2016
-
ENA
256
Identification of a macrophage PPARγ-GDF3 regulatory axis controlling muscle regeneration
transcription profiling by array
Mus musculus
44
24/10/2016
192
-
Long non-coding RNA produced by RNA polymerase V determines boundaries of heterochromatin
RNA-seq of coding RNA
Arabidopsis thaliana
9
24/10/2016
-
-
92
-
Large-scale epigenetic reprogramming is punctuated late during the evolution of pancreatic cancer progression [ChIP-Seq]
ChIP-seq
Homo sapiens
41
24/10/2016
-
215
-
Large-scale epigenetic reprogramming is punctuated late during the evolution of pancreatic cancer progression [RNA-Seq]
RNA-seq of coding RNA
Homo sapiens
8
24/10/2016
-
-
222
-
Large-scale epigenetic reprogramming is punctuated late during the evolution of pancreatic cancer progression [BS-Seq]
methylation profiling by high throughput sequencing
Homo sapiens
11
24/10/2016
-
167
-
Differences in genome-wide gene expression response in PBMCs between young and old men upon caloric restriction
transcription profiling by array
Homo sapiens
38
24/10/2016
204
-
Hepatic expression data from 2-stage carcinogenesis study in rats
transcription profiling by array
Rattus norvegicus
62
24/10/2016
188
-
Distinct small RNA populations act antagonistically in formation of heterosis
RNA-seq of non coding RNA
Zea mays
31
24/10/2016
-
-
113
-
Transcriptome profiling at neural tube closure site
RNA-seq of coding RNA
Mus musculus
8
24/10/2016
-
146
-
Gene expression in the tail tissue of tadpoles [Rana pirica] by larvae salamander or dragon fly
transcription profiling by array
Rana pirica
14
24/10/2016
138
-
Heterogeneity in early lymphoid compartments [qPCR]
transcription profiling by RT-PCR
Mus musculus
384
23/10/2016
-
217
-
Photomorphogenesis of Arabidopsis seedlings is accompanied by complex alternative splicing alterations
RNA-seq of coding RNA
Arabidopsis thaliana
22
23/10/2016
-
-
103
-
Large-scale epigenetic reprogramming is punctuated late during the evolution of pancreatic cancer progression
ChIP-seq, methylation profiling by high throughput sequencing, RNA-seq of coding RNA
Homo sapiens
60
23/10/2016
-
314
-
The transcriptional profile of human CD8+ lung resident memory T-cells
transcription profiling by array
Homo sapiens
28
23/10/2016
-
205
-
MicroRNA-769-3p down-regulated NDRG1 and enhanced apoptosis in MCF-7 during reoxygenation
transcription profiling by array
Homo sapiens
12
23/10/2016
266
-
Developmental heterogeneity of cardiac fibroblasts does not predict pathological proliferation and activation
RNA-seq of coding RNA
Mus musculus
6
23/10/2016
-
166
-
RNA-seq analysis of cell-line models for monocyte to macrophage transformation: Project 3 of Open Targets - Epigenomes of Cell Lines
RNA-seq of coding RNA
Homo sapiens
24
22/10/2016
-
ENA
409
-
The effect of short-term cold treatment in wheat
transcription profiling by array
Triticum aestivum
8
22/10/2016
-
225
-
Nuclear TIGAR mediates an epigenetic-metabolic loop via Nrf2 for cancer therapeutics resistance
RNA-seq of coding RNA
Homo sapiens
4
22/10/2016
ENA
240
-
Overcoming acquired resistance to BIBW2992 in HCC827, a non-small cell lung cancer cell line by dasatinib
transcription profiling by array
Homo sapiens
3
22/10/2016
-
235
-
Expression data from BNL CL.2 liver cells when cultured with iron, RAW 264.7 macrophages or both
transcription profiling by array
Mus musculus
12
22/10/2016
190
-
Ribosome footprinting upon oxidative stress treatment for wild-type and catalase2 knock-out mutants
RNA-seq of coding RNA
Arabidopsis thaliana
4
21/10/2016
-
ENA
243
-
Transcription profiling by array of trichostatin-A treated gastric cancer cell lines
transcription profiling by array
Homo sapiens
12
21/10/2016
-
332
Transcription profiling of the Arabidopsis tic56-1 import mutant line compared to wild type plants
transcription profiling by array
Arabidopsis thaliana
8
21/10/2016
-
133
-
MOF acetyl transferase regulates transcription and respiration in mitochondria
RNA-seq of coding RNA
Homo sapiens, Mus musculus
19
21/10/2016
-
ENA
211
-
Nanostring nCounter expression analysis of sea lamprey embryos and adult testes (Petromyzon marinus)
transcription profiling by array
Petromyzon marinus
21
21/10/2016
-
119
-
Gene expression data of human mesenchymal stromal cells, fibroblasts and hematopoietic progenitors
transcription profiling by array
Homo sapiens
15
21/10/2016
143
-
Maintenance of Leukemic Cell Identity by the Activity of the Polycomb Complex PRC1
ChIP-seq, RNA-seq of coding RNA
Mus musculus
20
21/10/2016
-
140
-
Maintenance of Leukemic Cell Identity by the Activity of the Polycomb Complex PRC1 (RNA-seq)
RNA-seq of coding RNA
Mus musculus
8
21/10/2016
-
ENA
146
-
Maintenance of Leukemic Cell Identity by the Activity of the Polycomb Complex PRC1 (ChIP-seq)
ChIP-seq
Mus musculus
5
21/10/2016
ENA
155
-
Liver expression data from four mouse strains treated with vehicle or PF-04287881 for seven days
transcription profiling by array
Mus musculus
31
21/10/2016
162
-
RNA sequencing of microglia sorted form tamoxifen treated Sall1CreER/fl and control Sall1fl/fl mice
RNA-seq of coding RNA
Mus musculus
7
19/10/2016
ENA
418
Study of the host response to an influenza virus infection in a mouse model
transcription profiling by array
Mus musculus
3
19/10/2016
-
172
-
RNA-Seq of human embryonic stem cells over expressing NANOS3 and DAZL
RNA-seq of coding RNA
Homo sapiens
9
19/10/2016
ENA
189
Notch targets stem-cell and temporal-programming genes to orchestrate neuroblast tumours
transcription profiling by array
Drosophila melanogaster
8
18/10/2016
-
174
-
Transcription profiling of immature and LPS-matured dendritic cells, sorted for DC-S and DC-L phenotypes
transcription profiling by array
Homo sapiens
4
17/10/2016
-
206
-
Wuschel Related Homeobox 5 (WOX5) induced overexpression in seedling roots of Arabidopsis thaliana
transcription profiling by array
Arabidopsis thaliana
12
16/10/2016
-
223
-
Separated transcriptome analysis of microglial cells and oligodendrocytes in the brain of P4 rats, in intra-uterine growth restriction or control conditions
transcription profiling by array
Rattus norvegicus
12
14/10/2016
-
192
-
Transcription profiling of rat brain at post-natal day 4 and 10 after protein restriction of the mother regimen during gestation
transcription profiling by array
Rattus norvegicus
12
14/10/2016
-
182
-
Transcription profiling by array of the uteruses and placentas of 66H Ch13 and C57B6/J mice
transcription profiling by array
Mus musculus, Mus musculus x Mus spretus
4
14/10/2016
169
-
Genotyping by array: Human Developmental Biology Resource (HDBR) expression resource of prenatal human brain development-SNP data
genotyping by array
Homo sapiens
425
12/10/2016
-
646
-
RNA-seq of coding RNA: Human Developmental Biology Resource (HDBR) expression resource of prenatal human brain development
RNA-seq of coding RNA
Homo sapiens
650
12/10/2016
-
ENA
1806
Transcription profiling by array of human acute lymphoblastic leukemia and normal haemopoietic samples using Agilent Whole Human Genome Oligo Microarrays
transcription profiling by array
Homo sapiens
60
12/10/2016
-
403
Transcriptional profiling of a flpS knock-out strain of Steptococcus suis strain 10
transcription profiling by array
Streptococcus suis
4
11/10/2016
190
-
Copy number variation analysis of Kasumi-1 acute myeloid leukemia cells, U2OS osteosarcoma cells and acute myeloid leukemia cells isolated from a patient
genotyping by array
Homo sapiens
3
10/10/2016
-
199
-
Transcription profiling by array of human endothelial cells from colorectal carcinoma biopsies with high and low GBP-1 expression
transcription profiling by array
Homo sapiens
16
10/10/2016
-
375
-
Identification of Rx2 binding loci in medaka by iDamID-seq
ChIP-seq
Oryzias latipes
4
06/10/2016
-
ENA
230
-
Osteoblasts secrete miRNA-containing extracellular vesicles that enhance expansion of human umbilical cord blood cells
microRNA profiling by high-throughput sequencing
Homo sapiens
2
05/10/2016
-
225
-
Transcriptional effects of a 6h treatment with 2% isoflurane in the anterior cingulate cortex of the 24h old neonatal piglet brain
transcription profiling by array
Sus scrofa
11
04/10/2016
-
246
-
Microarray analysis of gene expression in Rabgef1-knockout and control mouse skin
transcription profiling by array
Mus musculus
4
04/10/2016
-
291
-
Transcription profiling by array of rotenone treated olfactory cells derived from patients with Parkinson’s disease and healthy controls
transcription profiling by array
Homo sapiens
32
04/10/2016
455
-
Transcriptional profiling of wild-type parent MC58 strain and ptsH knock-out mutant in Neisseria meningitidis
transcription profiling by array
Neisseria meningitidis MC58
3
03/10/2016
229
-
Transcription profiling by array of vitamin D modulation of innate immune signalling in Dendritic Cells
transcription profiling by array
Homo sapiens
9
03/10/2016
332
-
ChIP-seq analysis of H3K9me3 levels across the genome for one copy of H3K9M mutant in pombe
ChIP-seq
Schizosaccharomyces pombe
6
03/10/2016
ENA
250
-
Genotyping by array of an esophageal adenocarcinoma cell line, tumour tissue, normal tissue and blood derived from the same patient
genotyping by array
Homo sapiens
5
03/10/2016
324
-
Lactate sensing drives fungal immune evasion
RNA-seq of coding RNA
Candida albicans
15
03/10/2016
-
ENA
278
-
Transcription profiling of KHYG1 leukemia cells to investigate the mechanism of apoptosis induced by the Fyn inhibitor pyrazolo[3,4-d]pyrimidine
transcription profiling by array
Homo sapiens
6
03/10/2016
293
-
Systems toxicological assessment of a mentholated heat-not-burn modified risk tobacco product in a 90-day OECD 413 rat inhalation study demonstrates reduced exposure effects and provides mechanistic insights
transcription profiling by array
Rattus norvegicus
203
03/10/2016
327
-
Evaluation of the Tobacco Heating System 2.2. Part 3: 90-day OECD 413 rat inhalation study with systems toxicology endpoints demonstrates reduced exposure effects for modified risk tobacco product, THS 2.2
transcription profiling by array
Rattus norvegicus
181
03/10/2016
313
-
micro RNA profiling by array of KIT/PDGFRA mutant and wild type gastrointestinal stromal tumors
microRNA profiling by array
Homo sapiens
13
03/10/2016
-
248
-
Transcriptome sequencing of the Cassava (Manihot esculenta) latex parasite Phytomonas francai
RNA-seq of coding RNA
Phytomonas francai
2
02/10/2016
-
ENA
201
-
Gene expression and alternative splicing analysis of breast carcinoma cells
RNA-seq of coding RNA
Homo sapiens
1
01/10/2016
ENA
349
-
Whole transcriptome profiling of 63 breast cancer tumours
RNA-seq of coding RNA
Homo sapiens
63
01/10/2016
-
ENA
825
-
All trans-retinoic acid (ATRA) effect on triple negative (TNBC), HER2 positive, and luminal primary breast tumors
transcription profiling by array
Homo sapiens
8
01/10/2016
-
321
-
Gene-expression profiling of SEPN1 knockout or wild type mice injected with either ERO1 or PBS
transcription profiling by array
Mus musculus
8
01/10/2016
190
-
Protective vaccination against blood-stage malaria of Plasmodium chabaudi: differential gene expression in the liver of Balb/c mice towards the end of crisis phase
transcription profiling by array
Mus musculus
12
01/10/2016
-
177
MAGE-seq E.coli infA amplicon high-throughput genotyping data, mutants from Kelsic et al. Cell Systems, 2016
genotyping by high throughput sequencing
Escherichia coli
176
01/10/2016
-
ENA
247
-
Hepatic Deletion of Janus Kinase 2 Counteracts Inflammation, Oxidative Stress and Liver Cancer Formation in Growth Hormone Transgenic Mice
transcription profiling by array
Mus musculus
24
01/10/2016
-
287
Differentially expressed genes upon melatonin treatment on Plasmodium falciparum infected red blood cells
RNA-seq of coding RNA
Plasmodium falciparum 3D7
12
01/10/2016
-
ENA
191
-
Gene expression changes upon Rbl2 knockdown during neuroectoderm specification
transcription profiling by array
Homo sapiens
6
01/10/2016
175
-
Regulation of the cardiac transcriptome by the E3 ubiquitin ligase Huwe1
transcription profiling by array
Mus musculus
6
30/09/2016
-
157
Akkermanisa muciniphila response to oxygen exposure
RNA-seq of coding RNA
Akkermansia muciniphila ATCC BAA-835
15
30/09/2016
ENA
167
-
Single-cell RNA sequencing of mouse embryonic stem cells expressing 2-cell stage markers MERVL and Zscan4
RNA-seq of coding RNA from single cells
Mus musculus
384
30/09/2016
-
ENA
525
-
microRNA profiling of primary human keratinocytes and primary human dermal fibroblasts
microRNA profiling by array
Homo sapiens
6
30/09/2016
176
-
human SU-DHL-5 and TMD-8 B-lymphome cell line subclones
DNA-seq
Homo sapiens
5
30/09/2016
-
ENA
186
-
human HG-3 B-lymphome cell line subclones
transcription profiling by array
Homo sapiens
7
30/09/2016
-
204
-
Transcriptome analysis of HUVEC
RNA-seq of coding RNA
Homo sapiens
4
30/09/2016
ENA
240
-
Extensive transcriptome analysis identifies essential genes sustaining intestinal invasion by Entamoeba histolytica
RNA-seq of coding RNA
Entamoeba histolytica
12
30/09/2016
-
ENA
134
-
Jinfukang enhances the pro-apoptotic activity of cisplatin via activation of AIFM2 in human lung cancer cells
RNA-seq of coding RNA
Homo sapiens
8
30/09/2016
-
ENA
250
-
Transcription profiling of effected genes by PAD2 and compound 1B8 in colon cancer SW480 cells
transcription profiling by array
Homo sapiens
12
30/09/2016
-
210
-
Transcription profiling by array of natural killer cells from chronic lymphocytic lymphoma patients and healthy controls
transcription profiling by array
Homo sapiens
15
30/09/2016
-
251
-
Transcription profiling by array of ormal prostates, hyperplastic prostates and prostate tumors isolated from PSA-Cre;Pten-loxP/loxP mouse prostate cancer model
transcription profiling by array
Mus musculus
19
30/09/2016
197
-
Transcription profiling by array of 457 human tissue samples from patients with various pancreatic neoplasms
transcription profiling by array
Homo sapiens
457
30/09/2016
945
-
mRNA-seq of nuclear RNA extracted from T4 and T5 neurons of D. melanogaster
RNA-seq of coding RNA
Drosophila melanogaster
2
30/09/2016
-
92
-
Effects of digested onion extracts on intestinal gene expression using rat intestine slices
transcription profiling by array
Rattus norvegicus
12
29/09/2016
-
149
Expression profiling HeLa DOCK6 knockout clones 1 and 45 compared to wild type cells
transcription profiling by array
Homo sapiens
9
29/09/2016
-
137
-
Gene expression profiling of AOS Patient fibroblasts against Control fibroblasts
transcription profiling by array
Homo sapiens
9
29/09/2016
-
194
DNA methylation profiling of people of Indo-European and Dravidian ethnicity living in India
methylation profiling by array
Homo sapiens
40
29/09/2016
-
180
-
Clinical and molecular characterization of a de novo 19p13.3 microdeletion
genotyping by array
Homo sapiens
3
29/09/2016
-
160
-
Transcription profiling of primary mouse hepatocytes under different culture conditions
transcription profiling by array
Mus musculus
46
28/09/2016
-
326
The transcriptional signature of human ovarian carcinoma macrophages is associated with extracellular matrix reorganization
RNA-seq of coding RNA
Homo sapiens
5
27/09/2016
-
ENA
273
-
Natural variation of transcriptional response to mild drought in growing Arabidopsis leaves
RNA-seq of coding RNA
Arabidopsis thaliana
186
26/09/2016
ENA
449
-
Identification of proteins interacting with lncRNA Braveheart in mouse using protein microarray
proteomic profiling by array
Mus musculus
2
26/09/2016
-
179
-
Transcriptome analysis upon oxidative stress treatment for wild-type and catalase2 knock-out mutants
RNA-seq of coding RNA
Arabidopsis thaliana
4
26/09/2016
-
ENA
193
-
Transcription profiling of Set2 deletion in yeast to investigate how H3K36 methylation affects mRNA transcription during carbon source shifts
transcription profiling by array
Saccharomyces cerevisiae
12
25/09/2016
-
192
-
Transcription profiling of human endothelial cells treated with Low Molecular Weight Fucoidan (LMWF)
transcription profiling by array
Homo Sapiens
36
25/09/2016
-
187
-
Transcription profiling by array of FOXP3 overexpression in resting and activated mouse CD4+ T cells
transcription profiling by array
Mus musculus
12
24/09/2016
231
Single-cell RNA-seq analysis of human pancreas from healthy individuals and type 2 diabetes patients
RNA-seq of coding RNA from single cells
Homo sapiens
3514
22/09/2016
ENA
3287
Whole-islet RNA-sequencing analysis of human pancreas from healthy individuals and type 2 diabetes patients
RNA-seq of coding RNA
Homo sapiens
7
22/09/2016
ENA
962
Transcription profiling of mouse osteoblasts with mesenchymal-specific homozygous deletion of Sbds against wild type counterparts in a model studying human leukemia predisposition syndromes
transcription profiling by array
Mus musculus
6
22/09/2016
-
232
Comparative genomic hybridization by array of two epithelial cell lines (16HBE14o- and T84) and control DNA from European Hapmap cell lines
comparative genomic hybridization by array
Homo sapiens
2
22/09/2016
-
306
-
Gene expression changes in the periventricular white matter of neonatal piglets at a defined 48h time point following a hypoxic-ischemic insult: a comparison of piglets left untreated and those treated with a remote post-conditioning stimulus applied to the hind leg immediately after the insult
transcription profiling by array
Sus scrofa
16
21/09/2016
-
118
-
Genotyping of SNP array in individuals with San ancestry in southeastern Africa
genotyping by array
Homo sapiens
16
21/09/2016
-
131
-
Methylome profiling of glioblastoma biopsies obtained by neuro-navigation in four distinct areas for 10 patients (necrotic zone, tumor zone, interface, and peripheral brain zone)
methylation profiling by array
Homo sapiens
23
19/09/2016
256
-
aCGH profiling of glioblastoma biopsies obtained by neuro-navigation in four distinct areas for 10 patients (necrotic zone, tumor zone, interface, and peripheral brain zone)
comparative genomic hybridization by array
Homo sapiens
33
19/09/2016
-
242
-
Transcriptome profiling of glioblastoma biopsies obtained by neuro-navigation in four distinct areas for 10 patients (necrotic zone, tumor zone, interface, and peripheral brain zone)
transcription profiling by array
Homo sapiens
37
19/09/2016
-
342
-
RNA-seq analysis of Helicobacter cinaedi ATCC BAA-847 under microaerobic and aerobic culture conditions
RNA-seq of coding RNA
Helicobacter cinaedi CCUG 18818 = ATCC BAA-847
39
19/09/2016
ENA
198
-
Transcription profiling by array of Escherichia coli O157:H7 Sakai subjected to an abrupt downshift in temperature and water activity at multiple time points
transcription profiling by array
Escherichia coli
27
16/09/2016
286
-
ChIP-Seq of LET-418::3xFLAG in mixed stage early C.elegans embryos
ChIP-seq
Caenorhabditis elegans
3
12/09/2016
ENA
238
-
Transcription profiling by high throughput sequencing of Caenorhabditis elegans Mi2-depleted embryos at 24- and 100-cell stages
RNA-seq of coding RNA
Caenorhabditis elegans
23
12/09/2016
-
ENA
224
ATAC-seq of Oesophageal Cell Lines
DNA-seq
Homo sapiens
3
12/09/2016
ENA
273
-
Transcription profiling of poplar (Populus x canescens) leaves and roots under phosphate deprivation
transcription profiling by array
Populus tremula x Populus alba
18
11/09/2016
259
-
Gene expression profile of Huh7 cells upon knock-down of FOXA2 or FOXA2-DS-S
transcription profiling by array
Homo sapiens
9
10/09/2016
-
244
-
Whole genome sequencing of oesophageal tumour tissue and peripheral blood mononuclear cells (PBMC) from a patient with oesophageal adenocarcinoma
DNA-seq
Homo sapiens
2
09/09/2016
-
ENA
281
-
ChIP-seq experiment on mouse neural stem cells (NS5 cell line) to generate a genome-wide map of RBPJ binding to chromatin
ChIP-seq
Mus musculus
1
09/09/2016
ENA
238
-
Transcription profiling by array of NS5 mouse neuronal progenitor cells overexpressing MyT1
transcription profiling by array
Mus musculus
6
09/09/2016
228
RNA-seq of Notch signalling inhibition in NS5
RNA-seq of coding RNA
Mus musculus
2
09/09/2016
-
222
-
ChIP-Seq MyT1-HA in NS5
ChIP-seq
Mus musculus
1
09/09/2016
ENA
204
-
Lipid biosynthesis coordinates a Mitochondrial to Cytosolic Stress Response
transcription profiling by array
Caenorhabditis elegans
12
08/09/2016
215
-
DNA methylation alternations in the offspring adipose from chromium restriction diet dams
methylation profiling by array
Mus musculus
6
08/09/2016
175
-
ChIP-seq-based analysis of differential K27me3 coverage in neuroblastoma cell lines treated with epigenetic drugs
ChIP-seq
Homo sapiens
12
08/09/2016
-
213
-
Global transcriptome analysis in the MYCN-amplified neuroblastoma cell line IMR5-75 upon inducible MYCN-knockdown
RNA-seq of coding RNA
Homo sapiens
12
08/09/2016
-
-
106
-
DNA methylation analysis of neuroblastoma cell lines treated with epigenetic drugs
methylation profiling by array
Homo sapiens
8
08/09/2016
193
-
RNA expression analysis of neuroblastoma cell lines treated with epigenetic drugs
RNA-seq of coding RNA
Homo sapiens
16
08/09/2016
-
-
112
-
Strand-oriented RNAseq of LNCaP prostate cancer cells in culture for 48 h in the absence of androgen
RNA-seq of coding RNA
Homo sapiens
2
08/09/2016
-
-
137
-
MiR-148a Functions as a Tumor Suppressor by Targeting CCK-BR via Inactivating STAT3 and Akt in Human Gastric Cancer
transcription profiling by array
Homo sapiens
56
08/09/2016
370
-
HIPSTR lncRNA knockdown in HEK293 and H1BP cells
transcription profiling by array
Homo sapiens
18
08/09/2016
-
177
-
HIPSTR lncRNA knockdown in H1BP cells
transcription profiling by array
Homo sapiens
9
08/09/2016
-
145
-
HIPSTR lncRNA knockdown in HEK293 cells
transcription profiling by array
Homo sapiens
9
08/09/2016
-
145
-
Primary neuroblastoma tumors
transcription profiling by array, methylation profiling by array
Homo sapiens
210
08/09/2016
374
-
RNA expression data from primary neuroblastoma tumors
transcription profiling by array
Homo sapiens
105
08/09/2016
218
-
DNA methylation data from primary neuroblastoma tumors
methylation profiling by array
Homo sapiens
105
08/09/2016
230
-
Regulation of the biofilm-specific genes circuitry in Candida albicans by a novel histone H3 variant
transcription profiling by array
Candida albicans
8
08/09/2016
153
-
Gene expression analysis of human adenomas
RNA-seq of coding RNA
Homo sapiens
14
08/09/2016
-
-
226
-
Regulators of NRAS-mediated transformation and melanoma tumor maintenance
transcription profiling by array
Homo sapiens
6
08/09/2016
-
322
-
Treatment with GC/RA and combination with AZA/SAHA in MYC amplified and BRG1 mutant lung cancer cell lines
transcription profiling by array, methylation profiling by array
Homo sapiens
102
08/09/2016
328
-
Identification of expresion patterns after treatment with GC/RA and combination with AZA/SAHA in MYC amplified and BRG1 mutant lung cancer cell lines
transcription profiling by array
Homo sapiens
81
08/09/2016
233
-
Patterns of changes in DNA global methylation following the treatment with GC/RA and with GC/RA plus AZA/SAHA in MYC amplified and BRG1 mutant lung cancer cell lines
methylation profiling by array
Homo sapiens
21
08/09/2016
-
156
-
Tbr2 and Neurog2 occupancy and transcriptional profiling of control and Tbr2 knockout E14.5 cerebral cortices
ChIP-seq, transcription profiling by array
Mus musculus
9
08/09/2016
122
-
Tbr2 and Neurog2 transcription factor binding sites in E14.5 WT cerebral cortices
ChIP-seq
Mus musculus
3
08/09/2016
-
129
-
Transcriptional profiling of E14.5 control and Tbr2 fl/fl;Foxg1::Cre cortices
transcription profiling by array
Mus musculus
6
08/09/2016
100
-
Transcriptional targets of oncogenic RAS proteins that mediate their ability to induce cellular transformation
transcription profiling by array
Homo sapiens
12
08/09/2016
-
253
-
Regulation of GLI underlies a role for BET bromodomains in pancreatic cancer growth and the tumor microenvironment
transcription profiling by array
Homo sapiens
40
08/09/2016
-
227
-
Chromatin maps of human ASXL1, FOXK1 and O-GlcNAc
ChIP-seq
Homo sapiens
5
08/09/2016
-
105
-
Cardiac aldosterone regulated genes in mice
transcription profiling by array
Mus musculus
10
08/09/2016
117
-
Transcription profiling of 3T3-L1 pre-adipocytes treated with Alda-1 to study the role of the PKCepislon-ALDH2 pathway in adipocyte differentiation
transcription profiling by array
Mus musculus
2
07/09/2016
-
171
-
RNA-seq of human HeLa cell
RNA-seq of coding RNA
Homo sapiens
2
07/09/2016
-
151
-
Using AmpliSeq we have performed quantitative analysis of 20,803 genes in Negative control precursor-miR (NC-Pre-miR) and pre-miR-17 transfected Rheumatoid arthritis Synovial Fibroblasts (RASFs)
RNA-seq of coding RNA
Homo sapiens
4
07/09/2016
-
-
128
-
MODD mediates deactivation and degradation of OsbZIP46 to negatively regulate ABA signaling and drought resistance in rice
RNA-seq of coding RNA
Oryza sativa Japonica Group
4
07/09/2016
-
148
-
Cytokine-independent detection of antigen-specific germinal center T follicular helper (Tfh) cells in immunized non-human primates using a live cell Activation Induced Marker (AIM) technique
RNA-seq of coding RNA
Macaca mulatta
5
07/09/2016
-
-
108
-
ADTRP siRNA Microarray Data in HepG2 Cell Line
transcription profiling by array
Homo sapiens
6
07/09/2016
126
-
Differential production of Type I IFN determines the reciprocal levels of IL-10 and proinflammatory cytokines produced by C57BL/6 and BALB/c macrophages
transcription profiling by array
Mus musculus
36
07/09/2016
-
135
-
Gene expression linked to sleep homeostasis in murine cortex
transcription profiling by array
Mus musculus
65
07/09/2016
145
-
m6A RNA methylation promotes XIST-mediated transcriptional repression
other
Homo sapiens
7
07/09/2016
-
123
-
Characterization of a P-REX1 gene signature in breast cancer cells
transcription profiling by array
Homo sapiens
24
07/09/2016
234
-
Effect of anti-IL-15 administration on T cell and NK cell homeostasis in rhesus macaques
RNA-seq of coding RNA
Macaca mulatta
72
07/09/2016
131
-
Effect of anti-IL-15 administration on T cell and NK cell homeostasis in rhesus macaques (TEM)
transcription profiling by array
Macaca mulatta
23
07/09/2016
103
-
Effect of anti-IL-15 administration on T cell and NK cell homeostasis in rhesus macaques (TCM)
transcription profiling by array
Macaca mulatta
49
07/09/2016
161
-
Effect of fipronil on the thyroid gland transcriptome in the rat
transcription profiling by array
Rattus norvegicus
20
07/09/2016
118
-
RNA-seq analysis of IMQ-treated wt and Trex2-/- skin
RNA-seq of coding RNA
Mus musculus
11
07/09/2016
-
-
95
-
The bromodomain protein BRD4 regulates splicing during heat shock
RNA-seq of coding RNA
Homo sapiens
8
07/09/2016
-
-
99
-
Skeletal muscle derived stem cell implantation therapy in a rat model of erectile dysfunction
transcription profiling by array
Rattus norvegicus
2
07/09/2016
99
-
Genome wide Affymetric Microarray analysis for RIPK1 dependent inflammatory changes in Bone Marrow Derived Macrophages (BMDMs)
transcription profiling by array
Mus musculus
4
07/09/2016
132
-
The Smaug RNA-binding protein is essential for microRNA synthesis during the Drosophila maternal-to-zygotic transition
RNA-seq of non coding RNA
Drosophila melanogaster
18
06/09/2016
-
94
-
Unexpected role of interferon-g in regulating neuronal connectivity and social behavior
RNA-seq of coding RNA
Mus musculus
6
06/09/2016
-
-
84
-
Brain transcriptome of honeybees (Apis mellifera) infected by Nosema ceranae and/or Black Queen Cell Virus
RNA-seq of coding RNA
Apis mellifera
11
06/09/2016
-
-
96
-
Integrative genomics outlines a biphasic glucose response and a ChREBP-RORγ axis regulating proliferation in β-cells
ChIP-seq, RNA-seq of coding RNA
Rattus norvegicus
54
06/09/2016
-
139
-
DNA Microarray Platform for Detection and Surveillance of Viruses Transmitted by Small Mammals and Arthropods
transcription profiling by array
Aedes aegypti, Aedes albopictus, Bussuquara virus, Cacipacore virus, Chikungunya virus, Chlorocebus sabaeus, Dengue virus, Dengue virus 1, Dengue virus 2, Dengue virus 3, Dengue virus 4, Flaviviridae, Flavivirus, Guaroa virus, Homo sapiens, Iguape virus, Ilheus virus, Mayaro virus, Mucambo virus, Oropouche virus, Piry virus, Rhabdoviridae, Rio Mamore virus, Rocio virus, St. Louis encephalitis virus, Togaviridae, West Nile virus, Yellow fever virus, Zika virus
87
06/09/2016
186
-
DNA Microarray Platform for Detection and Surveillance of Viruses Transmitted by Small Mammals and Arthropods
transcription profiling by array
Aedes albopictus, Chikungunya virus, Dengue virus 1, Dengue virus 2, Dengue virus 3, Dengue virus 4, Zika virus
7
06/09/2016
101
-
Genetic ancestry and natural selection drive population differences in immune responses to pathogens in humans
RNA-seq of coding RNA
Homo sapiens
503
06/09/2016
-
309
-
Circadian Epigenomic Control of Skeletal Muscle Fuel Metabolism by HDAC3
ChIP-seq, other, RNA-seq of coding RNA
Mus musculus
14
06/09/2016
-
118
-
Next generation sequencing comparing effects of vehicle, PTH, and YKL-05-093 in Ocy454 cells
RNA-seq of coding RNA
Mus musculus
6
06/09/2016
-
100
-
Next generation sequencing analysis of epididymal adipose tissue (III)
RNA-seq of coding RNA
Mus musculus
8
06/09/2016
-
-
123
-
Next generation sequencing analysis of epididymal adipose tissue (II)
RNA-seq of coding RNA
Mus musculus
9
06/09/2016
-
-
116
-
A pre-mRNA Alternative Splicing Program Promotes Adipose Tissue Thermogenesis
RNA-seq of coding RNA
Mus musculus
23
06/09/2016
-
-
79
-
Next generation sequencing analysis of epididymal adipose tissue (I)
RNA-seq of coding RNA
Mus musculus
6
06/09/2016
-
-
93
-
Desiccation Tolerance of Arabidopsis thaliana seeds
RNA-seq of coding RNA
Arabidopsis thaliana
24
06/09/2016
-
-
123
-
Genome-wide landscape and functional necessity of heart enhancers
RNA-seq of coding RNA
Mus musculus
20
06/09/2016
-
125
-
RNA-Seq of Lgr6 positive and negative cells in mouse mammary gland
RNA-seq of coding RNA
Mus musculus
4
06/09/2016
-
-
95
-
Etiology matters - Comparing Genomic DNA Methylation Patterns in Three Rat Models of Acquired Epilepsy
methylation profiling by high throughput sequencing, RNA-seq of coding RNA
Rattus norvegicus
20
06/09/2016
-
-
85
-
Etiology matters - Comparing Genomic DNA Methylation Patterns in Three Rat Models of Acquired Epilepsy (Amygdala stimulation – mRNA-seq)
RNA-seq of coding RNA
Rattus norvegicus
10
06/09/2016
-
-
83
-
Etiology matters - Comparing Genomic DNA Methylation Patterns in Three Rat Models of Acquired Epilepsy (Amygdala stimulation – MBD-seq)
methylation profiling by high throughput sequencing
Rattus norvegicus
10
06/09/2016
-
-
84
-
Etiology matters - Comparing Genomic DNA Methylation Patterns in Three Rat Models of Acquired Epilepsy
methylation profiling by high throughput sequencing, RNA-seq of coding RNA
Rattus norvegicus
20
06/09/2016
-
-
88
-
Etiology matters - Comparing Genomic DNA Methylation Patterns in Three Rat Models of Acquired Epilepsy (TBI – mRNA-seq)
RNA-seq of coding RNA
Rattus norvegicus
10
06/09/2016
-
-
82
-
Etiology matters - Comparing Genomic DNA Methylation Patterns in Three Rat Models of Acquired Epilepsy (TBI – MBD-seq)
methylation profiling by high throughput sequencing
Rattus norvegicus
10
06/09/2016
-
-
86
-
Genome-wide identification of Drought-responsive Regulatory Coding and Non-coding Transcripts from Oryza sativa L. by deep RNA sequencing
RNA-seq of coding RNA, RNA-seq of non coding RNA
Oryza sativa Indica Group
27
06/09/2016
-
-
131
-
Widespread shortening of 3' untranslated regions and increased exon inclusion characterize the human macrophage response to infection
RNA-seq of coding RNA, RNA-seq of non coding RNA
Homo sapiens
234
06/09/2016
-
214
-
Widespread shortening of 3’ untranslated regions and increased exon inclusion characterize the human macrophage response to infection [mRNA]
RNA-seq of coding RNA
Homo sapiens
198
06/09/2016
-
135
-
Widespread shortening of 3’ untranslated regions and increased exon inclusion characterize the human macrophage response to infection [miRNA]
RNA-seq of non coding RNA
Homo sapiens
36
06/09/2016
-
121
-
Gene expression profiling of mice given orally a supplement with special amino acid composition of Vespa larval saliva origin
transcription profiling by array
Mus musculus
78
06/09/2016
178
-
Gene expression profiling of mice given orally a supplement with special amino acid composition of Vespa larval saliva origin (DW vs CAAM)
transcription profiling by array
Mus musculus
36
06/09/2016
141
-
Gene expression profiling of mice given orally a supplement with special amino acid composition of Vespa larval saliva origin (DW vs VAAM)
transcription profiling by array
Mus musculus
42
06/09/2016
135
-
Gene expression induced in HEK293 by treatment with the differentiating agents all-trans retinoic acid (tRA) and N6,2'-O-dibutyryl-cAMP (cAMP)
transcription profiling by array
Homo sapiens
6
06/09/2016
-
125
-
RPF-1 transcription factor coordinates expression of developmental genes in inducible HEK293/RPF-1 stable transfectants
transcription profiling by array
Homo sapiens
12
06/09/2016
-
116
-
ChIP-chip from HEK293-RPF-1 stable transfectants expressing the HA-tagged RPF-1 transcription factor
ChIP-seq
Homo sapiens
4
06/09/2016
113
-
Identification of microRNAs and transcript targets in Jatropha seeds
RNA-seq of coding RNA, RNA-seq of non coding RNA
Jatropha curcas
4
06/09/2016
-
94
-
Slicer activity of Arabidopsis AGO1 in siRNA biogenesis and miRNA target decay
microRNA profiling by high-throughput sequencing
Arabidopsis thaliana
48
05/09/2016
-
ENA
319
-
Steinernema carpocapsae Breton small RNA sequencing insect in vitro simulation system, from "The genome, transcriptome, and proteome of the nematode Steinernema carpocapsae: evolutionary signatures of a pathogenic lifestyle"
RNA-seq of non coding RNA
Steinernema carpocapsae
6
05/09/2016
-
-
82
-
Gene expression profiles in mouse embryonic fibroblasts (MEFs) derived from BCL11B-KO mice
transcription profiling by array
Mus musculus
2
05/09/2016
145
-
DNA Microarray Platform for Detection and Surveillance of Viruses Transmitted by Small Mammals and Arthropods
transcription profiling by array
Aedes aegypti, Aedes albopictus, Bussuquara virus, Cacipacore virus, Chikungunya virus, Chlorocebus sabaeus, Dengue virus, Dengue virus 1, Dengue virus 2, Dengue virus 3, Dengue virus 4, Flaviviridae, Flavivirus, Guaroa virus, Homo sapiens, Iguape virus, Ilheus virus, Mayaro virus, Mucambo virus, Oropouche virus, Piry virus, Rhabdoviridae, Rio Mamore virus, Rocio virus, St. Louis encephalitis virus, Togaviridae, West Nile virus, Yellow fever virus
80
05/09/2016
131
-
Pre-T cells from control and Zfp36l1, Zfp36l2 double conditional knockout mice
other, RNA-seq of coding RNA
Mus musculus
15
05/09/2016
-
-
85
-
Pre-T cells from control and Zfp36l1, Zfp36l2 double conditional knockout mice. [iCLIP]
other
Mus musculus
3
05/09/2016
-
-
86
-
RNAseq of pre-T cells from control and Zfp36l1, Zfp36l2 double conditional knockout mice
RNA-seq of coding RNA
Mus musculus
12
05/09/2016
-
-
138
-
Global miRNA expression in small bowel neuroendocrine tumors (SBNET) and their lymph node/liver metastases
transcription profiling by array
Homo sapiens
90
05/09/2016
235
-
Adenosine-to-inosine RNA editing controls cathepsin S expression in atherosclerosis by enabling HuR-mediated post-transcriptional regulation
RNA-seq of coding RNA
Homo sapiens
38
05/09/2016
-
-
217
-
Effect of high CO2 levels and low temperature storage on table grapes quality harvested at two maturity stages
transcription profiling by array
Vitis vinifera
18
04/09/2016
101
-
Integrated mRNA and miRNA expression profiling in blood reveals candidate biomarkers associated with endurance exercise in horse
transcription profiling by array
Equus caballus
150
04/09/2016
142
-
Integrated mRNA and miRNA expression profiling in blood reveals candidate biomarkers associated with endurance exercise in horse (miRNA)
transcription profiling by array
Equus caballus
75
04/09/2016
135
-
Integrated mRNA and miRNA expression profiling in blood reveals candidate biomarkers associated with endurance exercise in horse (mRNA)
transcription profiling by array
Equus caballus
75
04/09/2016
124
-
Response of C2C12-hN1∆ECD to DAPT washout
RNA-seq of coding RNA
Mus musculus
3
04/09/2016
-
111
-
Differential gene expression analysis of follistain treated skeletal muscle
RNA-seq of coding RNA
Mus musculus
14
03/09/2016
-
107
-
Transcriptome profiling of 15 conditions for Escherichia coli selected from optimal experiment design, and targeted experimentation to increase functional coverage in omics dataset
RNA-seq of coding RNA
Escherichia coli BW25113, Escherichia coli str. K-12 substr. MG1655
132
03/09/2016
-
159
-
Targeted experimentation to increase functional coverage in omics dataset
RNA-seq of coding RNA
Escherichia coli BW25113
87
03/09/2016
-
97
-
Transcriptome profiling of 15 conditions for Escherichia coli selected from optimal experiment design
RNA-seq of coding RNA
Escherichia coli str. K-12 substr. MG1655
45
03/09/2016
-
195
-
Profile of miRNA in Bovine corpora lutea
transcription profiling by array
Bos taurus
6
03/09/2016
113
-
Microarray skeletal muscle miR-499 overexpressing mice
transcription profiling by array
Mus musculus
6
03/09/2016
130
-
Effect of MCMV infection on gene expression in ovaries of pregnant and non-pregnant mice
transcription profiling by array
Mus musculus
4
03/09/2016
128
-
The RNA binding protein SYNCRIP is a component of the hepatocyte exosomal machinery controlling microRNAs sorting
RNA-seq of non coding RNA
Mus musculus
30
02/09/2016
-
ENA
238
-
An integrative transcriptomic atlas of organogenesis in human embryos
RNA-seq of coding RNA
Homo sapiens
27
02/09/2016
-
464
-
An ectopic CTCF binding element disturbs Vδ usage at the mouse Tcra-Tcrd locus by regulating contact between Vδ and Dδ gene segments
other
Mus musculus
12
02/09/2016
-
103
-
Widespread natural variation of DNA methylation within angiosperms
methylation profiling by high throughput sequencing, RNA-seq of coding RNA, RNA-seq of non coding RNA
Beta vulgaris, Brachypodium distachyon, Brassica rapa, Cannabis sativa, Citrus clementina, Cucumis sativus, Erythranthe guttata, Eucalyptus grandis, Eutrema salsugineum, Fragaria vesca, Lotus japonicus, Malus domestica, Manihot esculenta, Medicago truncatula, Panicum hallii, Panicum virgatum, Populus trichocarpa, Prunus persica, Ricinus communis, Setaria viridis, Sorghum bicolor, Theobroma cacao, Vitis vinifera
34
02/09/2016
-
179
-
Progenitor Cell Marker Aldehyde Dehydrogenase 1a3 Defines a Subset of Failing Pancreatic Beta Cells in Diabetic Mice
RNA-seq of coding RNA
Mus musculus
15
02/09/2016
-
105
-
HDAC3 modulates enhancer activity to regulate terminal B cell differentiation
RNA-seq of coding RNA
Mus musculus
8
02/09/2016
-
-
88
-
Epigenetic regulation in the elderly over time
methylation profiling by array
Homo sapiens
180
02/09/2016
243
-
The analysis of differential gene expression after remote ischemic preconditioning of renal ischemia reperfusion injury
transcription profiling by array
Sus scrofa
15
02/09/2016
105
-
Promoter array characterization of AR binding sites
ChIP-chip by tiling array
Homo sapiens
2
02/09/2016
143
-
Transcriptome Profiling of Rattus norvegicus Embryonic Stem Cells by RNA-Sequencing
RNA-seq of coding RNA
Rattus norvegicus
2
02/09/2016
-
-
81
-
Expression data from Northeastern Indigenous and Large White longissimus dorsi
transcription profiling by array
Sus scrofa
6
02/09/2016
121
-
Dysregulated immune system networks in war veterans with Post-Traumatic Stress Disorder (PTSD) is an outcome of altered miRNA expression
microRNA profiling by array
Homo sapiens
12
01/09/2016
281
-
MicroRNA profiling by array of macrophages infected with Leishmania RNA virus containing Leishmania guyanensis and virus-free parasites
microRNA profiling by array
Mus musculus
8
01/09/2016
108
-
RNA-seq of coding RNA performed on the root tips of Arabidopsis rtel1 mutants and Col-1
RNA-seq of coding RNA
Arabidopsis thaliana
6
01/09/2016
-
ENA
125
Chronic activation of hepatic Nrf2 has no major effect on fatty acid and glucose metabolism in adult mice
transcription profiling by array
Mus musculus
24
01/09/2016
131
-
Transcriptome analysis of 6 hours post fertilization mecp2-null versus wild type zebrafish embryos
RNA-seq of coding RNA
Danio rerio
6
01/09/2016
-
-
93
-
Enhancer invasion shapes MYCN dependent transcriptional amplification in neuroblastoma
ChIP-seq, other, transcription profiling by array, RNA-seq of coding RNA
Homo sapiens
79
01/09/2016
353
-
Enhancer invasion shapes MYCN dependent transcriptional amplification in neuroblastoma [ATAC-seq]
other
Homo sapiens
5
01/09/2016
-
186
-
Enhancer invasion shapes MYCN dependent transcriptional amplification in neuroblastoma [ChIP-seq]
ChIP-seq
Homo sapiens
27
01/09/2016
-
162
-
High conservation in transcriptomic and proteomic response of white sturgeon to equipotent concentrations of 2,3,7,8-TCDD, PCB 77, and benzo[a]pyrene
RNA-seq of coding RNA
Acipenser transmontanus
8
01/09/2016
-
101
-
The gene expression analysis of human astrocyte exposure to anti-suprabasin antibody: identification of a novel antibody for neuropsychiatric systemic lupus erythematosus
transcription profiling by array
Homo sapiens
6
01/09/2016
140
-
Changes in RNA expression in human oral cavity carcinoma cells as a result of LDB1 reduction
RNA-seq of coding RNA
Homo sapiens
6
01/09/2016
-
-
129
-
Long‐term engraftment of primary bone marrow stroma promotes hematopoietic reconstitution after transplantation
transcription profiling by array
Mus musculus
6
01/09/2016
131
-
RNA-seq of three brain regions from schizophrenia and bipolar disorder patients and psychiatrically normal individuals
RNA-seq of coding RNA
Homo sapiens
82
01/09/2016
-
ENA
303
GSK8814: a chemical probe fort he ATAD2 bromodomain
transcription profiling by array
Homo sapiens
12
01/09/2016
-
107
-
ChIP-seq. analysis of pan-histone 3 acetylation in Romidepsin treated TCam-2
ChIP-seq
Homo sapiens
3
01/09/2016
-
-
111
-
Transcriptional profile of WT and Mmp10-/- bone marrow-derived macrophages after infection with Pseudomonas aeruginosa
transcription profiling by array
Mus musculus
18
01/09/2016
109
-
Reduced dosage of β-catenin genetically rescues intracardiac anomalies in a Tbx1 conditional null mouse model of 22q11.2 deletion syndrome
transcription profiling by array
Mus musculus
24
01/09/2016
145
-
A Scalable Epitope Tagging Approach for High Throughput ChIP-seq Analysis
ChIP-seq
Homo sapiens
30
01/09/2016
-
96
-
Effect of Imatinib (1microM, 24 hours) on the microRNA repertoire of chronic myeloid leukemia cell line K562
transcription profiling by array
Homo sapiens
6
01/09/2016
162
-
microRNA profiling of Sprague Dawley organs
RNA-seq of non coding RNA
Rattus norvegicus
458
01/09/2016
-
-
92
-
A highly sensitive and robust method for genome-wide 5hmC profiling of rare cell populations
methylation profiling by high throughput sequencing, RNA-seq of coding RNA
Mus musculus
56
01/09/2016
-
199
-
Mouse embryonic lung FOXF1 ChIP-seq analysis
ChIP-seq
Mus musculus
3
01/09/2016
-
92
-
ROSA26Foxf1; Tie2-cre lung gene expression analysis
transcription profiling by array
Mus musculus
6
01/09/2016
-
104
-
Expression data of thermally eluted RNA from human primary fibroblasts with non-targeting or GLD4 siRNA treatment
transcription profiling by array
Homo sapiens
6
01/09/2016
108
-
CircRNAs in Arabidopsis thaliana across the lifespan
RNA-seq of non coding RNA
Arabidopsis thaliana
1
01/09/2016
-
103
-
Expression data from healthy control human peripheral blood mononuclear cells (PBMC) treated with wild-type IL-2 or F42K
transcription profiling by array
Homo sapiens
27
01/09/2016
270
-
Genomic analyses of breast cancer cells: 17β-hydroxysteroid dehydrogenase type 1 induces transcriptional changes in estradiol-dependent and independent manners
transcription profiling by array
Homo sapiens
8
01/09/2016
175
-
Common pathways involved in adipose tissue inflammation and atherosclerosis
transcription profiling by array
Mus musculus
18
01/09/2016
169
-
Gene expression analysis of hematological malignancies and healthy (non-)hematopoietic cell types
transcription profiling by array
Homo sapiens
166
01/09/2016
-
652
-
Conserved imprinting associated with unique epigenetic signatures in the Arabidopsis genus
methylation profiling by high throughput sequencing, RNA-seq of coding RNA
Arabidopsis lyrata
38
01/09/2016
-
142
-
Splicing in gliomas
transcription profiling by array
Homo sapiens
6
01/09/2016
174
-
Expression data from pulmonary arterial endothelial cells treated with siRNA control or siGLS in stiff or soft matrix
transcription profiling by array
Homo sapiens
12
01/09/2016
115
-
Description of the microRNA repertoire of leucocytes of patients suffering from atypical myeloproliferative syndromes
transcription profiling by array
Homo sapiens
30
01/09/2016
164
-
The role of Hoxa9 and Meis1 in development of acute myeloid leukemia (mRNA)
transcription profiling by array
Mus musculus
12
01/09/2016
159
-
Meiosis timecourse Rap1
transcription profiling by array, ChIP-chip by array
Saccharomyces cerevisiae SK1
180
01/09/2016
116
-
Meiosis timecourse Rap1 ChIP-chip
ChIP-chip by array
Saccharomyces cerevisiae SK1
81
01/09/2016
106
-
Meiosis timecourse Rap1-depletion Rap1 ChIP-chip
ChIP-chip by array
Saccharomyces cerevisiae SK1
6
01/09/2016
92
-
Meiosis timecourse Rap1-depletion expression profile
transcription profiling by array
Saccharomyces cerevisiae SK1
18
01/09/2016
99
-
Meiosis timecourse open chromatin dynamics as measured by FAIRE
ChIP-chip by array
Saccharomyces cerevisiae SK1
12
01/09/2016
114
-
Meiosis timecourse expression profile
transcription profiling by array
Saccharomyces cerevisiae SK1
63
01/09/2016
93
-
JNK1 Ablation in Mice Confers Long-term Metabolic Protection from Diet-Induced Obesity at the Cost of Increased Skin Oxidative Damage
transcription profiling by array
Mus musculus
21
01/09/2016
99
-
A network including TGFβ/Smad4, Gata2 and p57 regulates proliferation of mouse hematopoietic stem/progenitor cells
ChIP-seq, transcription profiling by array
Mus musculus
7
01/09/2016
115
-
A network including TGFβ/Smad4, Gata2 and p57 regulates proliferation of mouse hematopoietic stem/progenitor cells [ChIP-seq]
ChIP-seq
Mus musculus
1
01/09/2016
-
-
92
-
Targeting Non-proteolytic Protein Ubiquitination for the Treatment of Diffuse Large B Cell Lymphoma (Affy SNP6.0 Arrays)
comparative genomic hybridization by array
Homo sapiens
5
01/09/2016
-
172
-
A network including TGFβ/Smad4, Gata2 and p57 regulates proliferation of mouse hematopoietic stem/progenitor cells [expression]
transcription profiling by array
Mus musculus
6
01/09/2016
104
-
Alteration of Gene Expression Profile in Spontaneously Hypertensive Rats Treated with Protein Hydrolysate of Blue Mussel (Mytilus edulis) by DNA Microarray Analysis
transcription profiling by array
Rattus norvegicus
3
01/09/2016
94
-
Systems analysis of B16-WT, B16-shTGFb and B16-shVEGF tumor microenvironment 4 or 14 days after tumor inoculation
transcription profiling by array
Mus musculus
38
01/09/2016
-
121
-
Targeting Non-proteolytic Protein Ubiquitination for the Treatment of Diffuse Large B Cell Lymphoma (Agilent Arrays)
transcription profiling by array
Homo sapiens
20
01/09/2016
210
-
Bone marrow micro-environment mediated drug resistance in Acute promyelocytic leukemia
transcription profiling by array
Homo sapiens
7
01/09/2016
170
-
The Gene Expression Profile of Lung Tissue Following Sulfur Mustard Inhalation Exposure in Large Anesthetized Swine
transcription profiling by array
Sus scrofa
28
01/09/2016
118
-
Alterations to the Synaptic Transcriptome in Response to Ethanol-Induced Behavioral Sensitization in DBA/2J Mice
RNA-seq of coding RNA
Mus musculus
24
01/09/2016
-
-
88
-
Urinary Extracellular Vesicles RNA Profile in Clear Cell Renal Cell Carcinoma as Biomarker
transcription profiling by array
Homo sapiens
23
01/09/2016
-
198
-
Gene expression signature of MYB-GATA overexpression plus GATA1 down regulation in undifferentiated or differentiated UT7 cells
transcription profiling by array
Homo sapiens
8
01/09/2016
136
-
PKCδ regulates the transformed growth of K-ras dependent lung cancer cells through regulation of integrin αVβ3 expression
transcription profiling by array
Homo sapiens
24
01/09/2016
183
-
Expression profiling of dexamethasone inducible expression of YFP-CPR5-C in Arabidopsis
transcription profiling by array
Arabidopsis thaliana
12
01/09/2016
114
-
Expression profiling of Col-0 and rps2 treated with Psm:AvrRpt2
transcription profiling by array
Arabidopsis thaliana
15
01/09/2016
121
-
Human Corneal Epithelial Cells (SV40-HCEC) 6h Treatment with 100nM Vitamin D (1,25D3) vs. Vehicle Control
transcription profiling by array
Homo sapiens
2
01/09/2016
108
-
Human Corneal Epithelial Cells (hTCEpi) 6h Treatment with 100nM Vitamin D (1,25D3) vs. Vehicle Control
transcription profiling by array
Homo sapiens
2
01/09/2016
100
-
Chromatin immunoprecipitation and RNA-seq analysis in purified quiescent yeast cells to identify the genomic RNA polymerase II and histone H3 methylation occupancy profiles and the quiescent cell transcriptome
RNA-seq of coding RNA
Saccharomyces cerevisiae
6
01/09/2016
-
-
85
-
Gene expression variation in mediastinal (pulmonary-draining) lymph nodes of heaves-affected horses versus controls
transcription profiling by array
Equus caballus
14
01/09/2016
92
-
Gene expression analysis of TIL rich HPV driven head and neck tumours reveals a distinct B-cell signature when compared to HPV independent tumours
RNA-seq of coding RNA
Homo sapiens
23
01/09/2016
-
265
-
Zonal Gene Expression and Gene Regulatory Network Responses in Centrilobular and Periportal Hepatocytes Following Repeated Exposure to TCDD (2,3,7,8-tetrachlorodibenzo-p-dioxin)
transcription profiling by array
Rattus norvegicus
191
01/09/2016
116
-
Transcriptome Analysis of floral organ in Canna indica by RNA-Seq
RNA-seq of coding RNA
Canna indica
4
01/09/2016
-
92
-
Transcriptome Sequencing and Assembly of Canna indica Flower
RNA-seq of coding RNA
Canna indica
2
01/09/2016
-
85
-
Effect of Itolizumab on gene expression profiles of patients enrolled in phase 2 psoriasis clinical trial study (Study number: T1hAb‐CT1‐001‐07)
transcription profiling by array
Homo sapiens
48
01/09/2016
116
-
Mouse bone marrow stromal cells: before or after total body irradiation
transcription profiling by array
Mus musculus
2
01/09/2016
94
-
Next generation sequencing analysis of DN1 transcriptomes from Wild type, gl/gl and transgenic CD2-Ostm1 gl/gl mice
RNA-seq of coding RNA
Mus musculus
3
01/09/2016
-
-
85
-
Transcription profiling by high throughput sequencing of Arabidopsis cuc2-3 and cuc2gm-4 mutant plants
RNA-seq of coding RNA
Arabidopsis thaliana
9
01/09/2016
ENA
101
-
Genome-wide transcription profiling of oxic and anoxic cultures
RNA-seq of coding RNA
Escherichia coli str. K-12 substr. MG1655
8
01/09/2016
-
-
80
-
Whole genome RNA micro array analysis of Plasmodium berghei sporozoites infected host cells
transcription profiling by array
Homo sapiens
8
01/09/2016
95
-
Study of microRNA associated with metformin’s anti-tumor effect in cholangiocarcinoma
transcription profiling by array
Homo sapiens
8
01/09/2016
183
-
Study of microRNA associated with galectin-9 and anti-tumor effect in cholangiocarcinoma
transcription profiling by array
Homo sapiens
9
01/09/2016
131
-
Construction and characterization of synthetic microRNA cluster for multiplex RNA interference in mammalian cells
RNA-seq of non coding RNA
Homo sapiens
30
01/09/2016
-
108
-
Gene expression profiling of infrequently and frequently dividing cells in the mouse epidermis
transcription profiling by array
Mus musculus
12
01/09/2016
112
-
The cancer cell of origin controls EMT-related tumour heterogeneity
other
Mus musculus
16
01/09/2016
-
149
-
Binary cell fate decision as high-dimensional critical state transition
transcription profiling by array
Mus musculus
10
01/09/2016
95
-
Ribosome profiling analysis of Dengue Virus
other, RNA-seq of coding RNA
Homo sapiens
116
01/09/2016
-
-
101
-
Histone gene regulation in normal and tumor cells
ChIP-seq, transcription profiling by array
Homo sapiens
52
01/09/2016
249
-
Differential response of normal and tumor cells to nucleosome depletion
transcription profiling by array
Homo sapiens
40
01/09/2016
212
-
Histone genes transcription regulators binding in human cancer (U2OS) and normal (hTERT-RPE1) cells
ChIP-seq
Homo sapiens
12
01/09/2016
-
154
-
Deciphering a functional gene network underlying robustness to protein overproduction
transcription profiling by array
Saccharomyces cerevisiae
6
01/09/2016
109
-
Transcriptome of Ameloblastoma using Laser capture microdissection
transcription profiling by array
Homo sapiens
17
01/09/2016
212
-
RNA-seq analysis of the transcriptional response to blue and red light in the extremophilic red alga, Cyanidioschyzon merolae
RNA-seq of coding RNA
Cyanidioschyzon merolae strain 10D
4
01/09/2016
-
-
85
-
DNA methylation profiling of rhabdomyosarcoma tumor samples
methylation profiling by array
Homo sapiens
15
01/09/2016
190
-
Ketamine suppresses hypoxia-induced inflammatory responses in the late-gestation ovine fetal kidney cortex
transcription profiling by array
Ovis aries
15
01/09/2016
103
-
Expression profiling changes during different albescent stages of 'Anji Baicha' (Camellia sinensis)
RNA-seq of coding RNA
Camellia sinensis
9
01/09/2016
-
-
85
-
The effect of FOXO3 knockdown and PDHA1 knockdown on PDAC cell line Panc-1
transcription profiling by array
Homo sapiens
3
01/09/2016
148
-
cGMP inducer effect on cell line Panc-1
transcription profiling by array
Homo sapiens
2
01/09/2016
149
-
Comparative genomic and transcriptomic analyses of the Fuzhuan brick tea-fermentation fungus Aspergillus cristatus
RNA-seq of coding RNA
Aspergillus cristatus
3
01/09/2016
-
86
-
Mitochondrial supplementation at fertilization enhances early developmental outcome
transcription profiling by array
Sus scrofa
11
01/09/2016
92
-
Gene expression array analysis of tumor-propagating cell populations in human osteosarcoma
transcription profiling by array
Homo sapiens
12
01/09/2016
224
-
Active Demethylation of Both Maternal and Paternal Genomes in Mouse Zygotes
methylation profiling by high throughput sequencing
Mus musculus
1
01/09/2016
-
91
-
Expression data from shoots of rice seedlings after inoculation by Sinorhizobium meliloti 1021
transcription profiling by array
Oryza sativa Japonica Group
24
01/09/2016
121
-
Transcriptional profiling of Escherichia coli after addition of CO gas to aerobically and anaerobically growing cells
transcription profiling by array
Escherichia coli
52
01/09/2016
124
-
Aurora kinase inhibition triggers senescence in human melanoma cells
transcription profiling by array
Homo sapiens
42
01/09/2016
-
208
-
HIP1 mediates prostate carcinogenesis and progression through STAT3 signalling
transcription profiling by array
Homo sapiens
24
01/09/2016
-
169
-
Gene expression profiles of esophageal squamous cell carcinoma cell lines
transcription profiling by array
Homo sapiens
16
01/09/2016
207
-
Host pathogen interaction at a transcriptional level
transcription profiling by array
Homo sapiens
17
01/09/2016
86
-
Comparison of acid treated and untreated
transcription profiling by array
Homo sapiens
3
01/09/2016
101
-
Cell type dependent comparison and strain specific comparison
transcription profiling by array
Homo sapiens
14
01/09/2016
113
-
RNA-seq system comparison of Streptomyces lividans TK24 cultivated under micro-scale biolector and reference bioreactor conditions
RNA-seq of coding RNA
Streptomyces lividans
2
31/08/2016
-
ENA
120
-
Transcriptomic analyses of adipocyte differentiation from human mesenchymal stromal-cells (MSC)
RNA-seq of coding RNA
Homo sapiens
4
31/08/2016
-
ENA
202
-
The AmtR regulon of Mycobacterium smegmatis - Transcription profile of an M. smegmatis amtR mutant (JR258) compared to M. smegmatis mc2155 (wild-type)
transcription profiling by array
Mycobacterium smegmatis
4
31/08/2016
111
-
In vitro assessment of acute exposure of THS2.2 aerosol on organotypic acute human nasal tissue cultures
transcription profiling by array
Homo sapiens
371
31/08/2016
281
-
Transcription profiling by array of induced naïve pluripotency in H9 human embryonic stem cells
transcription profiling by array
Homo sapiens
6
31/08/2016
174
-
Transcription profiling of Th17 cells from mice expressing Mekk1 without catalytic domain (Map3k1∆KD) and control mice
transcription profiling by array
Mus musculus
2
31/08/2016
-
139
-
Transcription profiling by array of a human breast cancer cell line treated with small molecule inhibitors of the Hypoxia inducible factor (HIF) hydroxylases
transcription profiling by array
Homo sapiens
13
31/08/2016
-
197
-
RNA-seq of coding RNA of wheat heads from 3, 6, 12, 24, 36, and 48 hours after inoculation of fungal pathogen Fusarium graminearum or mock inoculation
RNA-seq of coding RNA
Triticum aestivum
72
31/08/2016
-
ENA
536
Molecular characterization of acute lymphoblastic leukemia with CRLF2 overexpression in childhood
RNA-seq of coding RNA
Homo sapiens
4
30/08/2016
-
ENA
151
-
Dual readout of two histone modifications at the same time with synthetic recombinant proteins reveals H3K36me3-H3K9me3 bivalency at weakly transcribed genes
ChIP-seq
Homo sapiens
15
30/08/2016
-
ENA
98
-
L1-associated genomic regions are deleted in somatic cells of the healthy human brain – RNA-Sequencing
RNA-seq of coding RNA
Homo sapiens
9
28/08/2016
-
ENA
130
-
L1-associated genomic regions are deleted in somatic cells of the healthy human brain – Whole Genome Sequencing
DNA-seq
Homo sapiens
3
28/08/2016
-
ENA
145
-
L1-associated genomic regions are deleted in somatic cells of the healthy human brain – DNA Sequencing
DNA-seq
Homo sapiens
101
28/08/2016
-
ENA
237
-
Transcription profiling by array of heat shock response in a panel of lymphoblastoid cell lines established from 60 founder individuals in the Yoruba (YRI) HapMap population
transcription profiling by array
Homo sapiens
120
26/08/2016
-
260
-
MicroRNA profiling in Pten knockout mouse thymus cells
transcription profiling by array
Mus musculus
6
25/08/2016
-
179
-
Transcription profiling by array of liver tissues from mice with liver-specific knockout of Pit1 and wild-type littermates fed with either a high-fat diet or chow control diet
transcription profiling by array
Mus musculus
20
25/08/2016
-
181
In vitro expression in FGFR inhibitor sensitive and resistant cell lines
transcription profiling by array
Homo sapiens
64
25/08/2016
192
-
Molecular basis of beige adipocyte maintenance
RNA-seq of coding RNA
Mus musculus
19
25/08/2016
-
ENA
487
-
RNA-sequencing of a mouse-model of Spinal Muscular Atrophy reveals tissue-wide changes in splicing of U12-dependent introns
RNA-seq of coding RNA
Homo sapiens, Mus musculus
85
25/08/2016
-
ENA
462
-
Gene expression profiles of GPR15 knock out macrophages
transcription profiling by array
Mus musculus
12
25/08/2016
102
-
ZNF750 is a lineage-specific tumor suppressor in squamous cell carcinoma [UMSCC1]
RNA-seq of coding RNA
Homo sapiens
2
25/08/2016
-
130
-
ZNF750 is a lineage-specific tumor suppressor in squamous cell carcinoma [CaSki]
transcription profiling by array
Homo sapiens
4
25/08/2016
263
-
iPSC-Derived Cholangiocytes
RNA-seq of coding RNA
Homo sapiens
18
25/08/2016
-
-
90
-
Expression data from mouse liver
transcription profiling by array
Mus musculus
48
25/08/2016
100
-
Different genotypes of Trypanosoma cruzi produce distinctive placental environment genetic response in chronic experimental infection
transcription profiling by array
Mus musculus
12
25/08/2016
-
96
-
The effects of waterbourne phenanthrene exposure on teleost hypothalamic transcriptome
transcription profiling by array
Pimephales promelas
47
25/08/2016
86
-
Massively parallel interrogation of the effects of gene expression levels on cellular fitness
other
Saccharomyces cerevisiae
2
25/08/2016
-
92
-
CLIP-seq analysis of integrase-RNA interactions
RNA-seq of coding RNA
Human Immunodeficiency Virus 1
5
25/08/2016
-
100
-
Single cell RNA-sequencing of retinal bipolar cells
RNA-seq of coding RNA
Mus musculus
683
25/08/2016
-
116
-
Drop-Seq analysis of P17 FACS sorted retinal cells from the Tg(Chx10-EGFP/cre,-ALPP)2Clc or Vsx2-GFP transgenic line
RNA-seq of coding RNA
Mus musculus
6
25/08/2016
-
132
-
Smart-seq2 analysis of P17 FACS sorted retinal cells from the Kcng4-cre;stop-YFP X Thy1-stop-YFP Line#1 mice
RNA-seq of coding RNA
Mus musculus
384
25/08/2016
-
-
113
-
Bulk RNA-seq analysis of Type 5 retinal bipolar cells from the Htr3a-GFP line
RNA-seq of coding RNA
Mus musculus
2
25/08/2016
-
-
87
-
Complement protein C1q modulates macrophage molecular signaling and inflammatory responses during ingestion of atherogenic lipoproteins
RNA-seq of coding RNA
Homo sapiens
15
25/08/2016
-
-
86
-
Oviductal vs. ovarian epithelial transformation yields very different tumor phenotypes in Apc fl/fl;Pten fl/fl mice
transcription profiling by array
Mus musculus
15
25/08/2016
156
-
XRN2 Autoregulation and Control of Polycistronic Gene Expression in Caenorhabditis elegans
RNA-seq of coding RNA
Caenorhabditis elegans
4
25/08/2016
-
-
83
-
Isolation and next generation sequencing of epididymal extracellular vesicles reveals segmental patterns of miRNA expression and a potential mechanism for modification of the sperm epigenome
RNA-seq of non coding RNA
Mus musculus
9
25/08/2016
-
-
78
-
Direct GR binding sites potentiate clusters of TF binding across the human genome
other, ChIP-seq, RNA-seq of coding RNA
Homo sapiens
40
25/08/2016
-
126
-
Direct GR binding sites potentiate clusters of TF binding across the human genome [8]
ChIP-seq
Homo sapiens
4
25/08/2016
-
132
-
Direct GR binding sites potentiate clusters of TF binding across the human genome [7]
other
Homo sapiens
7
25/08/2016
-
97
-
Direct GR binding sites potentiate clusters of TF binding across the human genome [6]
ChIP-seq
Homo sapiens
3
25/08/2016
-
95
-
Direct GR binding sites potentiate clusters of TF binding across the human genome [5]
RNA-seq of coding RNA
Homo sapiens
6
25/08/2016
-
94
-
Direct GR binding sites potentiate clusters of TF binding across the human genome [4]
other
Homo sapiens
4
25/08/2016
-
91
-
Direct GR binding sites potentiate clusters of TF binding across the human genome [3]
RNA-seq of coding RNA
Homo sapiens
4
25/08/2016
-
94
-
Direct GR binding sites potentiate clusters of TF binding across the human genome [2]
other
Homo sapiens
6
25/08/2016
-
93
-
Direct GR binding sites potentiate clusters of TF binding across the human genome [1]
RNA-seq of coding RNA
Homo sapiens
6
25/08/2016
-
160
-
Dynamics of nucleosome positioning maturation following genomic replication
transcription profiling by array
Saccharomyces cerevisiae
16
25/08/2016
104
-
C4b-binding protein protects beta-cells from islet amyloid polypeptide induced cytotoxicity
transcription profiling by array
Rattus norvegicus
20
25/08/2016
93
-
Direct GR binding sites potentiate clusters of TF binding across the human genome
ChIP-seq
Homo sapiens
6
25/08/2016
-
94
-
Implication of Long noncoding RNAs in the endothelial cell response to hypoxia revealed by RNA-sequencing
RNA-seq of coding RNA
Homo sapiens
8
25/08/2016
-
-
115
-
Implication of Long noncoding RNAs in the endothelial cell response to hypoxia I
transcription profiling by array
Homo sapiens
4
25/08/2016
-
122
-
Implication of Long noncoding RNAs in the endothelial cell response to hypoxia II
transcription profiling by array
Homo sapiens
6
25/08/2016
-
106
-
Regulation of enhancer dynamics by MED12
ChIP-seq, other, transcription profiling by array
Homo sapiens, Mus musculus
48
25/08/2016
182
-
4C-seq analysis of the c-Kit locus
other
Mus musculus
6
25/08/2016
-
85
-
Med12 and p300 chips in HSPCs
ChIP-seq
Mus musculus
7
25/08/2016
-
114
-
Histone chromatin modifications in control and Med12-deficient mouse HSPCs
ChIP-seq
Mus musculus
26
25/08/2016
-
108
-
Genome-wide characterization of MED12 occupancy in human CD34+ cells
ChIP-seq
Homo sapiens
3
25/08/2016
-
87
-
Expression data from control and Med12-deficient hematopoietic stem cells and progenitors
transcription profiling by array
Mus musculus
6
25/08/2016
105
-
HER2 expression identifies dynamic functional states within circulating breast cancer cells
RNA-seq of coding RNA
Homo sapiens
74
25/08/2016
-
-
345
-
Dynamics of chromatin maturation after genome replication
ChIP-seq
Saccharomyces cerevisiae
93
25/08/2016
-
-
102
-
Changes in global gene expression in SIN1 knock-out murine epithelial fibroblasts
transcription profiling by array
Mus musculus
4
25/08/2016
124
-
ARTs versus developmental plasticity: blastocyst abnormalities after ICSI and embryo culture do not propagate into the offspring in mice
transcription profiling by array
Mus musculus
14
25/08/2016
-
140
-
Expression data in lung tissue from moderate COPD patients, healthy smokers and nonsmokers
transcription profiling by array
Homo sapiens
38
25/08/2016
511
-
Transcriptome profiling of DA neurons, human midbrain-like organoids and prenatal midbrain
RNA-seq of coding RNA
Homo sapiens
19
24/08/2016
-
ENA
258
-
Blockage of hemichannels alters gene expression in osteocytes in a high magneto-gravitational environment
transcription profiling by array
Mus musculus
24
24/08/2016
130
-
Carbon starvation along the maize leaf gradient
transcription profiling by array
Zea mays
45
24/08/2016
132
-
Exploration of the genes affecting the compound acting against emphysema development in a mouse model of elastase-induced emphysema
transcription profiling by array
Mus musculus
5
24/08/2016
114
-
Root adaptive responses to aluminum-toxicity revealed by RNA-Seq in two citrus species with contrasting aluminum tolerance
RNA-seq of coding RNA
Citrus maxima, Citrus sinensis
8
24/08/2016
-
-
85
-
Pericyte-fibroblast transition promotes tumor growth and metastasis
transcription profiling by array
Mus musculus
9
24/08/2016
135
-
Design, characterization, and use of a novel amyloid β-protein control for assembly, neurotoxicity, and gene expression studies
transcription profiling by array
Rattus norvegicus
23
24/08/2016
-
124
-
Enterococcus faecalis downregulates virulence genes of EHEC
RNA-seq of coding RNA
Escherichia coli O157:H7 str. EDL933
2
24/08/2016
-
-
88
-
Mouse Dux is myotoxic and shares partial functional homology with its human paralog DUX4
RNA-seq of coding RNA
Homo sapiens
9
24/08/2016
-
-
86
-
Transcriptome profile of murine bone marrow-derived macrophages treated with 15d-PGJ2 or 15d-PGJ2-PC
RNA-seq of coding RNA
Mus musculus
9
24/08/2016
-
-
88
-
The conserved role of the RSC chromatin remodeler in the establishment of nucleosome depleted regions
ChIP-seq
Schizosaccharomyces pombe
4
24/08/2016
ENA
105
-
Ileal expression data of mice fed with diet containing protein from various sources
transcription profiling by array
Mus musculus
33
24/08/2016
107
-
Transcriptomic analysis of inter- and intra-patient variation in human iPSC cardiomyocytes: Platform for precision medicine to predict drug toxicity
other, RNA-seq of coding RNA
Homo sapiens
35
24/08/2016
-
ENA
123
-
Gene expression profiling of TH-MYCN mouse neuroblastoma sphere cells and their parental primary tumor cells
transcription profiling by array
Mus musculus
6
24/08/2016
106
-
IL-15 activates mTOR and primes stress-activated gene-expression leading to prolonged anti-tumor capacity of NK cells
RNA-seq of coding RNA
Homo sapiens
40
24/08/2016
-
ENA
223
-
Methyl-CpG-Binding Protein MBD2 plays a critical role in maintenance and spread of DNA methylation of CpG islands and shores in cancer
transcription profiling by array, methylation profiling by array
Homo sapiens
12
24/08/2016
185
-
Methyl-CpG-Binding Protein MBD2 plays a critical role in maintenance and spread of DNA methylation of CpG islands and shores in cancer (methylation)
methylation profiling by array
Homo sapiens
6
24/08/2016
162
-
Methyl-CpG-Binding Protein MBD2 plays a critical role in maintenance and spread of DNA methylation of CpG islands and shores in cancer (expression)
transcription profiling by array
Homo sapiens
6
24/08/2016
191
-
Dormant and after-ripened seeds are distinguished by early transcriptional differences in the imbibed state
transcription profiling by array
Arabidopsis thaliana
54
24/08/2016
140
-
Transcriptome profiling of influenza virus-infected human bronchial epithelial cells
RNA-seq of coding RNA
Homo sapiens
6
24/08/2016
-
ENA
159
-
A developmental coordinate of the spectrum of pluripotency among mice, monkeys, and humans
RNA-seq of coding RNA
Macaca fascicularis, Mus musculus
492
24/08/2016
-
ENA
228
-
Regulatory complexity revealed by integrated cytological and RNA-seq analyses of meiotic substages in mouse spermatocytes
RNA-seq of coding RNA
Mus musculus
32
24/08/2016
-
-
123
-
Gene expression analysis of mouse lymphatic endothelial cells (LECs) from the subcapsular sinus (SS, afferent) and lymphatic sinus (LS, efferent)
transcription profiling by array
Mus musculus
14
24/08/2016
151
-
Transcriptome of alfalfa plants under animal grazing
RNA-seq of coding RNA
Medicago sativa
3
24/08/2016
-
ENA
90
-
Microarray analysis of chick embryonic tissues: gastrulation, neural tube/notochord and limb development
transcription profiling by array
Gallus gallus
34
23/08/2016
-
224
-
Expression data from kidneys of rats with and without cisplatin treatment
transcription profiling by array
Rattus norvegicus
57
23/08/2016
195
-
Functional genomics study of Aspergillus niger biofilms for the identification and characterization of genes of lignocellulolytic enzymes of industrial interest
transcription profiling by array
Aspergillus niger
32
23/08/2016
100
-
Human Renal Cancer Cells: Control vs STF-62247-treated cells
transcription profiling by array
Homo sapiens
6
23/08/2016
152
-
APOL1 renal-risk variants induce mitochondrial dysfunction
transcription profiling by array
Homo sapiens
60
23/08/2016
146
-
APOL1 renal-risk variants induce mitochondrial dysfunction (Affymetrix 2)
transcription profiling by array
Homo sapiens
30
23/08/2016
179
-
APOL1 renal-risk variants induce mitochondrial dysfunction (Illumina)
transcription profiling by array
Homo sapiens
24
23/08/2016
111
-
Comprehensive gene expression changes by the expression levels of Dicer protein
transcription profiling by array
Homo sapiens
3
23/08/2016
121
-
Human bone marrow-derived mesenchymal stem cells (Human BM-MSCs): Control (recombinant human LIGHT, rhLIGHT 0 ng/ml) vs rhLIGHT 200 ng/ml
transcription profiling by array
Homo sapiens
1
23/08/2016
97
-
Global expression profile difference of hiPSCs between hESCs and human Urine-Derived Cells
transcription profiling by array
Homo sapiens
6
23/08/2016
100
-
Study the function of miR-195 and miR-30d in prostate cancer cell (LNCap and DU145)
transcription profiling by array
Homo sapiens
18
23/08/2016
172
-
Proneurogenic ligands defined by modeling developing cortex growth factor communication networks
transcription profiling by array
Mus musculus
9
23/08/2016
101
-
Defining AP4- and MYC-regulated gene expression programs in germinal center B cells during cyclic re-entry
ChIP-seq, RNA-seq of coding RNA
Mus musculus
21
23/08/2016
ENA
102
-
Identification of TWIST1 transcriptional targets in the cranial mesoderm
ChIP-seq, transcription profiling by array
Canis lupus familiaris, Mus musculus
39
23/08/2016
-
167
-