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AccessionTitleTypeOrganismAssaysReleasedProcessedRawViewsAtlas
Transcription profiling by high throughput sequencing of CD8 single positive thymocytes from F5 Rag1KO TCR transgenic mice stimulated with tumor necrosis factor
RNA-seq of coding RNA
Mus musculus
11
05/07/2017
ENA
94
-
Gene expression of IKK1/2 deficient thymocytes
RNA-seq of coding RNA
Mus musculus
7
05/07/2017
ENA
92
-
Acquired TET2 mutation-linked clonal hematopoiesis in FPD/AML patient led to the development of pre-leukemic clone resulting independently in T2-ALL and AML-M0
DNA-seq
Homo sapiens
3
05/07/2017
-
ENA
149
-
Transcription profiling by array of Bacillus amyloliquefaciens FZB42 wildtype and sigD-mutants grown in media supplemented with soil extract or soil extract plus maize root exudates
transcription profiling by array
Bacillus amyloliquefaciens
9
05/07/2017
97
-
Transcription profiling by array of hepatocellular carcinoma cell lines following treatment with STAT3 shRNA and IL-6, IL-27 or IFN-gamma
transcription profiling by array
Homo sapiens
48
05/07/2017
-
245
-
Transcription profiling by array of a human embryonic kidney cell line (HEK-293) expressing mutant or wild type KIT following treatment with stem cell factor
transcription profiling by array
Homo sapiens
18
05/07/2017
-
96
-
microRNA profiling by array of human Autosomal Dominant Polycystic Kidney Disease kidney epithelial cell lines
microRNA profiling by array
Homo sapiens
6
05/07/2017
-
119
-
Gene expression profiling in human ADPKD cell lines
transcription profiling by array
Homo sapiens
6
05/07/2017
-
108
-
Transcriptome analysis of Arabidopsis expressing the transcription factor INDEHISCENT under the control of the 35S promoter after treatment with auxin
transcription profiling by array
Arabidopsis thaliana
12
05/07/2017
115
-
Transcriptome profiling after CBX7 knockdown in LNCaP cells
transcription profiling by array
Homo sapiens
12
05/07/2017
-
149
-
Long non-coding RNA expression profiling of human T cells in hepatocellular carcinoma
transcription profiling by array
Homo sapiens
9
05/07/2017
-
156
-
Transcriptome analysis in the Antarctic bacterium Pseudomonas extremaustralis at low temperatures
RNA-seq of coding RNA
Pseudomonas extremaustralis 14-3 substr. 14-3b
4
05/07/2017
-
ENA
73
-
Differences of gut mucosa gene expression between septic very low birth weight infants and their non-septic twins
transcription profiling by array
Homo sapiens
10
05/07/2017
-
131
-
Transcription profiling by array of E. faecalis V583 LexA- and wild type to investigate constitutive SOS response
transcription profiling by array
Enterococcus faecalis
2
05/07/2017
68
-
Transcription profiling of human breast cancer and scarcoma tissue and adjacent tissue to investigate alterantive splicing
transcription profiling by array
Homo sapiens
40
05/07/2017
288
-
Transcriptional differences between the peripheral and the transcription zone of the prostate
RNA-seq of coding RNA
Homo sapiens
18
04/07/2017
-
ENA
235
-
RNA-seq analysis of 2 cell line models of lung disease (A549 and BEAS-2B) and primary bronchial epithelial cells in Project 3 of Open Targets 020 - Epigenomes of Cell Lines
RNA-seq of coding RNA
Homo sapiens
7
04/07/2017
-
ENA
531
Transcription profiling by array of human extrahepatic cholangiocyte organoids, freshly isolated common bile duct cholangiocytes and embryonic stem cells
transcription profiling by array
Homo sapiens
15
04/07/2017
162
-
Analysis of transcriptomes from 21 tissues, 13 melanoma samples and 7 breast cancer cell lines, enriched for transcripts from haploblocks with intronic and intergenic GWAS SNPs
RNA-seq of coding RNA
Homo sapiens
41
04/07/2017
-
ENA
596
-
Transcription profiling by array of the differences between matched male and female breast cancer
transcription profiling by array
Homo sapiens
25
04/07/2017
-
224
-
Sphingobium Nickel resistance analysis by RNA-seq approach
RNA-seq of coding RNA
Sphingobium sp. ba1
6
03/07/2017
ENA
69
-
Gene expression between dry and imbibed seeds in vitamin C defective (vtc) mutants and wild-type Arabidopsis thaliana
RNA-seq of coding RNA
Arabidopsis thaliana
18
03/07/2017
ENA
80
-
Time of day determines Arabidopsis transcriptome and growth dynamics under mild drought
RNA-seq of coding RNA
Arabidopsis thaliana
21
03/07/2017
ENA
104
-
Transcription profiling by array of South Australian bread wheat under salt stress
transcription profiling by array
Triticum aestivum
84
02/07/2017
-
199
-
Transcription profiling by array of human hematopoietic stem cell isolated from multiple sclerosis patients and healthy controls
transcription profiling by array
Homo sapiens
8
02/07/2017
-
131
-
RNA-seq of Japonica rice with overexpression or knockdown of OsMPH1 gene, which is involved in regulation of plant height --- a major trait affecting yield potential
RNA-seq of coding RNA
Oryza sativa Japonica Group
9
01/07/2017
-
ENA
76
-
RNA-seq of Brachypodium distachyon culms from control and BdBAHD01 RNAi plants
RNA-seq of coding RNA
Brachypodium distachyon
12
01/07/2017
-
ENA
75
-
RNA-seq of Setaria viridis culms from control and SvBAHD01 RNAi plants
RNA-seq of coding RNA
Setaria viridis
9
01/07/2017
-
ENA
73
-
Gene expression analysis of lung cancer samples and healthy controls
transcription profiling by array
Homo sapiens
40
01/07/2017
-
510
-
Transcriptome profiling of human anaplastic meningioma IOMM-Lee cells following silencing of HuR (Human antigen R) gene expression by siRNA
transcription profiling by array
Homo sapiens
12
01/07/2017
-
63
-
Small RNA and total RNA sequencing of C. elegans with mutations in the hrde-1 and emb-4 genes
RNA-seq of non coding RNA
Caenorhabditis elegans
40
01/07/2017
-
ENA
115
-
Transcription profiling by high throughput sequencing of murine small intestinal epithelial cells stimulated with interleukin-28A
RNA-seq of coding RNA
Mus musculus
8
01/07/2017
-
ENA
146
-
Transcription profiling by array of human osteosarcoma cell line U2OS treated with ZM447439 (an aurora kinase inhibitor) or SB202190 (a p38 inhibitor)
transcription profiling by array
Homo_sapiens
4
01/07/2017
132
-
Time-course of bone marrow macrophages infected with Listeria monocytogenes in the presence or absence of IFNgamma
transcription profiling by array
Mus musculus
40
30/06/2017
-
129
-
Comparative microarrays of Actinoplanes sp. SE50/110 ΔacrA with the Actinoplanes sp. SE50/110 wildtype
transcription profiling by array
Actinoplanes sp. SE50/110
4
30/06/2017
-
66
-
RNAseq analysis of CD4 and CD8 T cells in response to vaccinia virus infection
RNA-seq of coding RNA
Mus musculus
12
30/06/2017
ENA
110
-
Transcriptional profiling of human breast tumor samples before and after treatment with chemotherapy with and without bevacizumab
transcription profiling by array
Homo sapiens
358
30/06/2017
462
-
Transcription profiling of human multiple myeloma cells after knockdown of EphA3
transcription profiling by array
Homo sapiens
4
30/06/2017
437
-
Transcription profiling by array of MCF7 cell lines silenced with TRAP1 small interfering RNA compared with scrambled RNA control
transcription profiling by array
Homo sapiens
6
30/06/2017
148
-
Expression profile of microRNAs in human follicular lymphoma (FL), reactive lymph nodes (rLN) and pure T cells
microRNA profiling by array
Homo sapiens
42
29/06/2017
-
205
-
ChIP-Seq of Gabpa in male C57Bl/6 mice liver
ChIP-seq
Mus musculus
5
29/06/2017
-
ENA
88
-
Histone H3K9me3 ChIP-seq of young adult C. elegans wildtype, and mutants emb-4 (qm31) and hrde-1 (tm1200)
ChIP-seq
Caenorhabditis elegans
20
29/06/2017
-
ENA
75
-
RNA-seq of wild-type Salmonella Typhimurium SL1344 and its AcrB D408A mutant
RNA-seq of coding RNA
Salmonella enterica subsp. enterica serovar Typhimurium str. SL1344
6
29/06/2017
ENA
75
-
Analysis of post-transcriptional RNA modifications in Caenorhabditis elegans under stress
RNA-seq of non coding RNA
Caenorhabditis elegans
9
29/06/2017
-
ENA
72
-
Acquired TET2 mutation-linked clonal hematopoiesis in FPD/AML patient led to the development of pre-leukemic clone resulting independently in T2-ALL and AML-M0
comparative genomic hybridization by array
Homo sapiens
2
29/06/2017
-
119
-
Transcriptome profiling of glioblastoma tissues and peritumoral regions by Serial Analysis of Gene Expression
transcription profiling by SAGE
Homo sapiens
27
29/06/2017
-
ENA
204
-
Finding new Chimeric RNAs in RNA-seq data, a test study in Acute Myeloid Leukemia patient cells
RNA-seq of coding RNA
Homo sapiens
3
28/06/2017
-
ENA
244
-
Transcription profiling by array of left ventricular papillary muscles from rats with diabetic cardiomyopathy and healthy controls treated with atorvastatin or vehicle control for 15 days
transcription profiling by array
Rattus norvegicus
12
27/06/2017
-
83
-
Transcription changes at sub-optimal root temperature in different grafting combinations of tomato rootstocks and scions
transcription profiling by array
Solanum habrochaites, Solanum lycopersicum
24
27/06/2017
-
75
-
Methylome profiling of human glioblastoma using Illumina 450K microarrays for the GlioTeX panel
methylation profiling by array
Homo sapiens
10
24/06/2017
-
194
-
Transcription profiling by array of mouse primary myoblasts constitutively expressing Hippo pathway downstream effectors Yap or Taz against empty vector controls
transcription profiling by array
Mus musculus
18
20/06/2017
131
-
Transcription profiling by array of Bacillus amyloliquefaciens FZB42 wildtype and sigD- mutants grown in media supplemented with soil extract
transcription profiling by array
Bacillus amyloliquefaciens
6
20/06/2017
87
-
Microarray analysis of abiotic stress responses in Arabidopsis thaliana rosette leaf tissue of Col-0 wild type plants and double/triple knockout mutants of aquaporins (pip2;1 pip2;2 and pip2;1 pip2;2 pip2;4)
transcription profiling by array
Arabidopsis thaliana
135
20/06/2017
256
-
Transcriptional profiling of the developmental gene whiH deletion mutant of Streptomyces venezuelae ATCC 10712 at 7 time points from 8 to 20 hours of growth
transcription profiling by array
Streptomyces venezuelae
42
19/06/2017
128
-
RNA-seq of Hutchinson-Gilford progeria syndrome cells treated with proteasome inhibitor MG132
RNA-seq of coding RNA
Homo sapiens
2
18/06/2017
-
ENA
168
-
AtPRMT5 regulates shoot regeneration through modulating multiple genes expression analyzed by RNA-seq
RNA-seq of coding RNA
Arabidopsis thaliana
6
18/06/2017
ENA
98
-
Genes induced by HERV-K virus retroviral envelop
transcription profiling by array
Homo sapiens
8
17/06/2017
-
102
-
Expression array of RKO colorectal cancer cells resistant to irinotecan (CPT-11)
transcription profiling by array
Homo sapiens
3
17/06/2017
-
173
-
Microarray transcription analysis of MDS/MPN leukocyte samples with and without EZH2 mutations (n = 12, each) and EZH2-downregulated F-36P, MOLM-13 and OCI-M2 cell lines, using 2 shRNAs targeting EZH2 and a non-targeting control shRNA, each
transcription profiling by array
Homo sapiens
60
15/06/2017
-
263
-
Dynamic regulation of VEGF-inducible genes by an ERK-ERG-p300 transcriptional network
transcription profiling by array
Homo sapiens
14
15/06/2017
-
95
-
ChIP-seq of ERG-bound regulatory elements in human and bovine vascular endothelial cells
ChIP-seq
Bos taurus, Homo sapiens
10
15/06/2017
-
ENA
150
-
Elevated growth temperature in procyclic form of Trypanosoma brucei
RNA-seq of coding RNA
Trypanosoma brucei
6
15/06/2017
-
ENA
58
-
RNA-seq of in vitro-generated murine T helper 17 cells
RNA-seq of coding RNA
Mus musculus
8
14/06/2017
ENA
111
-
Transcription profiling by array of 4T1 murine breast carcinoma cells and derived cell lines resistant to photodynamic therapy induced by novel porphyrin-based photosensitizers and temoporfin
transcription profiling by array
Mus musculus
13
14/06/2017
-
153
-
RNA-seq of ppp1r13l knockdown in neonatal mice cardiomyocytes and lipopolysaccharide stimulation kinetics transcriptome
RNA-seq of coding RNA
Mus musculus
12
13/06/2017
ENA
121
-
RNA-seq of BALB/cJ‐Ppp1r13lwa3/J (wa3) mouse hearts vs BALB/C wildtype mice aged 7 weeks and 12 weeks mice, as well as lipopolysaccharide treatment for 12-week-old mice
RNA-seq of coding RNA
Mus musculus
12
13/06/2017
-
ENA
95
-
Mutations in ACTRT1 and its transcribed non-coding elements lead to aberrant activation of the Hedgehog signaling pathway in inherited and sporadic basal cell carcinomas
transcription profiling by array
Homo sapiens
5
12/06/2017
-
199
-
p63 spatio-temporal control of cleft palate
transcription profiling by array
Mus musculus
8
12/06/2017
97
-
Transcription profiling by RNA-Seq mouse embryos
RNA-seq of coding RNA
Mus musculus
5
12/06/2017
ENA
148
-
Microarray analysis of palatal shelves from wild-type versus p63-null mouse embryos
transcription profiling by array
Mus musculus
6
12/06/2017
109
-
Transcription profiling by array of neonatal and children dermal fibroblasts isolated from cleft lip and adult dermal fibroblasts of breast and face
transcription profiling by array
Homo sapiens
93
11/06/2017
295
-
Transcription profiling by array of reproductive tissues from female Cynomolgus macaques ( Macaca fascicularis ) after systemic vaccination with a modified vaccinia virus Ankara (MVA)-HIVB
transcription profiling by array
Macaca fascicularis
18
09/06/2017
-
84
-
Transcriptome Analysis of Preinvasive and Invasive Early Squamous Carcinoma in Archival Laser Microdissected Samples
transcription profiling by array
Homo sapiens
60
09/06/2017
262
-
ChIP-seq data of Jun target genes and the control in zebrafish embryos
ChIP-seq
Danio rerio
8
08/06/2017
-
ENA
99
-
Global expression profiling time series of early human embryonic stem cell differentiation towards the mesoderm lineage
transcription profiling by array
Homo sapiens
33
08/06/2017
-
191
-
Transcriptome analysis of self-renewing human pancreatic progenitors derived from pluripotent stem cells
RNA-seq of coding RNA
Homo sapiens
9
06/06/2017
-
ENA
168
-
RNA-seq of Medicago truncatula A17 and the ethylene insensitive sickle mutant interacting with the fungal root pathogen, Rhizoctonia solani AG8
RNA-seq of coding RNA
Medicago truncatula
24
06/06/2017
ENA
109
-
EPO-regulated targets in E1, E2, and E3 erythroid progenitors
transcription profiling by array
Mus musculus
20
06/06/2017
113
-
miRNA expression profiles in fresh frozen and formalin-fixed paraffin embedded tonsillar tumors
transcription profiling by RT-PCR
Homo sapiens
30
06/06/2017
-
194
-
RNA-seq of high lipid producing Yarrowia lipolytica during nitrogen or carbon restriction (control strain)
RNA-seq of coding RNA
Yarrowia lipolytica
6
06/06/2017
-
ENA
107
-
Identifying crossover locations in Arabidopsis thaliana CMT3-11 (Col) x CMT3-7 (Ler) F2 and wild type Col x Ler F2 populations using genotyping by sequencing
genotyping by high throughput sequencing
Arabidopsis thaliana
555
05/06/2017
-
ENA
227
-
Nucleosome-depleted DNA transposons act as enhancers of meiotic recombination at Arabidopsis genes (RNA-seq)
RNA-seq of coding RNA
Arabidopsis thaliana
2
05/06/2017
-
ENA
86
-
Meiotic recombination initiation hotspots in Arabidopsis genes and transposons (H3K4m3 ChIP-seq)
ChIP-seq
Arabidopsis thaliana
9
05/06/2017
-
ENA
94
-
Meiotic recombination initiation hotspots in Arabidopsis genes and transposons (MNase-seq)
MNase-seq
Arabidopsis thaliana
3
05/06/2017
-
ENA
100
-
Meiotic recombination initiation hotspots in Arabidopsis genes and transposons (SPO11-1-oligonucleotides-seq)
DNA-seq
Arabidopsis thaliana
10
05/06/2017
-
ENA
120
-
Transcription profiling of dermal fibroblasts subjected to different fluid flow rates
transcription profiling by array
Homo sapiens
9
05/06/2017
-
110
-
Tissue and developmental atlas of Brachypodium distachyon
transcription profiling by array
Brachypodium distachyon
117
03/06/2017
-
133
-
Genome-wide gene expression analysis of MDA-MB-468 human breast cancer cells treated with PLA2G7 shRNA
transcription profiling by array
Homo sapiens
6
02/06/2017
-
187
-
Genome-wide gene expression analysis of MDA-MB-468 human breast cancer cells treated with PLA2G7 siRNA
transcription profiling by array
Homo sapiens
4
02/06/2017
-
147
-
Analysis of cardiovirus and infected host-cell gene expression through RNA sequencing and ribosome profiling
translation profiling, RNA-seq of coding RNA
Mus musculus
20
02/06/2017
-
ENA
135
-
Analysis of undifferentiated hiPSC and differentiation into intermediate mesoderm of cells from patients carrying a heterozygous mutation in the SAMD9 gene
transcription profiling by array
Homo sapiens
10
02/06/2017
-
100
-
Genome-wide analysis of somatic copy number alterations and chromosomal breakages in osteosarcoma
genotyping by array
Homo sapiens
160
02/06/2017
-
343
-
Transcription profiling by high throughput sequencing of pancreatic beta cells from wild type and Abcc8 knockout mice
RNA-seq of coding RNA
Mus musculus
8
02/06/2017
-
ENA
117
-
ATAC-seq on endocardial cells from E12.5 mouse hearts in Tbx20 knockouts and wild type counterparts
ATAC-seq
Mus musculus
4
02/06/2017
ENA
315
-
Deciphering the relationship between polycomb repression and stochastic gene expression from single-cell RNA-seq data
RNA-seq of coding RNA from single cells
Mus musculus
288
01/06/2017
-
ENA
221
-
Microarray analysis of leaves of Arabidopsis thaliana Col-0 plants exposed to volatile pinenes (treatment) or hexane (control)
transcription profiling by array
Arabidopsis thaliana
8
01/06/2017
103
-
Effect of elevated c-di-GMP in Sinorhizobium meliloti
transcription profiling by array
Sinorhizobium meliloti
4
01/06/2017
66
-
Fip1 iCLIP-seq in Hela cells without treatment or treated with negative control anti-sense oligos (ASO) or snoRD50a ASO to study how snoRD50a affects Fip1/RNA interaction in mRNA 3' processing
CLIP-seq
Homo sapiens
6
01/06/2017
-
ENA
72
-
RNA-biotin based pull down assay with polyA site (PAS) RNA substrates in Hela Nuclear Extract followed by RNA-seq to discover trans-acting RNA molecules involved in mRNA 3 processing
RIP-seq
Homo sapiens
4
01/06/2017
-
ENA
70
-
The epigenetic modifier Fam208a is required to maintain epiblast cell potency
transcription profiling by array
Mus musculus
12
01/06/2017
-
153
-
PBMCs from stage IV melanoma patients after vaccination with melanoma-targeted mature dendritic cells (mDCs)
transcription profiling by array
Homo sapiens
142
01/06/2017
262
-
Comparing effects of inhibition of activin receptor type IIB (ActRIIB), myostatin (GDF8) and/or activinA in mouse muscle
RNA-seq of coding RNA
Mus musculus
34
01/06/2017
ENA
128
-
Lipidomic and Metabolic Changes in the P4-type ATPase ATP10D deficient C57BL/6J Wild Type Mice upon Rescue of ATP10D Function
transcription profiling by array
Mus musculus
8
01/06/2017
-
70
-
Transcriptomic responses of three-spined stickleback (Gasterosteus aculeatus) from Aire and Siblyback populations to ethinyl-estradiol, copper and binary mixtures
transcription profiling by array
Gasterosteus aculeatus
120
01/06/2017
-
103
-
Transcriptomic profiles of the acetogen Clostridium ljungdahlii during lithoautotrophic growth with syngas or with H2 and CO2 compared to organoheterotrophic growth with fructose
transcription profiling by array
Clostridium ljungdahlii
12
01/06/2017
84
-
RNA-seq of RNA endocleavage sites after siRNA knock-down of XRN1 or SMG
RNA-seq of coding RNA
Homo sapiens
3
01/06/2017
-
ENA
89
-
RNA-seq of human foetal foreskin fibroblasts 2 (HFFF2) treated with 2ng/ml TGF-beta-1 to induce myofibroblast differentiation or 10Gy gamma irradiation to induce senescence
RNA-seq of coding RNA
Homo sapiens
9
01/06/2017
-
ENA
187
-
Gene Expression Patterns in Potato Roots Associated with Greater Plant Growth at Low Phosphate Concentrations in the Rhizosphere
transcription profiling by array
Solanum tuberosum
24
01/06/2017
-
72
-
MicroRNA analysis during serum starvation of primary Human Foreskin Fibroblast cells
microRNA profiling by array
Homo sapiens
4
01/06/2017
94
-
Transcription profiling by array of human MDA-MB231-luc2 cells treated with TGFbeta2 and ST247
transcription profiling by array
Homo_sapiens
4
01/06/2017
67
-
Transcription profiling of pancreata from Ptf1a-Cre;LSL-KrasG12D and Ptf1a-Cre;LSL-KrasG12D;RelAfl/fl mice
transcription profiling by array
Mus musculus
6
01/06/2017
105
-
Gene expression profiling of liver from C57BLKS/J and db/db 8 mice with an AAV harboring a control or GAbpa-specific miRNA under the LP1 promoter
transcription profiling by array
Mus musculus
24
31/05/2017
-
102
An oil containing EPA and DHA from transgenic Camelina sativa to replace marine fish oil in feeds for Atlantic salmon (Salmo salar L.)
transcription profiling by array
Salmo salar
36
31/05/2017
-
108
-
Assessing the reliability of spike-in normalization for analyses of single-cell RNA sequencing data
RNA-seq of coding RNA from single cells
Mus musculus
384
31/05/2017
ENA
174
-
Microarray examination of liver tissue from mice fed 58% saturated high fat diet to induce hepatic steatosis
transcription profiling by array
Mus musculus
12
31/05/2017
-
86
-
polyA site sequencing (PAS-seq) analysis of Hela cells treated with NC ASO or snoRD50a ASOs
RNA-seq of coding RNA
Homo sapiens
6
31/05/2017
-
ENA
78
-
RNA-seq of human cell line HeLa after depletion of a lncRNA with three different loss-of-function methods
RNA-seq of coding RNA
Homo sapiens
768
31/05/2017
ENA
210
-
Multiomics of tomato glandular trichomes reveals distinct features of central carbon metabolism supporting high productivity of specialized metabolites
transcription profiling by array
Solanum habrochaites, Solanum lycopersicum
12
31/05/2017
84
-
Cymodocea nodosa response to simulated CO2-driven ocean acidification
RNA-seq of coding RNA
Cymodocea nodosa
9
31/05/2017
ENA
62
-
Transcriptome profiling of contrasting rice genotypes in response to submergence during seed germination
RNA-seq of coding RNA
Oryza sativa
12
31/05/2017
-
ENA
164
-
Gene expression profiling in control, heat-shock, and recovery treatment in a RIL population of Caenorhabditis elegans L4 larvae
transcription profiling by array
Caenorhabditis elegans
84
30/05/2017
-
205
-
Transcriptome analysis of neuromuscular junction during degeneration and regeneration of axon terminal
RNA-seq of coding RNA
Mus musculus
12
30/05/2017
-
ENA
142
-
Transcription profiling by array of eight pairs of closely related strains using pair-wise two-colour microarray analysis
transcription profiling by array
Schizosaccharomyces pombe
8
30/05/2017
-
101
-
Transcriptomic response of tomato (Solanum lycopersicum) plants to ammonium toxicity at elevated CO2 conditions
transcription profiling by array
Solanum lycopersicum
12
29/05/2017
103
-
Transcriptional profiling by array of uropathogenic Escherichia coli (UPEC) strain grown in urine/Luria bertani medium culture in vitro as well as during three distinct phases of UPEC bladder infection
transcription profiling by array
Escherichia coli UTI89
15
28/05/2017
-
81
-
Microarray comparing maternal peripheral blood effector T cells to decidual effector T cells
transcription profiling by array
Homo sapiens
24
26/05/2017
-
148
-
Insights into the prevalence and underlying causes of clonal variation through transcriptomic analysis in Pichia pastoris
transcription profiling by array
Komagataella pastoris
30
26/05/2017
-
102
-
RNA-seq of E10.5 limb mesenchymal cells from mice with mutations in Mycn and mir17-92
RNA-seq of coding RNA
Mus musculus
12
24/05/2017
-
ENA
117
Physcomitrella patens Reute development
transcription profiling by array
Physcomitrella patens
10
24/05/2017
-
109
-
Maternal folate depletion during early development and high fat feeding from weaning elicit similar changes in gene expression, but not in DNA methylation, in adult offspring (DNA methylation data)
methylation profiling by array
Mus musculus
48
22/05/2017
102
-
Maternal folate depletion during early development and high fat feeding from weaning elicit similar changes in gene expression, but not in DNA methylation, in adult offspring (Gene expression data)
transcription profiling by array
Mus musculus
24
22/05/2017
72
-
Identification of ETO2-GLIS2 targets by ChIP-sequencing
ChIP-seq
Homo sapiens
27
22/05/2017
-
ENA
206
-
Temporal Transcriptional Profiling in response to cMYC and Her2/NEU Expression and Inactivation in In Vitro Cultured Primary Mammary Epithelial Cells of Adult Virgin Mice
transcription profiling by array
Mus musculus
9
22/05/2017
-
165
-
Temporal Transcriptional Profiling in response to cMYC and KrasG12D Expression and Inactivation in In Vitro Cultured Primary Mammary Epithelial Cells of Adult Virgin Mice
transcription profiling by array
Mus musculus
9
22/05/2017
-
184
-
RNAseq of Volvox carteri somatic cells and mature reproductive cells
RNA-seq of coding RNA
Volvox carteri
6
21/05/2017
-
ENA
112
-
Transcriptomes and differential gene expression at the Arabidopsis shoot meristem during flowering
RNA-seq of coding RNA
Arabidopsis thaliana
16
21/05/2017
-
ENA
421
Chromatin states in the Arabidopsis shoot apical meristem
ChIP-seq
Arabidopsis thaliana
24
21/05/2017
-
ENA
177
-
Chromatin states in the Arabidopsis seedlings
ChIP-seq
Arabidopsis thaliana
6
21/05/2017
-
ENA
289
-
RNA Seq of hematopoietic stem and progenitor cells
RNA-seq of coding RNA
Mus musculus
9
18/05/2017
ENA
237
-
The Global Molecular Landscape of dormant Hematopoietic Stem Cells
RNA-seq of coding RNA from single cells
Mus musculus
384
18/05/2017
ENA
261
-
Time-Resolved Proteomics Extends Ribosome Profiling-Based Measurements of Protein Synthesis Dynamics
other, RNA-seq of coding RNA
Homo sapiens
12
18/05/2017
-
-
182
-
Time series of gene expression profiles describing the temporal response to prolonged heat stress in C. elegans
transcription profiling by array
Caenorhabditis elegans
36
17/05/2017
149
-
Transcription profiling of Physcomitrella patens reproductive organs from wt and Ppglr1/2 knock out samples
transcription profiling by array
Physcomitrella patens
6
17/05/2017
127
-
YAP regulates cell mechanics by controlling focal adhesion assembly
ChIP-seq
Homo sapiens
5
17/05/2017
-
ENA
129
-
The Rhizoctonia solani transcriptome during interaction with the host plant Lactuca sativa
RNA-seq of coding RNA
Rhizoctonia solani
36
17/05/2017
-
ENA
131
-
INTS8 mutations cause severe neurodevelopmental syndrome
RNA-seq of coding RNA
Homo sapiens
4
17/05/2017
ENA
98
-
Analysis of paired primary and metastatic cell lines identifies common DNA methylation changes in melanoma metastasis
methylation profiling by high throughput sequencing
Homo sapiens
7
17/05/2017
-
165
-
Gene expression profiling in Abatacept treated Rheumatoid Arthritis patients according to response
transcription profiling by array
Homo sapiens
36
17/05/2017
256
-
Gene expression profiles of TIE2 expressing Monocytes (TEMs)
transcription profiling by array
Homo sapiens
6
17/05/2017
85
-
DNA microarray analysis using murine cerebellum at P6
transcription profiling by array
Mus musculus
2
16/05/2017
120
-
RNA-seq of a panel of non-melanoma skin cancer lesions
RNA-seq of coding RNA
Homo sapiens
29
16/05/2017
-
ENA
667
Microarray for transcript expression comparison of normal and Sox18 dominant negative dermal spheres
transcription profiling by array
Mus musculus
6
16/05/2017
-
121
-
Immune response eQTL study in primary human monocytes stimulated with multiple microbial ligands under multiple time points
transcription profiling by array
Homo sapiens
938
16/05/2017
-
421
-
RNA-SEQ assay for wild type and CRISPR induced endoglin knockout human pulmonary artery smooth muscle cells (PASMC)
RNA-seq of coding RNA
Homo sapiens
6
16/05/2017
-
ENA
85
-
Gata6 network regulates epidermal junctional zone cell fate
ChIP-seq, transcription profiling by array
Mus musculus
31
16/05/2017
134
-
Genome-wide maps of Gata6 in primary mouse keratinocytes
ChIP-seq
Mus musculus
4
16/05/2017
-
-
75
-
Gene expression signature of Gata6 positive epidermal cells
transcription profiling by array
Mus musculus
12
16/05/2017
81
-
Gene expression signature of the three major epidermal differentiation compartments: interfollicular epidermis (IFE), hair follicle (HF) and sebaceous gland (SG)
transcription profiling by array
Mus musculus
9
16/05/2017
95
-
Epidermal overexpression of ∆NLef1 leads to deregulation of epidermal stem cell fate
transcription profiling by array
Mus musculus
6
16/05/2017
79
-
Comparative gene expression profiling of serum-free and FBS treated adherent primary pancreatic TIC cultures
transcription profiling by array
Homo sapiens
16
16/05/2017
-
75
-
Epigenetic regulation and transcriptional repression by Tet1 in the early post-implantation mouse embryo: WG Bisulfite sequencing
Bisulfite-seq
Mus musculus
8
15/05/2017
ENA
139
-
Epigenetic regulation and transcriptional repression by Tet1 in the early post-implantation mouse embryo: ChIP seq
ChIP-seq
Mus musculus
12
15/05/2017
-
ENA
317
-
Transcription profiling of HEK293 cells expressing YAP1, RASSF1A or both to study the effect of RASSF1A on YAP signalling in the HIPPO pathway
transcription profiling by array
Homo sapiens
4
15/05/2017
-
121
-
Expression RNA-Seq data of matched cases of pre-treatment Fine-needle aspiration (FNA) and the respective post neo-adjuvant treatment operative sample of breast cancer patients
RNA-seq of coding RNA
Homo sapiens
14
15/05/2017
ENA
363
-
Epigenetic regulation and transcriptional repression by Tet1 in the early post-implantation mouse embryo: Methylation data
methylation profiling by high throughput sequencing
Mus musculus
44
15/05/2017
-
ENA
161
-
Lineage-specific functions of TET1 in the post-implantation mouse embryo.: RNA-Seq of in vitro converted primed epiblast-like cells
RNA-seq of coding RNA
Mus musculus
15
15/05/2017
-
ENA
194
-
Comparative genomic hybridization by array of 51 Diffuse Large B-cell Lymphomas against a common pool of reference DNA from healthy individuals to identify recurrent copy number events in this disease
comparative genomic hybridization by array
Homo sapiens
51
15/05/2017
272
-
Comparative genomic hybridization by array of 18 treatment-refractory Diffuse Large B-cell Lymphomas against a common reference pool of DNA from healthy individuals to identify copy number events that could predict the relapse
comparative genomic hybridization by array
Homo sapiens
18
15/05/2017
218
-
Comparative genomic hybridization by array of 38 Diffuse Large B-Cell lymphomas against matched blood samples to identify recurrent copy number events
comparative genomic hybridization by array
Homo sapiens
38
15/05/2017
244
-
RNA-seq transcriptional profiling in human primary fetal and adult CD34+ hematopoietic stem/progenitor cells (HSPCs) erythroid progenitor cells (ProEs)
RNA-seq of coding RNA
Homo sapiens
16
15/05/2017
-
ENA
117
-
Lineage-specific functions of TET1 in the post-implantation mouse embryo
RNA-seq of coding RNA
Mus musculus
23
15/05/2017
-
ENA
105
-
Adipocyte-derived Exosomal miRNAs from Subcutaneous Adipose Tissue: A Novel Mechanism for Obesity-Related Disease
transcription profiling by array
Homo sapiens
12
15/05/2017
80
-
Fgf18 regulates hair cycle
transcription profiling by array
Mus musculus
4
15/05/2017
74
-
FGF18 affects hair cycle
transcription profiling by array
Mus musculus
2
15/05/2017
66
-
Transcription profiling by RNA-seq of Arabidopsis treated with the Strobilurin kresoxim-methyl to study the effect on leaf growth
RNA-seq of coding RNA
Arabidopsis thaliana
6
13/05/2017
-
ENA
134
-
Genome-wide identification of bZIP29 target genes in Arabidopsis cell cultures
ChIP-seq
Arabidopsis thaliana
3
13/05/2017
ENA
228
-
Skeletal muscle gene expression in the wild type and the GAA knock-out mice, a model of Pompe disease
RNA-seq of coding RNA
Mus musculus
9
13/05/2017
-
-
70
-
Bacterial endosymbionts control host sexuality and reveal reproductive genes of early divergent fungi
RNA-seq of coding RNA
Rhizopus microsporus
12
13/05/2017
-
-
54
-
The male determining M-factor of the global disease vector Musca domestica is a paralog of the generic splice factor CWC22
RNA-seq of coding RNA
Musca domestica
4
12/05/2017
-
ENA
146
-
Expression Profiling of Term Placenta in Viviparous Mammals by RNA-Seq
RNA-seq of coding RNA
Ateles fusciceps, Bos taurus, Canis lupus familiaris, Dasypus novemcinctus, Loxodonta africana, Monodelphis domestica, Mus musculus, Pan paniscus
8
12/05/2017
ENA
84
-
Expression profiling in cellular miRNAs of human bone marrow stromal cells
other
Homo sapiens
6
12/05/2017
-
124
-
Expression profiling in exosomal miRNAs secreted from human bone marrow stromal cells
other
Homo sapiens
6
12/05/2017
-
121
-
The gene expression profiles of human bone marrow stromal cells
transcription profiling by array
Homo sapiens
6
12/05/2017
155
-
The role of PCNA ubiquitylation during unperturbed genome replication in S.pombe
other
Schizosaccharomyces pombe
14
12/05/2017
-
-
82
-
Cyflumetofen resistance in the two-spotted spider mite Tetranychus urticae
transcription profiling by array
Tetranychus urticae
4
12/05/2017
63
-
Rapid High-Resolution Functional Mapping of Yeast Genomes by Saturated Transposition
DNA-seq
Saccharomyces cerevisiae
7
11/05/2017
ENA
244
-
Influence of organic cultivation on potato transcriptome
transcription profiling by array
Solanum tuberosum
8
11/05/2017
154
-
Expression data from BIG LEAF
transcription profiling by array
Populus tremula x Populus alba
12
11/05/2017
125
-
Transcription profiling by array of chicken anterior wing buds treated with retinoic acid at stage HH20 and later harvested at stage HH24
transcription profiling by array
Gallus gallus
5
10/05/2017
151
-
Transcription profiling of DREB1A overexpressing vs wild type Arabidopsis plants
transcription profiling by array
Arabidopsis thaliana
4
10/05/2017
-
182
-
Gene expression in human basal, luminal, and stromal cell populations from benign prostatic hyperplasia tissues and comparisons with cultured basal cells
transcription profiling by array
Homo sapiens
11
09/05/2017
-
199
-
Transcriptome changes associated with relief of sly1-2 seed dormancy through after-ripening or overexpression of the gibberellin-receptor GID1b
transcription profiling by array
Arabidopsis thaliana
24
09/05/2017
217
-
Gene expression profiling of PANC1 and BXPC-3 pancreatic cells
transcription profiling by array
Homo sapiens
4
09/05/2017
275
-
In vitro experiment, aquaous extract (AE), Total particulate matter (TPM) and gas-vapor phase (GVP) on NHBE cells
transcription profiling by array
Homo sapiens
30
05/05/2017
253
-
Transcription profiling by array of acute megakaryoblastic leukemia fusion oncogene expressing human HEL and MO7E cells
transcription profiling by array
Homo sapiens
26
05/05/2017
290
-
Ageing liver RNAseq of C57BL/6 male mice in dietary restricted and an ad libitum diets
RNA-seq of coding RNA
Mus musculus
12
04/05/2017
-
ENA
231
-
RNA sequencing of tumor associated macrophages and T cells in clear cell renal cell carcinoma
RNA-seq of coding RNA
Homo sapiens
83
04/05/2017
ENA
1189
-
Lineage-dependent spatial and functional organisation of the mammalian enteric nervous system
RNA-seq of coding RNA from single cells
Mus musculus
120
04/05/2017
-
ENA
475
-
Gene expression changes at the onset of sexual reproduction in the marine planktonic diatom Pseudo-nitzschia multistriata
RNA-seq of coding RNA
Pseudo-nitzschia multistriata
16
04/05/2017
-
ENA
153
-
MeDIP assay using human myometrium of women with preterm labor of different phenotypes vs. normal term labor
methylation profiling by array
Homo sapiens
6
04/05/2017
-
155
-
MeDIP and hMeDIP assays using human placentas of obese and lean (healthy weight) pregnancies
methylation profiling by array
Homo sapiens
4
04/05/2017
-
138
-
Integrative and comparative genomics identifies the tyrosine kinase FES as a key melanoma tumor supppressor: WGS part 2
DNA-seq
Mus musculus
11
03/05/2017
-
ENA
197
-
The microRNA-205 is correlated to metastatic potential of 21T series: a breast cancer progression model
transcription profiling by array
Homo sapiens
10
03/05/2017
-
283
-
RNA-seq of the Ileo-Caecal Valve Lymph Node of Sheep with Paratuberculosis Compared to Uninfected Controls
RNA-seq of coding RNA
Ovis aries
16
03/05/2017
-
ENA
202
-
Marine diatoms sense and respond to microscale turbulence in non-limiting nutrient conditions
RNA-seq of coding RNA
Chaetoceros decipiens
8
03/05/2017
-
ENA
147
-
Transcriptome profiling for wild-type, single and double mutants for Nuclear Factor YA1 (nf-ya1) and hypernodulation phenotype (har1) mutants in roots of Lotus japonicus
transcription profiling by array
Lotus japonicus
18
03/05/2017
-
152
-
Integrative and comparative genomics identifies the tyrosine kinase FES as a key melanoma tumor supppressor: WGS
DNA-seq
Mus musculus
68
03/05/2017
-
ENA
236
-
Integrative and comparative genomics identifies the tyrosine kinase FES as a key melanoma tumor supppressor: WES
DNA-seq
Mus musculus
23
03/05/2017
-
ENA
228
-
Condensin plays a role in both interphase nuclei and premature chromosome condensation
RNA-seq of coding RNA
Gallus gallus
5
03/05/2017
-
176
-
NPM1 mutation-modulated microRNA-mRNA regulation in acute myeloid leukemia
transcription profiling by array
Homo sapiens
218
03/05/2017
348
-
NPM1 mutation-modulated microRNA−mRNA regulation in acute myeloid leukemia [miRNA]
transcription profiling by array
Homo sapiens
109
03/05/2017
244
-
NPM1 mutation-modulated microRNA−mRNA regulation in acute myeloid leukemia [mRNA]
transcription profiling by array
Homo sapiens
109
03/05/2017
-
238
-
Genome wide STAT3 RNAi expression profiling data from Thp,Th0 and Th17 cells
transcription profiling by array
Homo sapiens
108
03/05/2017
171
-
Genome-wide detection of STAT3 binding sites in human Th17 cells
ChIP-seq
Homo sapiens
2
03/05/2017
-
-
112
-
Small RNA profiles of three different mycovirus-infected Aspergillus fumigatus isolates, created using Illumina high definition adapters
RNA-seq of non coding RNA
Aspergillus fumigatus
3
03/05/2017
-
-
83
-
RNA-seq of mouse astrocytes in monoculture and co-cultured with rat neurons (both inactive and active)
RNA-seq of coding RNA
Mus musculus, Rattus norvegicus, mixed sample
43
02/05/2017
-
ENA
242
-
Microarray analyses of C. albicans sak1 deletion mutant in complex liquid medium (YPD)
transcription profiling by array
Candida albicans
6
02/05/2017
-
120
-
Tyrosine 842 in the activation loop is required for full transformation by the oncogenic mutant FLT3-ITD
transcription profiling by array
Mus musculus
6
02/05/2017
-
152
-
Transcription profiling by array of the effects of exogenous lipid on differentiated THP-1 cells
transcription profiling by array
Homo sapiens
12
02/05/2017
-
122
-
Intra-macrophage Expression data of Francisella tularensis novicida U112
transcription profiling by array
Francisella tularensis subsp. novicida U112
3
02/05/2017
67
-
Integrated analysis of MLL-AF9 AML patients and model leukemias highlights RET and other novel therapeutic targets (Leukemia Cell Bank)
RNA-seq of coding RNA
Homo sapiens
3
02/05/2017
ENA
131
-
Integrated analysis of MLL-AF9 AML patients and model leukemias highlights RET and other novel therapeutic targets [RNA-Seq_normal]
RNA-seq of coding RNA
Homo sapiens
4
02/05/2017
ENA
146
-
Integrated analysis of MLL-AF9 AML patients and model leukemias highlights RET and other novel therapeutic targets [RNA-Seq_AML]
RNA-seq of coding RNA
Homo sapiens
4
02/05/2017
ENA
158
-
Integrative epigenomic analysis in MLL-AF9 acute myeloid leukemia (AML) and B-acute lymphoblastic leukemia (B-ALL)
methylation profiling by high throughput sequencing
Homo sapiens
9
02/05/2017
ENA
147
-
BBr003: Characterization of bovine embryos cultured under conditions appropriate for sustaining human naïve pluripotency
transcription profiling by array
Bos taurus
4
02/05/2017
75
-
Small RNA profiles of mycovirus-free and mycovirus-infected Aspergillus fumigatus isolates, created using ScriptMiner adapters
RNA-seq of coding RNA, RNA-seq of non coding RNA
Aspergillus fumigatus
16
02/05/2017
-
-
68
-
Isocaloric intake of diets differing in macronutrient content (high protein or high fat) in adult rats indicate adverse effects as analysed by hepatic transcriptomics
transcription profiling by array
Rattus norvegicus
19
02/05/2017
105
-
A DNA methylation atlas of the human eye and its diseases
methylation profiling by array
Homo sapiens
273
02/05/2017
-
331
-
Hes1 is responsible for Notch signaling-mediated suppression of acute myeloid leukemia development
transcription profiling by array
Mus musculus
4
02/05/2017
147
-
DNA-seq of differentially induced promoter regions in E. coli UTI89 strain grown in either J82 bladder epithelial cells, urine, DMEM or LB medium
DNA-seq
Escherichia coli UTI89
4
01/05/2017
-
ENA
121
-
Differential transcriptomic analysis reveals hidden light stress response in Streptomyces lividans TK24
RNA-seq of coding RNA
Streptomyces lividans
2
01/05/2017
-
ENA
201
-
Microarray analysis of gene expression in Phytophthora capsici over-expressing an NMRA-like protein (PcNMRAL1, Phyca11_505845) during a time course infection assay of tomato (Solanum lycopersicum) leaves
transcription profiling by array
Phytophthora capsici
24
01/05/2017
-
113
-
Whole-exome sequencing (WES) of single glands from opposite side of two colorectal tumors and WES of colorectal cancer xenografts derived from single cell culture to study tumor growth dynamics
DNA-seq
Homo sapiens
21
01/05/2017
-
-
359
-
Microarray transcriptomic profiling of patients with sepsis due to faecal peritonitis and pneumonia to identify shared and distinct aspects of the transcriptomic response (validation cohort)
transcription profiling by array
Homo sapiens
108
01/05/2017
289
-
Microarray transcriptomic profiling of patients with sepsis due to faecal peritonitis and pneumonia to identify shared and distinct aspects of the transcriptomic response (discovery cohort)
transcription profiling by array
Homo sapiens
237
01/05/2017
267
-
Abiotic stress-response reprogramming events underlie successful initiation of apomixis
RNA-seq of coding RNA
Boechera Stricta, Boechera gunnisoniana
2
01/05/2017
-
ENA
108
-
Transcription profiling by array of CD45+ lymphocytes from a xenograft model of induction therapy and relapse in pediatric acute lymphoblastic leukemia
transcription profiling by array
Homo sapiens
48
01/05/2017
-
221
-
iCLIP of TDP-43
CLIP-seq
Homo sapiens
2
01/05/2017
-
ENA
155
-
3'-end targeted sequencing of 6 control and 6 TDP-43 KD samples in HEK293
RNA-seq of coding RNA
Homo sapiens
12
01/05/2017
-
ENA
163
-
EphA3 silencing in Multiple Myeloma Endothelial Cells
transcription profiling by array
Homo sapiens
4
01/05/2017
176
-
Expression data of three sets of cells: (1) Schwann cells and macrophages from 1m-old WT DRG, (2) Schwann cells (Nf1-/-) and macrophages (Nf1+/+) from 1m-old neurofibroma, (3) Schwann cells (Nf1-/-) and macrophages (Nf1+/+) from 7m-old neurofibroma
transcription profiling by array
Mus musculus
23
01/05/2017
98
-
Postnatal monocyte maturation requires age-dependent initiation of regulatory gene programs when losing birth-associated stress tolerance
transcription profiling by array
Homo sapiens
12
01/05/2017
107
-
Gene transcription analysis of Daphnia magna multigenerations exposed to carbendazim
transcription profiling by array
Daphnia magna
12
01/05/2017
65
-
Viral Profiles in Sjogren's Syndrome
transcription profiling by array
Viruses
29
01/05/2017
103
-
Chromatin interactions involving super-enhancers associate with specific expression patterns of target genes
other
Homo sapiens
6
01/05/2017
ENA
118
-
RNA-Seq data for KRAS wild-type(WT) and two mutant forms G12V and Q61H over-expressed samples with green fluorescent protein control samples using human mammary epithelial cells
RNA-seq of coding RNA
Homo sapiens
36
01/05/2017
-
ENA
84
-
Acetyl-CoA metabolism by ACSS2 regulates neuronal histone acetylation and long-term memory
ChIP-seq, RNA-seq of coding RNA
Mus musculus
46
01/05/2017
-
74
-
Acetyl-CoA metabolism by ACSS2 regulates neuronal histone acetylation and long-term memory [RNA-seq]
RNA-seq of coding RNA
Mus musculus
16
01/05/2017
ENA
63
-
Acetyl-CoA metabolism by ACSS2 regulates neuronal histone acetylation and long-term memory [ChIP-seq]
ChIP-seq
Mus musculus
14
01/05/2017
-
ENA
54
-
Genome-wide maps of five major transcription factors in epiblast stem cells
ChIP-seq
Mus musculus
11
01/05/2017
ENA
67
-
degradome sequence data
RNA-seq of coding RNA
Glycine max
4
01/05/2017
ENA
83
-
Human TNBC Cells 72h Treatment with 45nM OTSSP167 MELK Inhibitor vs. DMSO Control (SUM159)
transcription profiling by array
Homo sapiens
2
01/05/2017
238
-
Human TNBC Cells 72h Treatment with 4.5nM OTSSP167 MELK Inhibitor vs. DMSO Control (SUM159)
transcription profiling by array
Homo sapiens
2
01/05/2017
157
-
Genome-wide effects of the maternal embryonic leucine zipper kinase (MELK) in triple-negative breast cancer cells indicate context-dependent effects and p53 as a key determinant
transcription profiling by array
Homo sapiens
10
01/05/2017
218
-
Human TNBC Cells 72h Treatment with 45nM OTSSP167 MELK Inhibitor vs. DMSO Control
transcription profiling by array
Homo sapiens
2
01/05/2017
146
-
Human TNBC Cells 72h Treatment with 4.5nM OTSSP167 MELK Inhibitor vs. DMSO Control
transcription profiling by array
Homo sapiens
2
01/05/2017
148
-
Human TNBC Cells 48h Treatment with OTSSP167 MELK Inhibitor vs. DMSO Control
transcription profiling by array
Homo sapiens
2
01/05/2017
149
-
Genome-wide maps of the total and lysine methylated enriched pools of peroxisome proliferating activated receptor gamma (pparg) co-activator 1 alpha (ppargc1a) in Hepa 1-6 cells
ChIP-seq
Mus musculus
3
01/05/2017
-
-
106
-
Transcriptome Analysis of Immunity- and Reproduction-related Differential Gene Expression in Parasitized Locusta migratoria
RNA-seq of coding RNA
Locusta migratoria
12
01/05/2017
-
62
-
Comparative expression of bone metastasis clones and its parental cells on Chinese lung adenocarcinoma cell line SPC-A-1 and human larger cell lung cancer cell line NCI-H460 by cDNA array
transcription profiling by array
Homo sapiens
3
01/05/2017
155
-
Genome-wide RNA-seq analysis during carbon catabolite repression in Trichoderma reesei reveals a multilevel control of cellulase production and action
RNA-seq of coding RNA
Trichoderma reesei
6
01/05/2017
-
-
60
-
Regulatory and evolutionary footprints of messenger RNA secondary structure in primate transcriptomes
other, RNA-seq of coding RNA, RNA-seq of non coding RNA
Homo sapiens, Macaca fascicularis, Macaca mulatta
22
01/05/2017
-
-
67
-
Cholesterol regulates DAF-16 nuclear localization and fasting-induced longevity in C. elegans
transcription profiling by array
Caenorhabditis elegans
8
01/05/2017
76
-
Histone H3 Ser10 phosphorylation in hpr1-101
ChIP-chip by tiling array
Saccharomyces cerevisiae
2
01/05/2017
-
103
-
Microarray analysis of mouse whole genome using self-amplifying messenger (SAM) RNA delivered with different formulations compared to controls
transcription profiling by array
Mus musculus
15
30/04/2017
-
98
RNA-Seq of ALDH positive, ALDH negative and unsorted cells from patient-derived 3D in-vitro models of colon cancer
RNA-seq of coding RNA
Homo sapiens
29
30/04/2017
-
ENA
248
-
Transcript analysis of Arabidopsis wild type and S-nitrosoglutathione reductase knock-out line (Wassilewskija)
transcription profiling by array
Arabidopsis thaliana
6
30/04/2017
-
90
-
Longitudinal and Diurnal Experiments of M. hapla and M. truncatula
RNA-seq of coding RNA
Medicago truncatula, Meloidogyne hapla, root metagenome
134
30/04/2017
-
ENA
201
-
miRNA profiling of the MV4-11 cell line treated with trabectidin or azacitidin
microRNA profiling by array
Homo sapiens
29
30/04/2017
197
-
GNS577_transcriptome
transcription profiling by array
Sinorhizobium meliloti
3
30/04/2017
85
-
Methylation profiling in predict recurrence hepatocellular carcinoma
methylation profiling by array
Homo sapiens
66
30/04/2017
-
213
-
Systematic identification of changes in the yeast protein interaction network in response to environmental, chemical, and genetic perturbation [transcriptome data]
transcription profiling by array
Saccharomyces cerevisiae
10
30/04/2017
132
-
Analysis of gene expression from fbn5-1 T-DNA insertion mutant of Arabidopsis
transcription profiling by array
Arabidopsis thaliana
8
30/04/2017
62
-
Expression data from prostate cancer cell lines
transcription profiling by array
Homo sapiens
4
30/04/2017
217
-
Expression data of sound vibration-treated Arabidopsis thaliana during Botrytis cinerea infection
transcription profiling by array
Arabidopsis thaliana
18
29/04/2017
-
183
-
Gene expression profile of melanoma cell lines after overexpression or knockdown of KPC1
RNA-seq of coding RNA
Homo sapiens
4
29/04/2017
-
-
120
-
Expression data in Arabidopsis Col-0 with acetic acid treatment and subsequent drought treatment
transcription profiling by array
Arabidopsis thaliana
27
29/04/2017
80
-
Expression data in Arabidopsis hda6 mutant axe1-5 and its parental line DR5 under drought and control conditions
transcription profiling by array
Arabidopsis thaliana
30
29/04/2017
103
-
SNP array in severe early-onset obesity
genotyping by array
Homo sapiens
157
28/04/2017
-
156
-
Primary human bone marrow-derived mesenchymal stem cells (MSCs) treated with TNFa ligand
transcription profiling by array
Homo sapiens
14
28/04/2017
-
96
-
Primary human bone marrow-derived mesenchymal stem cells (MSCs) treated with TGFb1 ligand
transcription profiling by array
Homo sapiens
14
28/04/2017
-
145
-
Molecular phenotyping of multiple mouse strains under metabolic challenge uncovers Elovl2 as a novel regulator of glucose-induced insulin secretion
RNA-seq of coding RNA
Mus musculus
338
28/04/2017
-
ENA
170
-
Transcriptional profiling of Regulatory T-cells isolated from adult skin and skin draining lymph nodes (SDLNs)
RNA-seq of coding RNA
Mus musculus
7
28/04/2017
-
ENA
53
-
Transcriptional profiling of hair follicle stem cells in the presence and absence of Regulatory T-cells
RNA-seq of coding RNA
Mus musculus
4
28/04/2017
-
ENA
53
-
Time-course expression data from HEK293∆RAF1:ER cells stimulated with 4OHT, U0126, CYHX, ActD, EGF, FGF, or IGF
transcription profiling by array
Homo sapiens
41
28/04/2017
108
-
C/EBPalpha regulated microRNA expression profiling in inducible K562-C/EBPalpha-ER cells
RNA-seq of non coding RNA
Homo sapiens
6
28/04/2017
ENA
102
-
Differentiation of human embryonic stem cells towards hepatocytes
RNA-seq of coding RNA
Homo sapiens
10
28/04/2017
-
-
109
-
G-CSF plus AMD3100 mobilization in adult patients with beta-thalassemia results in effective mobilization of CD34+ cells with primitive signatures
transcription profiling by array
Homo sapiens
4
28/04/2017
88
-
Mutant p53R273H regulated microRNA profiling in presence and absence of DNA damage in H1299 cells
RNA-seq of non coding RNA
Homo sapiens
8
28/04/2017
-
-
156
-
Transcription profiling of human coronary artery endothelial cells exposed to x-ray radiation - 1 day, 7 days, 14 days post-irradiation
transcription profiling by array
Homo sapiens
45
27/04/2017
-
170
-
Gene expression profiling after vaccination with the RTS,S candidate malaria vaccine in a controlled human malaria infection study
transcription profiling by array
Homo sapiens
302
27/04/2017
383
-
mRNA profiling in aortic stenosis
transcription profiling by array
Homo sapiens
20
27/04/2017
-
123
-
MicroRNA profiling in aortic stenosis
microRNA profiling by array
Homo sapiens
38
27/04/2017
-
129
-
Gene expression profile in IM-0223 cells transfected with KPC1 or control vector using RNA-seq
RNA-seq of coding RNA
Homo sapiens
4
27/04/2017
-
-
91
-
RNA-Seq of pancreatic islets from beta cell-specific Pax6 knockout mice
RNA-seq of coding RNA
Mus musculus
9
26/04/2017
-
ENA
134
A MILI-independent piRNA biogenesis pathway empowers partial germline reprogramming
Bisulfite-seq
Mus musculus
9
25/04/2017
-
ENA
136
-
The nuclear receptor ERbeta engages AGO2 in regulation of gene transcription, RNA splicing and RISC loading. Part 4
RNA-seq of coding RNA
Homo sapiens
9
25/04/2017
-
ENA
154
The nuclear receptor ERbeta engages AGO2 in regulation of gene transcription, RNA splicing and RISC loading. Part 5
ChIP-seq
Homo sapiens
18
25/04/2017
-
ENA
172
-
RNA-seq of LGR5(+) and LGR5(-) cells isolated from human colon adenoma organoids and targeted DNA-seq of a colorectal biobank
DNA-seq, RNA-seq of coding RNA
Homo sapiens
71
24/04/2017
-
ENA
8
-
Whole genome-wide expression profiles of hemp (Cannabis sativa L.) in response to drought stress
RNA-seq of coding RNA
Cannabis sativa
4
22/04/2017
-
114
-
Transcription profiling by array of the hippocampi of aged NGS mice treated with human plasma
transcription profiling by array
Mus musculus
28
21/04/2017
185
-
Examination of the role of BMP signaling in patterning of human pluripotent stem cell derived mid/hindgut spheroids and maintenance of this patterning in organoids transplanted under mouse kidney capsules
RNA-seq of coding RNA
Homo sapiens
24
20/04/2017
-
ENA
215
-
microArray analysis of miRNA expression of human esophageal cell samples and breast cell samples for comparison with multiplexed ligation-based miRNA detection assay
microRNA profiling by array
Homo sapiens
8
20/04/2017
-
258
-
DOT1L inhibition with EPZ-5676 in human articular chondrocytes from 5 non-OA hip fracture patients
transcription profiling by array
Homo sapiens
10
20/04/2017
173
-
Gene expression in neonatal NKT cells and lymphoma samples from mice with high E protein levels [Microarray Expression]
transcription profiling by array, unknown experiment type
Mus musculus
6
20/04/2017
149
-
The Sinorhizobium meliloti NfeR1-dependent transcriptome probed with Sm14kOLI microarrays
transcription profiling by array
Sinorhizobium meliloti
8
19/04/2017
-
139
-
Genome wide mapping of long range contacts unveils DNA Double Strand Breaks clustering at damaged active genes
DNA-seq
Homo sapiens
7
19/04/2017
-
ENA
219
-
Expression data from mouse brain tissue
transcription profiling by array
Mus musculus
28
19/04/2017
71
-
Gene expression profile of patients with moderate and severe chronic spontaneous urticaria
transcription profiling by array
Homo sapiens
61
19/04/2017
108
-
Gene expression profile of patients with moderate and severe chronic spontaneous urticaria [blood]
transcription profiling by array
Homo sapiens
30
19/04/2017
125
-
Gene expression profile of patients with moderate and severe chronic spontaneous urticaria [tissue]
transcription profiling by array
Homo sapiens
31
19/04/2017
108
-
Maize endosperm vp1 mutant response to water deficit
transcription profiling by array
Zea mays
12
19/04/2017
-
99
-
Comparison of global gene expression profiles of microdissected human foetal Leydig cells with their normal and hyperplastic adult equivalents
transcription profiling by array
Homo sapiens
12
18/04/2017
-
239
-
Expression data from young and senescent HCAECs treated with proton pump inhibitors (omeprazole and lansoprazole)
transcription profiling by array
Homo sapiens
18
18/04/2017
109
-
Comparative study of host response to chytridiomycosis in susceptible and resistant toad species
transcription profiling by array
Anaxyrus boreas, Rhinella marina
71
18/04/2017
109
-
Lamin A/C Is Required For ChAT-Dependent Neuroblastoma Differentiation: a microarray gene expression study
transcription profiling by array
Mus musculus
8
18/04/2017
85
-
Targeting MDM4/MDM2 binding interface for reactivation of p53 in cancer therapy
transcription profiling by array
Homo sapiens
24
18/04/2017
240
-
ChIP-seq of H1299 cells stably transfected with empty vector or the p53 mutant R273H
ChIP-seq
Homo sapiens
8
16/04/2017
-
ENA
290
-
RNA-seq of H1299 cells stably transfected with empty vector or the p53 mutant R273H
RNA-seq of coding RNA
Homo sapiens
4
16/04/2017
-
ENA
267
-
Affymetrix whole transcriptome gene expression analysis of ER-stressed Jurkat cells
transcription profiling by array
Homo sapiens
4
15/04/2017
192
-
RNA-seq of Streptococcus anginosus in a mono- and multispecies biofilm
RNA-seq of coding RNA
Streptococcus anginosus
6
14/04/2017
-
ENA
153
-
Microarray and transcript expression analysis of P. aeruginosa grown with or without bacterial (Delftia tsuruhatensis SJ01) extracts
transcription profiling by array
Pseudomonas aeruginosa PAO1
2
12/04/2017
-
130
-
Profiling Period 2 (PER2) mediated pathways following ischemic preconditioning (IPC) of the mouse heart using a genome array with 352 abundantly expressed and well-characterized micro RNAs
transcription profiling by RT-PCR
Mus musculus
3
12/04/2017
-
163
-
Time course Pho/dSfmbt Chromatin Immunoprecipitation on Drosophila melanogaster embryos during embryogenesis
ChIP-seq
Drosophila melanogaster
8
11/04/2017
-
ENA
212
-
Expression level of an industrial yeast strain producing isobutanol and wild-type
transcription profiling by array
Saccharomyces cerevisiae
6
10/04/2017
110
-
Use of clinical chromosomal microarray in Chinese patients with autism spectrum disorder - implications of a copy number variation involving dpp10 (Perkin Elmer CGX)
comparative genomic hybridization by array
Homo sapiens
1
07/04/2017
-
123
-
Use of clinical chromosomal microarray in Chinese patients with autism spectrum disorder - implications of a copy number variation involving dpp10 (CGX-12)
comparative genomic hybridization by array
Homo sapiens
9
07/04/2017
-
126
-
Transcriptomic profiling of chicken lung epithelial cells during low pathogenic avian influenza infection
transcription profiling by array
Gallus gallus
4
07/04/2017
-
219
-
Transcription profiling by array of wild-type and NCED3 mutant Arabidopsis plants under dehydration stress
transcription profiling by array
Arabidopsis thaliana
32
07/04/2017
-
307
-
In situ Hi-C study of chromatin conformation during early Drosophila development
Hi-C, ChIP-seq
Drosophila melanogaster
45
06/04/2017
ENA
811
-
Gene expression analysis of PDX1+ sub populations hESC-derived pancreatic endoderm cells and posterior foregut endoderm
transcription profiling by array
Homo sapiens
12
05/04/2017
-
267
-
Transcriptional profiling of antiestrogen-sensitive and -resistant MCF-7 cells
transcription profiling by array
Homo sapiens
20
05/04/2017
323
-
Changes in gene expression during G-CSF-induced emergency granulopoiesis in humans
transcription profiling by array
Homo sapiens
15
04/04/2017
-
326
-
Gene expression profiles of control versus Prdm16-overexpressing cells
transcription profiling by array
Mus musculus
2
03/04/2017
-
218
-
Digital Karyotyping for Detecting Chromosome Alterations
genotyping by array
Homo sapiens
12
03/04/2017
226
-
Transcription profiling by high throughput sequencing of Zika virus-infected human brain organoids
RNA-seq of coding RNA
Homo sapiens
6
03/04/2017
-
ENA
370
-
Transcription profiling by array of mouse embryonic jejunum explants treated with TGF-B1
transcription profiling by array
Mus musculus
12
03/04/2017
220
-
Transcription profiling by array of Magnaporthe oryzae wild type and Tpc1 mutant strains
transcription profiling by array
Magnaporthe oryzae 70-15
4
03/04/2017
191
-
Transcriptional responses in bovine skin during blood feeding of the cattle tick, Rhipicephalus microplus
transcription profiling by array
Bos indicus, Bos taurus
26
02/04/2017
-
213
-
Transcription profiling by array of human hematopoietic stem cells isolated from type 1 diabetes patients and healthy controls
transcription profiling by array
Homo sapiens
8
02/04/2017
-
288
-
Comparative systems toxicology analysis of cigarette smoke and aerosol from a candidate modified risk tobacco product in organotypic human gingival epithelial cultures: a 3-day repeated exposure study (miRNA data)
microRNA profiling by array
Homo sapiens
81
01/04/2017
254
-
Comparative systems toxicology analysis of cigarette smoke and aerosol from a candidate modified risk tobacco product in organotypic human gingival epithelial cultures: a 3-day repeated exposure study (mRNA data)
transcription profiling by array
Homo sapiens
81
01/04/2017
297
-
Protective vaccination induces differential miRNA expression in the liver of Balb/c mice during crisis of Plasmodium chabaudi blood-stage malaria
microRNA profiling by array
Mus musculus
30
01/04/2017
-
231
-
Microarray/gene expression analysis of RNA isolated with two different protocols from human blood sampled on PAXgene and Tempus
transcription profiling by array
Homo sapiens
87
01/04/2017
-
208
-
Microarray/gene expression analysis of RNA isolated with two different protocols from human blood sampled on PAXgene and Tempus
transcription profiling by array
Homo sapiens
19
01/04/2017
-
174
-
A transit amplifying population underpins the efficient regenerative capacity of the testis
transcription profiling by array
Mus musculus
8
01/04/2017
-
156
-
Genome-wide mRNA expression status of non-B non-C hepatocellular carcinoma assessed by SurePrint G3 Human GE 8x60K v2 Microarray (Agilent, USA)
transcription profiling by array
Homo sapiens
30
01/04/2017
-
327
-
Genome-wide microRNA expression status of non-B non-C hepatocellular carcinoma assessed by 3D-Gene Human miRNA Oligo Chip (Toray, Japan)
microRNA profiling by array
Homo sapiens
48
01/04/2017
-
306
-
Genome-wide DNA methylation status of non-B non-C hepatocellular carcinoma assessed by Infinium HumanMethylation450 BeadChip Kit (Illumina, USA)
methylation profiling by array
Homo sapiens
86
01/04/2017
-
295
-
The role of insulin resistance in experimental diabetic retinopathy - genetic and molecular aspects
transcription profiling by array
Rattus norvegicus
35
31/03/2017
-
309
-
GENCODE PCR-Seq Batch XVII
RNA-seq of coding RNA, RNA-seq of non coding RNA
Homo sapiens
32
31/03/2017
-
ENA
209
-
Transcriptome analyses of the impact of Hap5 transcription factor in the pathogenic yeast Candida glabrata
transcription profiling by array
Candida glabrata
6
31/03/2017
-
135
-
Transcriptome before and 10 min after valine induced isoleucine starvation in Escherichia coli K12 grown in minimal MOPS glucose medium at 37 C
RNA-seq of coding RNA, RNA-seq of non coding RNA
Escherichia coli K-12
2
31/03/2017
-
ENA
145
-
Brassica nigra challenged by Pieris brassicae, eggs of Pieris brassicae, Xanthomonas campestris pv. raphani, Brevicoryne brassicae or by combined stresses eggs of P. brassicae / P. brassicae, X. campestris / P. brassicae, B. brassicae / P. brassicae
transcription profiling by array
Brassica nigra
38
31/03/2017
-
143
-
Transcription profiling of T cells from healthy controls and patients with seasonal allergic rhinitis before and after one year of sublingual immunotherapy
transcription profiling by array
Homo sapiens
24
31/03/2017
-
155
-
EGR1 ChIP-seq targeted to Npy and its receptors
ChIP-seq
Mus musculus
2
30/03/2017
-
ENA
136
-
Gene expression profiles between mtROShigh and mtROSlow cells dissociated from E14.5 neocortical cells were compared by microarray
transcription profiling by array
Mus musculus
4
30/03/2017
-
125
-
microRNA profiling for prediction of chemoradiation efficacy in locally advanced head and neck squamous cell carcinoma
microRNA profiling by array
Homo sapiens
48
30/03/2017
-
262
-
Single cell RNA-sequencing of Spike-ins and mESC using Smart-Seq2 on C1 System
RNA-seq of coding RNA from single cells
Mus musculus
96
29/03/2017
-
ENA
215
-
Single cell RNA-sequencing of Spike-ins and mESC using Smart-Seq2 on C1 system (Replicate run)
RNA-seq of coding RNA from single cells
Mus musculus
61
29/03/2017
-
ENA
175
-
RNA-seq data from the trachea epithelial cells of two inbred chicken lines at three time points after challenge with lentogenic Newcastle disease virus
RNA-seq of coding RNA
Gallus gallus
48
29/03/2017
-
ENA
241
-
Single cell RNA-sequencing of Spike-ins and mESC using SMARTer on C1 System
RNA-seq of coding RNA from single cells
Mus musculus
96
28/03/2017
-
ENA
183
-
Antibody repertoire RNA-seq throughout key stages of mouse B-cell development (pre-B-cells, naive B cells, plasma cells)
RNA-seq of coding RNA
Mus musculus
71
28/03/2017
-
ENA
532
-
TSLPR expression marks a functionally discrete subset of human monocytes elicited by TLR4 activation
RNA-seq of coding RNA
Homo sapiens
6
28/03/2017
-
ENA
111
-
Genomic atlas of human adrenal and gonad development
transcription profiling by array
Homo sapiens
53
27/03/2017
-
301
-
RNA-seq of porcine peripheral whole blood from pig divergently selected for residual feed intake and treated with lipopolysaccharide
RNA-seq of coding RNA
Sus scrofa
32
24/03/2017
-
ENA
192
-
Comparative analysis of Bruno-3 gain of function in Drosophila larval muscles
comparative genomic hybridization by array
Drosophila melanogaster
3
24/03/2017
-
127
-
Transcription profiling by array of Arabidopsis roots infected with the cyst nematode H. schachtii
transcription profiling by array
Arabidopsis thaliana
6
23/03/2017
-
218
Transcription profiling by array of eight human Klinefelter syndrome patients (47,XXY) and eight human controls
transcription profiling by array
Homo sapiens
16
23/03/2017
-
168
-
Transcripton profiling by array of the cellular subpopulations that compose the hierarchy of normal human mammary epithelial cells
transcription profiling by array
Homo sapiens
20
23/03/2017
-
306
-
Transcription profiling by array of Arabidopsis roots treated with nematode aqueous diffusate (NemaWater)
transcription profiling by array
Arabidopsis thaliana
6
22/03/2017
-
174
Nanostring microRNA microarry analysis of p53 and Mdm2 knockout mouse hearts compared to vehicle-injected negative controls
microRNA profiling by array
Mus musculus
12
22/03/2017
-
227
-
Transcription profiling of wild type and Stella knockout oocytes, wild type and Stella maternal/zygotic knockout embryos to study to the role of Stella in early mouse development
RNA-seq of coding RNA
Mus musculus
66
22/03/2017
-
ENA
317
-
Retinoic acid mediated neural and mesoderm specification during vertebrate trunk development
RNA-seq of coding RNA from single cells
Mus musculus
539
22/03/2017
-
ENA
493
-
Gene expression analysis in mouse embryonic stem cells containing β-catenin lysine 49 to alanine mutation
transcription profiling by array
Mus musculus
12
21/03/2017
133
-
Single-cell RNA-sequencing resolves a CD4+ T cell fate bifurcation
RNA-seq of coding RNA from single cells
Mus musculus
1598
21/03/2017
-
ENA
788
Gene network analysis of interstitial macrophages after treatment with induced pluripotent stem cells secretome (iPSC-cm) in the bleomycin injured rat lung
transcription profiling by array
Rattus norvegicus
7
20/03/2017
-
161
Identification of Interferon Regulated Genes (IRGs) in the chicken lung and spleen
transcription profiling by array
Gallus gallus
32
20/03/2017
-
149
-
RNA-seq of Cellulophaga baltica phage 18:3 infection
RNA-seq of coding RNA
Cellulophaga baltica
36
20/03/2017
-
ENA
149
-
Transcription profiling by array of Anopheles gambiae: Tiassale following Maf-S knockdown by RNA interference
transcription profiling by array
Anopheles gambiae
5
19/03/2017
-
160
-
Methylation profiling by array of dentate gyrus in the rat model of long-term potentiation
methylation profiling by array
Rattus norvegicus
8
16/03/2017
-
195
-
RNA-Seq analysis of transcriptomes of B. amyloliquefaciens FZB42 in biofilm formation and planktonic cells
RNA-seq of coding RNA
Bacillus amyloliquefaciens
4
16/03/2017
-
ENA
149
-
ChIPSeq profiling of LIR3 binding sites in C.elegans
ChIP-seq
Caenorhabditis elegans
3
16/03/2017
-
ENA
150
-
Functional sequestration of MOAG-2/LIR-3 by polyglutamine expansion proteins
RNA-seq of coding RNA
Caenorhabditis elegans
27
16/03/2017
-
ENA
169
-
Expression or knock-down of ZC3H32 in Trypanosoma brucei
RNA-seq of coding RNA
Trypanosoma brucei
2
15/03/2017
-
3
-
Single cell RNA-sequencing of Spike-ins and mESC using STRT-Seq on C1 System
RNA-seq of coding RNA from single cells
Mus musculus
1
15/03/2017
-
ENA
205
-
Effect of MIR-375 expression on UM-SCC-1
transcription profiling by array
Homo sapiens
6
15/03/2017
-
240
-
Whole genome gene expression analysis of a genomic mouse model of tauopathy
transcription profiling by array
Mus musculus
6
15/03/2017
164
-
Study of the quorum sensing regulon of the acidophilic Acidithiobacillus ferrooxidans ATCC23270 with cDNA microarrays
transcription profiling by array
Acidithiobacillus ferrooxidans ATCC 23270
12
15/03/2017
-
143
-
OFD1 interacts with the Preinitiation complex of translation and regulates translation of specific targets in the kidney
transcription profiling by array
Mus musculus
8
15/03/2017
-
194
-
Single cell RNA-sequencing of Spike-ins and mESC using Smart-Seq2 on 96-well plates
RNA-seq of coding RNA from single cells
Mus musculus
56
14/03/2017
-
ENA
261
-
RNA-seq analysis of neutrophils from CD40L-deficient patients and healthy controls, as well as HL-60 promielocytic cell line
RNA-seq of coding RNA
Homo sapiens
24
14/03/2017
ENA
395
-
Mouse bone marrow-derived dendritic cell differentiation in dense and sparse cultures
transcription profiling by array
Mus musculus
16
14/03/2017
-
139
-
Identification of target genes of the transcription factors TCF1 and TCF3 in mouse embryonic stem cells (ChIP-Seq)
ChIP-seq
Mus musculus
4
14/03/2017
-
ENA
146
-
Transcription profiling by array of mouse white adipose tissue from miR-22 knockouts and littermates
transcription profiling by array
Mus musculus
6
13/03/2017
-
164
-
Transcription profiling by array of skeletal muscles from miR-22 KO, miR-22/ERalpha knockout, and miR-22KO/muscle-specific ERalpha knockout mice against wild type controls to study the mutual regulation of miR-22 and ERalpha in muscle tissue
transcription profiling by array
Mus musculus
18
13/03/2017
-
157
-
Generation of a new mouse model of glaucoma characterized by reduced expression of the AP-2 and AP-2
DNA-seq
Mus musculus
1
10/03/2017
-
ENA
175
-
DNA methylation variations are required for reversible EMT induced by cancer-associated fibroblasts in PCa cells
RNA-seq of coding RNA
Homo sapiens
12
09/03/2017
-
ENA
271
-
Gene expression data for worker honey bees experimentally exposed to a dual infection with Deformed wing virus and Nosema ceranae
transcription profiling by array
Apis mellifera
20
08/03/2017
226
-
Single cell RNA-sequencing of Spike-ins and Control RNA using 10x Genomics Chromium system
RNA-seq of coding RNA from single cells
Homo sapiens
2
08/03/2017
-
ENA
392
-
Transcription profiling of THP-1 cells under hypoxic growth conditions
transcription profiling by array
Homo sapiens
9
08/03/2017
-
256
-
MiRNome profiling of glioblastoma tissues and peritumoral regions
microRNA profiling by high-throughput sequencing
Homo sapiens
23
08/03/2017
-
239
-
Myocardial Gene Expression Profiling to Predict and Identify Cardiac Allograft Acute Cellular Rejection
transcription profiling by array
Homo sapiens
36
07/03/2017
195
-
Impact of BRAF kinase inhibitors on miRNomes and transcriptomes of melanoma cells (gene expression dataset)
transcription profiling by array
Homo sapiens
18
06/03/2017
-
310
-
Impact of BRAF kinase inhibitors on miRNomes and transcriptomes of melanoma cells (miRNA dataset)
microRNA profiling by array
Homo sapiens
18
06/03/2017
-
239
-
RNA-seq of sea ice bacteria grown at two temperatures and two growth phases
RNA-seq of coding RNA
Polaribacter irgensii, Shewanella frigidimarina
8
05/03/2017
-
ENA
166
-
Gene expression profile of in vivo and in vitro matured human oocytes revealed by microarray analysis
transcription profiling by array
Homo sapiens
12
05/03/2017
-
168
-
Expression data from Ribonuclease Inhibitor (RI/Rnh1) deficient Human K562 cells
RNA-seq of coding RNA
Homo sapiens
6
05/03/2017
-
ENA
163
-
Ultra-deep sequencing of ribosome-associated poly-adenylated RNA in early Drosophila embryo reveals hundreds of conserved translating sORFs
RNA-seq of coding RNA
Drosophila melanogaster
3
05/03/2017
-
ENA
157
-
Fatty acid composition of developing tree peony (Paeonia section Moutan DC.) seeds and transcriptome analysis during seed development
RNA-seq of coding RNA
Paeonia ostii
6
04/03/2017
-
ENA
141
-
DNA methylation variations are required for reversible EMT induced by cancer-associated fibroblasts in PCa cells
methylation profiling by array
Homo sapiens
24
03/03/2017
-
254
-
Transcriptomic Analysis of Responses to Imbalanced Carbon:Nitrogen Availabilities in Rice Seedlings
transcription profiling by array
Oryza sativa Japonica Group
12
02/03/2017
-
165
-
Transcriptomic profiling of lung monocytes and macrophages in mice
transcription profiling by array
Mus musculus
14
01/03/2017
190
-
Transcriptional regulation of human pterygial-derived fibroblasts in response to FCS and TGFbeta
transcription profiling by array
Homo sapiens
12
01/03/2017
143
-
Transcription profiling of tobacco leaf expressing ascorbate oxidase (AO) under low and high light conditions to study the role of AO in the acclimation of photosynthesis to high light
transcription profiling by array
Nicotiana tabacum
18
01/03/2017
-
130
-
A cytosolic Ezh1 isoform modulates PRC2-Ezh1 repressive function as adaptive epigenetic response in post-mitotic cells
ChIP-seq
Mus musculus
10
01/03/2017
-
ENA
176
-
Transcription profiling by array of acute myeloid leukemia HL-60 cells with isocitrate dehydrogenase mutations and the all-trans-retinoic acid myeloid differentiation pathway
transcription profiling by array
Homo sapiens
26
01/03/2017
-
224
-
A late blight effector promotes a plant growth and development pathway to antagonise immunity
transcription profiling by array
Solanum tuberosum
8
01/03/2017
-
137
-
Expression Profiling of Avian Pathogenic E. coli WT and mutant
RNA-seq of coding RNA
Escherichia coli K-12
12
01/03/2017
-
ENA
139
-
A dynamic switch of Ezh1 isoforms controls PRC2 mediated adaptive epigenetic response in post-mitotic cells
RNA-seq of coding RNA
Mus musculus
6
01/03/2017
-
ENA
149
-
Transcriptome profiling of switchgrass over expressing Medicago STENOFOLIA (STF) gene
transcription profiling by array
Panicum virgatum
6
28/02/2017
-
108
-
Deletion of ribosomal protein genes is a common vulnerability in human cancer, particularly in concert with TP53 mutation
genotyping by array
Homo sapiens
93
28/02/2017
-
363
-
Gene expression analysis of the wild-type (N3433) and pcnB mutant (IBPC903) using custom microarrays
transcription profiling by array
Escherichia coli str. K-12 substr. MG1655
3
28/02/2017
-
124
-
Custom microarray analysis of small RNAs expression in E.coli with a focus on central carbon metabolism
transcription profiling by array
Escherichia coli str. K-12 substr. MG1655
3
28/02/2017
-
120
-
ATAC-seq of human lymphoblastoid cells (LCL)
ATAC-seq
Homo sapiens
54
28/02/2017
-
ENA
144
-
Transcription profiling by array of the cerebral hemisphere of chickens selected for and against fearfulness
transcription profiling by array
Gallus gallus
23
28/02/2017
-
85
-
Transcription profiling by array of the hypothalmus of chickens hatched in a hatchery or stress free environment
transcription profiling by array
Gallus gallus
16
28/02/2017
-
80
-
Temporal gene expression profiling of ischemic brain injury in rats after Semax and Pro-Gly-Pro treatment
transcription profiling by array
Rattus norvegicus
6
28/02/2017
114
-
Transcription profiling by array of heat-stressed Arabidopsis plants
transcription profiling by array
Arabidopsis thaliana
4
28/02/2017
-
157
-
Transcription profiling by array of heat-stressed maize plants
transcription profiling by array
Zea mays subsp. mays
8
28/02/2017
-
127
-
Transcription profiling of chicken liver after alpha- and gamma-tocopherol supplementation in case of increased oxidative stress susceptibility
transcription profiling by array
Gallus gallus
20
28/02/2017
86
-
The yeast osmostress response is carbon source dependent
RNA-seq of coding RNA
Saccharomyces cerevisiae S288c
15
27/02/2017
-
ENA
151
-
ApoE-MouseExperiment (heart)
transcription profiling by array
Mus musculus
168
27/02/2017
172
-
Gene expression in cutaneous lupus erythematosus
transcription profiling by array
Homo sapiens
16
24/02/2017
-
155
-
Base resolution maps of mutations, 5-methylcytosine and 5-hydroxymethylcytosine, and transcriptome of blood, tumour and margin samples from a glioblastoma multiforme patient
DNA-seq, methylation profiling by high throughput sequencing, RNA-seq of coding RNA
Homo sapiens
17
24/02/2017
ENA
573
-
DNA methylation landscape of ocular tissue relative to matched peripheral blood
methylation profiling by array
Homo sapiens
58
23/02/2017
124
-
Transcription profiling of heart tissue from mice with heart-specific knockout of p53 and Mdm2
transcription profiling by array
Mus musculus
21
23/02/2017
-
212
-
Translational profiling of HEK293 cells exposed to cold shock (32 degrees C) and untreated (37 degrees C)
transcription profiling by array
Homo sapiens
6
23/02/2017
-
108
-
Transcription profiling by array of human CD138 purified bone marrow plasma cells, CD27 memory B-cells, polyclonal plasmablastic cells and human myeloma cell lines
transcription profiling by array
Homo sapiens
58
23/02/2017
-
414
-
Transcript profiling of plants ectopically expressing DOF5.4 / OBF BINDING PROTEIN 4 (OBP4)
RNA-seq of coding RNA
Arabidopsis thaliana
11
23/02/2017
ENA
160
-
Transcription profiling by array of Arabidopsis NCED3 mutants and wild-type controls under heat stress
transcription profiling by array
Arabidopsis thaliana
4
23/02/2017
-
128
-
Transcription profiling by array of Arabidopsis HSF triple mutants and wild-type controls under heat stress
transcription profiling by array
Arabidopsis thaliana
4
23/02/2017
-
118
-
Transcription profiling by array of heat-stressed soybean plants
transcription profiling by array
Glycine max
4
23/02/2017
-
100
-
Transcription profiling by array of heat-stressed rice plants
transcription profiling by array
Oryza sativa Japonica Group
4
23/02/2017
-
119
-
Transition of embryonic stem cells from ground state pluripotency (RNA-seq)
RNA-seq of coding RNA, RNA-seq of non coding RNA
Mus musculus
8
22/02/2017
-
ENA
225
-
Transcription profiling by array of mouse embryonic stem cells to study the transition from ground state pluripotency
transcription profiling by array
Mus musculus
12
22/02/2017
-
163
-
Transcription profiling by array of Pichia pastoria strains with different gene dosage of Rhizopus oryzae lipase (Rol) as a model protein
transcription profiling by array
Komagataella pastoris
35
22/02/2017
135
-
TEF-seq/NET-seq applied to factors Rpb3, Paf1, Spt6, Spt16, Cet1, Pcf11, Ssu72, Set2
RNA-seq of coding RNA
Saccharomyces cerevisiae
38
22/02/2017
ENA, ENA
383
-
RNA sequencing of CD45-negative cells isolated from CNS and lung of GM-CSFind x CD4-CreERT2 and control mice
RNA-seq of coding RNA
Mus musculus
15
21/02/2017
ENA
124
-
Differential analysis of GM-CSF-induced inflammatory monocyte-derived cells (MCs) isolated from various organs
RNA-seq of coding RNA
Mus musculus
15
21/02/2017
ENA
135
-
ChIP-seq analysis identifies p27(Kip1)-target genes involved in cell adhesion and cell signalling in mouse embryonic fibroblasts
ChIP-seq
Mus musculus
2
21/02/2017
ENA
158
-
RNA sequencing data of bone marrow endothelial cell subpopulations type H, type E and type L
RNA-seq of coding RNA
Mus musculus
9
20/02/2017
-
ENA
349
-
Rare tumor cell isolation and genomic variation detection in pleural effusion samples from lung cancer patients
DNA-seq
Homo sapiens
6
17/02/2017
-
ENA
416
-
Transcription profiling by array of mouse neural stem cells following CRISPR/Cas9 knockdown of Disp3
transcription profiling by array
Mus musculus
11
17/02/2017
142
-
Transcription profiling by array of Drosophila melanogaster park25 (parkin) and pink1 (Pink1) mutants to identify neuron-specific transcriptional changes that may be relevant to Parkinson's disease
transcription profiling by array
Drosophila melanogaster
36
17/02/2017
-
235
-
RNA-seq of human and mouse stem-cell derived neurons and mouse primary cortical neurons after KCl-induced membrane depolarization against controls
RNA-seq of coding RNA
Homo sapiens, Mus musculus
30
16/02/2017
-
ENA
296
-
Type I interferon-regulated gene expression and signaling in murine mixed glial cells lacking signal transducers and activators of transcription 1or 2 or interferon regulatory factor 9
transcription profiling by array
Mus musculus
32
15/02/2017
238
-
Response of Candida albicans to taurocholate
transcription profiling by array
Candida albicans
4
15/02/2017
-
139
-
Transcription profiling by high throughput sequencing of Medicago truncatula hairy root lines overexpressing TSAR1 or TSAR2
RNA-seq of coding RNA
Medicago truncatula
9
15/02/2017
-
ENA
256
-
Transcriptional profilling of female mice liver as a function of age
transcription profiling by array
Mus musculus
60
15/02/2017
257
-
Methylation profiling of ten breast cancer cell lines to identify new targets for basal-like breast cancers
methylation profiling by high throughput sequencing
Homo sapiens
10
14/02/2017
-
ENA
305
-
RNASeq of ten human breast cancer cell lines
RNA-seq of coding RNA
Homo sapiens
10
14/02/2017
-
ENA
429
-
MicroRNA sequencing of human serum exosomes from women with different age and hormonal status
microRNA profiling by high throughput sequencing
Homo sapiens
31
14/02/2017
-
ENA
165
-
Transcriptome sequencing of bloodstream form Trypanosoma brucei expressing VSG121
RNA-seq of coding RNA
Trypanosoma brucei
1
12/02/2017
-
ENA
140
-
RNA-seq of different tissues from Sus scrofa
RNA-seq of coding RNA
Sus scrofa
60
10/02/2017
-
ENA
170
RNA-seq analysis of budding yeast wild type (BY4741) and prp45(1-169) mutant
RNA-seq of coding RNA
Saccharomyces cerevisiae
4
10/02/2017
-
ENA
243
-
Transcription profiling of Brassica nigra challenged by ozone, Pieris brassicae, or both ozone followed by P. brassicae feeding
transcription profiling by array
Brassica nigra
17
10/02/2017
-
189
-
Time series RNA-seq of temperature-entrained and light-entrained bloodstream and procyclic form Trypanosoma brucei cultures
RNA-seq of coding RNA
Trypanosoma brucei
78
10/02/2017
-
ENA
233
-
Transcription profiling by array of human CD138 purified bone marrow plasma cells from patients with multiple myeloma
transcription profiling by array
Homo sapiens
630
09/02/2017
-
724
-
Transcription profiling by array of human CD138 purified bone marrow plasma cells from relapsed multiple myeloma patients
transcription profiling by array
Homo sapiens
82
09/02/2017
-
418
-
Microarray data of foetal liver Lin- cKit+ cells obtained from Fh1-deficient and control 14.5 dpc mouse embryos
transcription profiling by array
Mus musculus
7
08/02/2017
-
179
-
Transcriptional profiling of calyx abscission zone cells of citrus fruits and adjacent fruit rind cells during ethylene-promoted fruit abscission
transcription profiling by array
Citrus sinensis
18
08/02/2017
-
191
-
miRNA profiling in leaf and cork tissues of Q. suber reveals novel miRNAs and tissue-specific expression patterns
microRNA profiling by high throughput sequencing
Quercus suber
2
07/02/2017
-
87
-
Transcription profiling by microarray of barley mutant (G132) and its wild type (Hordeum vulgare cv. Graphic) under high CO2 concentration
transcription profiling by array
Hordeum vulgare
24
07/02/2017
213
-
Detection of transposon RNA fusions
RNA-seq of coding RNA
Mus musculus
232
07/02/2017
-
ENA
251
-
Microarray time course transcriptional profiling of Human CD4+ T Cell activation across 20 donors
transcription profiling by array
Homo sapiens
137
06/02/2017
-
335
-
Distinct and sexually dimorphic X dosage compensation states in the mammalian germline
RNA-seq of coding RNA
Mus musculus
184
06/02/2017
ENA
555
-
Transcription profiling by array of IDH1 mutant and wild type human glioblastoma samples
transcription profiling by array
Homo sapiens
52
05/02/2017
-
457
-
Altered expression of maize PLASTOCHRON1 enhances biomass and seed yield by extending cell division duration
RNA-seq of coding RNA
Zea mays
12
04/02/2017
-
ENA
237
-
Whole genome sequencing of spontaneous tumors arising in mice as a result of centrosome amplification
whole chromosome random sequencing
Mus musculus
14
04/02/2017
-
ENA
237
-
Expression profiling of budding cells in colorectal cancer suggests an EMT-like phenotype and molecular subtype switching
RNA-seq of coding RNA
Homo sapiens
16
04/02/2017
-
ENA
276
-
Genome-Wide Identification of the FRS12 Binding Sites by Tandem Chromatin Affinity Purification – Seq Analysis in Arabidopsis thaliana
ChIP-seq
Arabidopsis thaliana
3
04/02/2017
-
ENA
267
-
RNA-seq of coding RNA to identify genes regulated by FRS12 at night time in Arabidopsis thaliana
RNA-seq of coding RNA
Arabidopsis thaliana
6
04/02/2017
-
ENA
208
-
GRO-seq analysis U1810 cells after 8h Rapamycin treatment and DMSO control
GRO-seq
Homo sapiens
2
03/02/2017
-
ENA
233
-
Gene expression profiles in cancer stem cells isolated as ALDHhigh cells from human endometrioid adenocarcinoma cells, HEC-1
transcription profiling by array
Homo sapiens
2
03/02/2017
-
200
-
Effect of CtBP1 knockdown in SCC25 cells
transcription profiling by array
Homo sapiens
6
03/02/2017
-
216
RNA sequencing of Geranium pyrenaicum and G. robertianum petioles exposed to 2 or 11.5 hours of control white light or low R:FR light
RNA-seq of coding RNA
Geranium pyrenaicum, Geranium robertianum
24
01/02/2017
ENA
84
-
Novel genes involved in the pathophysiology of gonadotropin-dependent adrenocortical tumorigenesis in mice
transcription profiling by array
Mus musculus
24
01/02/2017
-
223
-
Identification of a tumor suppressor network in T-cell leukemia
genotyping by array
Homo sapiens
8
01/02/2017
-
241
-
The transcriptional signature of ascites-associated macrophages is linked to interferon signaling and a favorable clinical outcome in a subgroup of ovarian carcinoma patients
RNA-seq of coding RNA
Homo sapiens
13
01/02/2017
-
ENA
293
-
Comparison of root transcriptomes in four soybean cultivars with high and low isoflavonoid content
RNA-seq of coding RNA
Glycine max
12
01/02/2017
-
ENA
150
RNA-seq in HUVECs overexpressing Sox18 and treated with Sm4
RNA-seq of coding RNA
Homo sapiens
12
01/02/2017
-
ENA
166
-
Sox18 ChIP-seq in HUVECs
ChIP-seq
Homo sapiens
4
01/02/2017
-
ENA
224
-
SOX7 ChIP-seq in HUVECs
ChIP-seq
Homo sapiens
4
01/02/2017
-
ENA
197
-
microRNA profiling by array of human umbilical venous endothelial cells (HUVECs) stimulated with bone morphogenetic protein 4 (BMP4)
microRNA profiling by array
Homo sapiens
12
01/02/2017
141
-
Transcription profiling of DcgA knockout in Dictyostelium discoideum
RNA-seq of coding RNA
Dictyostelium discoideum
8
01/02/2017
-
ENA
134
-
Expression profiling experiment on Pkd1-mutant mice and mice induced with nephrotoxin DCVC
RNA-seq of coding RNA
Mus musculus
21
31/01/2017
ENA
239
5-hydroxymethylcytosine (5hmC) methylation profiling of adult mouse brain and liver tissues (hMeDIP-seq)
methylation profiling by high throughput sequencing
Mus musculus
24
31/01/2017
-
ENA
228
-
Expression profiling of adult mouse brain and liver tissues (RNA-seq)
RNA-seq of coding RNA
Mus musculus
24
31/01/2017
-
ENA
240
-
RNA-seq of two Trifolium pratense genotypes, Tripo and Lasang, from early to late developmental stages of flower development
RNA-seq of coding RNA
Trifolium pratense
12
31/01/2017
-
ENA
162
-