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AccessionTitleTypeOrganismAssaysReleasedProcessedRawViewsAtlas
Array profiling of different TUT4 and TUT7 deficient mouse tissues/cells against controls
transcription profiling by array
Mus musculus
32
Today
-
1
-
Transcription profiling of Arabidopsis thaliana wild-type plants under a high salinity stress condition
transcription profiling by array
Arabidopsis thaliana
4
Today
-
-
-
Transcription profiling of the Arabidopsis thaliana srk2abgh quadruple mutant under a high salinity stress condition
transcription profiling by array
Arabidopsis thaliana
4
Today
-
-
-
A Liver Capsular Network of Monocyte-Derived Macrophages Restricts Hepatic Dissemination of Intraperitoneal Bacteria by Neutrophil Recruitment
transcription profiling by array
Mus musculus
7
Yesterday
-
-
-
Transcription profiling by array of a novel prostate progenitor cell (LSCmed) in mouse in contrast to prostate luminal and basal stem cells
transcription profiling by array
Mus musculus
9
15/08/2017
-
-
-
Transcription profiling by array of SPEN-expressing and control T47D cells grown in the presence or absence of hormones (Estradiol or Tamoxifen)
transcription profiling by array
Homo sapiens
18
15/08/2017
-
-
-
Transcription profiling by array of MCF-10A cells transfected with Split Ends (SPEN)-silencing or control siRNA
transcription profiling by array
Homo sapiens
6
15/08/2017
-
-
-
RNA-seq analysis of transport deficient S. pneumoniae TIGR4 mutants
RNA-seq of coding RNA
Streptococcus pneumoniae
8
14/08/2017
ENA
14
-
Microarray of non-polarized and M1- and M2-polarized canine macrophages in vitro
transcription profiling by array
Canis lupus familiaris
18
10/08/2017
22
-
Transcriptomics during the differentiation of human pluripotent stem cells to hepatocyte-like cells
transcription profiling by array
Homo sapiens
62
09/08/2017
25
-
RNA-seq of whole lungs from Irgm1-/- and wildtype littermates mice that were either uninfected or infected with influenza for 3, 6, or 10 days
RNA-seq of coding RNA
Mus musculus
48
08/08/2017
ENA
36
-
Gene expression profiling in patients with polymyalgia rheumatica before and after symptom abolishing glucocorticoid treatment
transcription profiling by array
Homo sapiens
36
08/08/2017
-
25
-
RNA-seq of chemically reset human naive pluripotent stem cells
RNA-seq of coding RNA
Homo sapiens
30
07/08/2017
-
ENA
33
-
RNA sequencing of T. brucei EATRO1125 expressing RBP10
RNA-seq of coding RNA
Trypanosoma brucei
8
07/08/2017
-
ENA
21
-
Role assessment of the type VI secretion systems during disease interactions of Erwinia amylovora with its plant host by comparing the in planta and in vitro RNA-seq transcriptomes of wildtype CFBP 1430 and its T6SS double mutant (T6-d1d3)
RNA-seq of coding RNA
Erwinia amylovora
4
07/08/2017
-
ENA
17
-
RNA-seq analysis of wild type Columbia seedlings
RNA-seq of coding RNA
Arabidopsis thaliana
3
07/08/2017
-
ENA
20
-
RNAseq analysis of wild type dark grown PSB-D cell cultures
RNA-seq of coding RNA
Arabidopsis thaliana
3
07/08/2017
-
ENA
10
-
Identification of gene expression signature for cigarette smoke exposure response--from man to mouse
transcription profiling by array
Homo sapiens
302
05/08/2017
35
-
Identification of gene expression signature for cigarette smoke exposure response--from man to mouse
transcription profiling by array
Homo sapiens
302
05/08/2017
17
-
COPD progression in C57l/6 mice in response to chronic exposure (up to 7 months) to conventional cigarette smoke or a prototype modified risk tobacco product (pMRTP) and the impact of cessation or switching to pMRTP after initial exposure to conventional cigarette smoke
transcription profiling by array
Mus musculus
194
05/08/2017
35
-
An 8-Month Systems Toxicology Inhalation/Cessation Study in Apoe-/- Mice to Investigate Cardiovascular and Respiratory Exposure Effects of a Candidate Modified Risk Tobacco Product, THS 2.2, Compared With Conventional Cigarettes
transcription profiling by array
Mus musculus
54
05/08/2017
15
-
Transcription profiling of blood from smokers, non-smokers and former smokers to identify gene expression signature for cigarette smoke exposure response
transcription profiling by array
Homo sapiens
89
05/08/2017
23
-
Transcription profiling of blood from smokers (with or without COPD), non-smokers and former smokers to identify gene expression signature for cigarette smoke exposure response
transcription profiling by array
Homo sapiens
233
05/08/2017
24
-
Transcriptional response of LPS-stimulated monocyte-derived macrophages in the presence or absence of the anti-TNF agonist Etanercept
transcription profiling by array
Homo sapiens
18
04/08/2017
40
-
Whole blood transcriptional profiling of healthy volunteers and rheumatoid arthritis patients treated with methotrexate or anti-TNF therapy after ex vivo whole blood stimulation with TNF
transcription profiling by array
Homo sapiens
16
04/08/2017
34
-
Transcriptional profiling of the tuberculin skin test in healthy volunteers and in rheumatoid arthritis patients treated with methotrexate or anti-TNF therapy
transcription profiling by array
Homo sapiens
25
04/08/2017
39
-
Genome variation and conserved regulation identify genomic regions responsible for strain specific phenotypes of metabolic syndrome in rats
RNA-seq of coding RNA
Rattus norvegicus
20
03/08/2017
ENA
20
-
Identification of high-affinity microRNA targets
RIP-seq
Mus musculus
26
03/08/2017
ENA
21
-
RNA-seq analysis of C. elegans CPEB homolog mutants
RNA-seq of coding RNA
Caenorhabditis elegans
27
03/08/2017
-
ENA
17
-
iCLIP analysis of RNA binding sites of Stau2 protein in mouse brain cells
CLIP-seq
Mus musculus
6
02/08/2017
-
ENA
27
-
RNAseq of primary human gallbladder cells, reprogrammed human gallbladder cells, and human pancreatic beta cells
RNA-seq of coding RNA
Homo sapiens
18
02/08/2017
ENA
29
-
microRNAseq of primary human gallbladder cells, reprogrammed human gallbladder cells, and human pancreatic beta cells
microRNA profiling by high throughput sequencing
Homo sapiens
4
02/08/2017
ENA
5
-
Strategies for in vivo screening and mitigation of hepatotoxicity associated with antisense drugs
RNA-seq of coding RNA
Mus musculus
79
02/08/2017
-
ENA
9
-
RNA-Seq of bacteriophage S-PM2d infecting Synechococcus spp. WH7803 at high light and low light treatments
RNA-seq of coding RNA
Synechococcus phage S-PM2
6
01/08/2017
-
ENA
4
-
RNA-seq of human tissues
RNA-seq of coding RNA
Homo sapiens
14
01/08/2017
-
ENA
22
-
RNA-seq of HEK293T cell line
RNA-seq of coding RNA
Homo sapiens
136
01/08/2017
-
ENA
31
-
Targeted sequencing of 86 regulatory elements and 12 breast cancer genes
DNA-seq
Homo sapiens
290
01/08/2017
-
ENA
16
-
ATAC-seq of HEK293T cell line
ATAC-seq
Homo sapiens
14
01/08/2017
-
ENA
7
-
Mutant Cd36 and Wars2 genes affect mass and function of brown adipose tissue in spontaneously hypertensive rats
transcription profiling by array
Rattus norvegicus
128
01/08/2017
-
4
-
Dual RNA-seq of M. tuberculosis H37Rv infecting macrophage-like THP-1 cells during 48h
RNA-seq of coding RNA
Homo sapiens, Mycobacterium tuberculosis H37Rv
42
01/08/2017
-
ENA
38
-
Methylation profiling of end-stage renal disease patients and healthy controls
methylation profiling by array
Homo sapiens
144
01/08/2017
-
9
-
Global mRNA transcriptome analysis of wild type and Hfq mutant strains of Serratia marcescens by RNAseq
RNA-seq of coding RNA
Serratia marcescens
8
01/08/2017
-
ENA
7
-
Comparison of gene expression profiling among high-grade ovarian epithelial cancer, ovarian epithelium and fallopian tube
transcription profiling by array
Homo sapiens
12
01/08/2017
-
10
-
RNA-seq analysis of date-palms treated with stress hormone ABA compared to controls
RNA-seq of coding RNA
Phoenix dactylifera
8
31/07/2017
-
ENA
10
-
RNAseq of circulating neutrophils in peripartal grazing dairy cows divergent in metabolic health
RNA-seq of coding RNA
Bos taurus
120
30/07/2017
-
ENA
14
-
Transcriptional profiling by array of mouse hearts from animals with heterozygous truncation of Igf1 gene (HZ), or HZ treated with low doses of IGF-1 (substitutive therapy) against wild-type control
transcription profiling by array
Mus musculus
3
30/07/2017
-
9
-
Global Expression profiling of mutant mouse lineage negative progenitors
transcription profiling by array
Mus musculus
10
30/07/2017
-
10
-
Global Expression profiling of mutant mouse lineage negative progenitors
transcription profiling by array
Mus musculus
33
30/07/2017
-
9
-
Global Expression profiling of mutant mouse multipotent progenitors
transcription profiling by array
Mus musculus
28
30/07/2017
-
7
-
Array Comparative Hybridisation of Acute Myeloid Leukemia's generated from mouse models of Npm1cA/+, compound Npm1cA/+; NrasG12D/+ and Npm1cA/+;Flt3ITD/+ myeloid leukemia
comparative genomic hybridization by array
Mus musculus
25
30/07/2017
-
10
-
Effect of a KRAS peptide nucleic acid clamp on the Ion Torrent sequencing protocol
DNA-seq
Homo sapiens
36
29/07/2017
ENA
13
-
RNA-seq analyses of most resistance Indica Rice varieties (Oryza sativa L.) leaves tissue under water-deficit condition
RNA-seq of coding RNA
Oryza sativa Indica Group
4
27/07/2017
-
ENA
28
-
Transcription profiling by microarray of lncRNA affected by EGF stimulation of MCF10A cells
transcription profiling by array
Homo sapiens
15
27/07/2017
16
-
Genes affected by manipulation of LIMT, a novel metastasis inhibiting lncRNA is suppressed by EGF and down-regulated in aggressive breast cancer
transcription profiling by array
Homo sapiens
12
27/07/2017
16
-
Microarray analysis of the effect of ppGpp, cdiAMP, and cdiGMP on Saccharomyces cerevisiae
transcription profiling by array
Saccharomyces cerevisiae
24
26/07/2017
14
-
RNA-seq of coding RNA from DDX6 knockout human haploid (HAP1) cells
RNA-seq of coding RNA
Homo sapiens
8
25/07/2017
ENA
38
-
Haploid genome-wide screens for essential components and negative regulators of interferon lambda signaling in human cells
DNA-seq
Homo sapiens
3
25/07/2017
-
ENA
16
-
RNA-seq of coding RNA from USP14 knockout human haploid (HAP1) cells
RNA-seq of coding RNA
Homo sapiens
8
25/07/2017
ENA
22
-
Analysis of mitochondrial gene expression with Ribosome Profiling
RNA-seq of coding RNA
Homo sapiens
3
25/07/2017
-
ENA
34
-
Cytogenetics 2.7M and Cytoscan HD 2.8M Microarrays in autistic families in the Lebanese population
comparative genomic hybridization by array
Homo sapiens
142
24/07/2017
-
31
-
RNA localization is a key determinant of neurite-enriched proteome - Riboseq
translation profiling
Mus musculus
6
23/07/2017
-
ENA
30
-
RNA localization is a key determinant of neurite-enriched proteome - RNAseq
RNA-seq of coding RNA
Mus musculus
6
23/07/2017
-
ENA
29
-
Whole transcriptome profiling of Esophageal adenocarcinoma and Barrett's
RNA-seq of coding RNA
Homo sapiens
63
23/07/2017
-
ENA
35
-
Transcriptome profiling by microarray of Caenorhabditis elegans MT2124 x CB4856 RILs used for eQTL mapping
transcription profiling by array
Caenorhabditis elegans
24
21/07/2017
-
19
-
RNA-seq of different Plodia interpunctella tissues for males and females
RNA-seq of coding RNA
Plodia interpunctella
16
19/07/2017
-
ENA
46
-
RNA-seq experiment of Drosophila melanogaster larvae reared on Aspergillus nidulans infested breeding substrate
RNA-seq of coding RNA
Drosophila melanogaster
131
19/07/2017
-
ENA
28
-
Transcription profiling by array of rice cell line N1 treated with herbicide safener fenclorim and its analogue CMP
transcription profiling by array
Oryza sativa Japonica Group
18
18/07/2017
-
34
-
mRNA time-course transcription profiling of bacteriocytes and gut tissue of pea aphids reared on standard artificial diet (AP3) and artificial diet depleted in Tyr and Phe (YFØ)
transcription profiling by array
Acyrthosiphon pisum
66
18/07/2017
-
22
-
RNA-seq of HEK293T cells treated with control b-globin siRNA and Pat1b siRNA
RNA-seq of coding RNA
Homo sapiens
8
17/07/2017
-
ENA
65
-
Glucocorticoid receptor ChIP-seq in an immortalized podocyte cell line
ChIP-seq
Homo sapiens
2
17/07/2017
ENA
30
-
Glucocorticoid therapy regulates podocyte motility by inhibition of Rac1
transcription profiling by array
Homo sapiens
6
17/07/2017
16
-
RNA-seq for splenic gene expression in response to Newcastle disease virus challenge in two chicken lines with different disease resistance
RNA-seq of coding RNA
Gallus gallus
31
16/07/2017
-
ENA
26
-
RNA-seq of different Bombyx mori tissues for males and females
RNA-seq of coding RNA
Bombyx mori
12
16/07/2017
-
ENA
22
-
Determination of mRNA half-lives in embryonic mouse skin
RNA-seq of coding RNA
Mus musculus
12
14/07/2017
-
ENA
96
-
Chipseq on Sox18Ragged-mCherry over-expressed zebrafish larvae at 26-28hpf
ChIP-seq
Danio rerio
2
13/07/2017
ENA
23
-
Whole genome expression changes in Candida albicans due to a mutation in transcription factor Grf10
transcription profiling by array
Candida albicans
3
12/07/2017
-
23
-
MicroRNA profiling by arrray of unilaterial and bilateral retinoblastoma tumours from enucleated patients with no chemotherapy history
microRNA profiling by array
Homo sapiens
12
11/07/2017
38
-
Global gene regulation during immunoglobulin class switching in human activated B cells
transcription profiling by array
Homo sapiens
18
11/07/2017
-
33
-
Transcription profiling of paw skin from young and old mice to study the effect of ageing in interfollicular epidermis
transcription profiling by array
Mus musculus
8
11/07/2017
-
30
-
A UNIQUE ENHANCER BOUNDARY COMPLEX DEFINES THE STABLE POISED STATE OF THE MOUSE RIBOSOMAL RNA GENES IN THE ABSENCE OF RRN3, UBF AND RNA POLYMERASE I TRANSCRIPTION
ChIP-seq, DNA-seq
Mus musculus
78
08/07/2017
ENA
88
-
Transcription profiling of oesophageal adenocarcinoma by RNA-seq
RNA-seq of coding RNA
Homo sapiens
6
07/07/2017
-
ENA
40
-
ATAC-seq of oesophageal cell lines and tissue samples
ATAC-seq, DNA-seq
Homo sapiens
11
07/07/2017
ENA
25
-
ETV1 ChIP-seq in OE33 esophageal adenocarcinoma cells
ChIP-seq
Homo sapiens
3
07/07/2017
ENA
43
-
Transcription profiling of oesophageal adenocarcinoma
transcription profiling by array
Homo sapiens
14
07/07/2017
-
42
-
Signatures of inflammation and impending multiple organ dysfunction in the hyperacute phase of trauma: A prospective cohort study
transcription profiling by array
Homo sapiens
118
06/07/2017
144
-
Transcription profiling by array of single and double deletion mutants involved in ribosome assembly
transcription profiling by array
Saccharomyces cerevisiae
22
06/07/2017
17
-
Transcription profiling by array of 60 deletion mutants involved in ribosome assembly
transcription profiling by array
Saccharomyces cerevisiae
107
06/07/2017
33
-
Microarray comparing gene expression changes between control, normoglycaemic mice, and mice expressing the human neonatal diabetes mutation Kir6.2-V59M in pancreatic beta-cells left diabetic for 2 weeks
transcription profiling by array
Mus musculus
8
05/07/2017
-
38
-
Gene expression profiling of biphenotypic acute leukemia
transcription profiling by array
Homo sapiens
12
05/07/2017
-
106
-
Transcription profiling of human glioblastoma cells with EGFR amplification grown in rat xenograft model
transcription profiling by array
Homo sapiens
6
05/07/2017
-
44
-
Transcription profiling by high throughput sequencing of CD8 single positive thymocytes from F5 Rag1KO TCR transgenic mice stimulated with tumor necrosis factor
RNA-seq of coding RNA
Mus musculus
11
05/07/2017
ENA
30
-
Gene expression of IKK1/2 deficient thymocytes
RNA-seq of coding RNA
Mus musculus
7
05/07/2017
ENA
36
-
Acquired TET2 mutation-linked clonal hematopoiesis in FPD/AML patient led to the development of pre-leukemic clone resulting independently in T2-ALL and AML-M0
DNA-seq
Homo sapiens
3
05/07/2017
-
ENA
22
-
Transcription profiling by array of Bacillus amyloliquefaciens FZB42 wildtype and sigD-mutants grown in media supplemented with soil extract or soil extract plus maize root exudates
transcription profiling by array
Bacillus amyloliquefaciens
9
05/07/2017
32
-
Transcription profiling by array of hepatocellular carcinoma cell lines following treatment with STAT3 shRNA and IL-6, IL-27 or IFN-gamma
transcription profiling by array
Homo sapiens
48
05/07/2017
-
50
-
Transcription profiling by array of a human embryonic kidney cell line (HEK-293) expressing mutant or wild type KIT following treatment with stem cell factor
transcription profiling by array
Homo sapiens
18
05/07/2017
-
26
-
microRNA profiling by array of human Autosomal Dominant Polycystic Kidney Disease kidney epithelial cell lines
microRNA profiling by array
Homo sapiens
6
05/07/2017
-
23
-
Gene expression profiling in human ADPKD cell lines
transcription profiling by array
Homo sapiens
6
05/07/2017
-
26
-
Transcriptome analysis of Arabidopsis expressing the transcription factor INDEHISCENT under the control of the 35S promoter after treatment with auxin
transcription profiling by array
Arabidopsis thaliana
12
05/07/2017
44
-
Transcriptome profiling after CBX7 knockdown in LNCaP cells
transcription profiling by array
Homo sapiens
12
05/07/2017
-
41
-
Long non-coding RNA expression profiling of human T cells in hepatocellular carcinoma
transcription profiling by array
Homo sapiens
9
05/07/2017
-
39
-
Transcriptome analysis in the Antarctic bacterium Pseudomonas extremaustralis at low temperatures
RNA-seq of coding RNA
Pseudomonas extremaustralis 14-3 substr. 14-3b
4
05/07/2017
-
ENA
23
-
Differences of gut mucosa gene expression between septic very low birth weight infants and their non-septic twins
transcription profiling by array
Homo sapiens
10
05/07/2017
-
44
-
Transcription profiling by array of E. faecalis V583 LexA- and wild type to investigate constitutive SOS response
transcription profiling by array
Enterococcus faecalis
2
05/07/2017
19
-
Transcription profiling of human breast cancer and scarcoma tissue and adjacent tissue to investigate alterantive splicing
transcription profiling by array
Homo sapiens
40
05/07/2017
73
-
Transcriptional differences between the peripheral and the transcription zone of the prostate
RNA-seq of coding RNA
Homo sapiens
18
04/07/2017
-
ENA
65
-
RNA-seq analysis of 2 cell line models of lung disease (A549 and BEAS-2B) and primary bronchial epithelial cells in Project 3 of Open Targets 020 - Epigenomes of Cell Lines
RNA-seq of coding RNA
Homo sapiens
7
04/07/2017
-
ENA
323
Transcription profiling by array of human extrahepatic cholangiocyte organoids, freshly isolated common bile duct cholangiocytes and embryonic stem cells
transcription profiling by array
Homo sapiens
15
04/07/2017
45
-
Analysis of transcriptomes from 21 tissues, 13 melanoma samples and 7 breast cancer cell lines, enriched for transcripts from haploblocks with intronic and intergenic GWAS SNPs
RNA-seq of coding RNA
Homo sapiens
41
04/07/2017
-
ENA
167
-
Transcription profiling by array of the differences between matched male and female breast cancer
transcription profiling by array
Homo sapiens
25
04/07/2017
-
65
-
Sphingobium Nickel resistance analysis by RNA-seq approach
RNA-seq of coding RNA
Sphingobium sp. ba1
6
03/07/2017
ENA
20
-
Gene expression between dry and imbibed seeds in vitamin C defective (vtc) mutants and wild-type Arabidopsis thaliana
RNA-seq of coding RNA
Arabidopsis thaliana
18
03/07/2017
ENA
27
-
Time of day determines Arabidopsis transcriptome and growth dynamics under mild drought
RNA-seq of coding RNA
Arabidopsis thaliana
21
03/07/2017
ENA
25
-
Transcription profiling by array of South Australian bread wheat under salt stress
transcription profiling by array
Triticum aestivum
84
02/07/2017
-
19
-
Transcription profiling by array of human hematopoietic stem cell isolated from multiple sclerosis patients and healthy controls
transcription profiling by array
Homo sapiens
8
02/07/2017
-
38
-
RNA-seq of Japonica rice with overexpression or knockdown of OsMPH1 gene, which is involved in regulation of plant height --- a major trait affecting yield potential
RNA-seq of coding RNA
Oryza sativa Japonica Group
9
01/07/2017
-
ENA
23
-
RNA-seq of Brachypodium distachyon culms from control and BdBAHD01 RNAi plants
RNA-seq of coding RNA
Brachypodium distachyon
12
01/07/2017
-
ENA
18
-
RNA-seq of Setaria viridis culms from control and SvBAHD01 RNAi plants
RNA-seq of coding RNA
Setaria viridis
9
01/07/2017
-
ENA
15
-
Gene expression analysis of lung cancer samples and healthy controls
transcription profiling by array
Homo sapiens
40
01/07/2017
-
77
-
Transcriptome profiling of human anaplastic meningioma IOMM-Lee cells following silencing of HuR (Human antigen R) gene expression by siRNA
transcription profiling by array
Homo sapiens
12
01/07/2017
-
16
-
Small RNA and total RNA sequencing of C. elegans with mutations in the hrde-1 and emb-4 genes
RNA-seq of non coding RNA
Caenorhabditis elegans
40
01/07/2017
-
ENA
38
-
Transcription profiling by high throughput sequencing of murine small intestinal epithelial cells stimulated with interleukin-28A
RNA-seq of coding RNA
Mus musculus
8
01/07/2017
-
ENA
29
-
Transcription profiling by array of human osteosarcoma cell line U2OS treated with ZM447439 (an aurora kinase inhibitor) or SB202190 (a p38 inhibitor)
transcription profiling by array
Homo_sapiens
4
01/07/2017
17
-
Time-course of bone marrow macrophages infected with Listeria monocytogenes in the presence or absence of IFNgamma
transcription profiling by array
Mus musculus
40
30/06/2017
-
12
-
Comparative microarrays of Actinoplanes sp. SE50/110 ΔacrA with the Actinoplanes sp. SE50/110 wildtype
transcription profiling by array
Actinoplanes sp. SE50/110
4
30/06/2017
-
12
-
RNAseq analysis of CD4 and CD8 T cells in response to vaccinia virus infection
RNA-seq of coding RNA
Mus musculus
12
30/06/2017
ENA
38
-
Transcriptional profiling of human breast tumor samples before and after treatment with chemotherapy with and without bevacizumab
transcription profiling by array
Homo sapiens
358
30/06/2017
80
-
Transcription profiling of human multiple myeloma cells after knockdown of EphA3
transcription profiling by array
Homo sapiens
4
30/06/2017
330
-
Transcription profiling by array of MCF7 cell lines silenced with TRAP1 small interfering RNA compared with scrambled RNA control
transcription profiling by array
Homo sapiens
6
30/06/2017
21
-
Expression profile of microRNAs in human follicular lymphoma (FL), reactive lymph nodes (rLN) and pure T cells
microRNA profiling by array
Homo sapiens
42
29/06/2017
-
50
-
ChIP-Seq of Gabpa in male C57Bl/6 mice liver
ChIP-seq
Mus musculus
5
29/06/2017
-
ENA
32
-
Histone H3K9me3 ChIP-seq of young adult C. elegans wildtype, and mutants emb-4 (qm31) and hrde-1 (tm1200)
ChIP-seq
Caenorhabditis elegans
20
29/06/2017
-
ENA
23
-
RNA-seq of wild-type Salmonella Typhimurium SL1344 and its AcrB D408A mutant
RNA-seq of coding RNA
Salmonella enterica subsp. enterica serovar Typhimurium str. SL1344
6
29/06/2017
ENA
24
-
Analysis of post-transcriptional RNA modifications in Caenorhabditis elegans under stress
RNA-seq of non coding RNA
Caenorhabditis elegans
9
29/06/2017
-
ENA
12
-
Acquired TET2 mutation-linked clonal hematopoiesis in FPD/AML patient led to the development of pre-leukemic clone resulting independently in T2-ALL and AML-M0
comparative genomic hybridization by array
Homo sapiens
2
29/06/2017
-
20
-
Transcriptome profiling of glioblastoma tissues and peritumoral regions by Serial Analysis of Gene Expression
transcription profiling by SAGE
Homo sapiens
27
29/06/2017
-
ENA
31
-
Finding new Chimeric RNAs in RNA-seq data, a test study in Acute Myeloid Leukemia patient cells
RNA-seq of coding RNA
Homo sapiens
3
28/06/2017
-
ENA
66
-
Transcription profiling by array of left ventricular papillary muscles from rats with diabetic cardiomyopathy and healthy controls treated with atorvastatin or vehicle control for 15 days
transcription profiling by array
Rattus norvegicus
12
27/06/2017
-
24
-
Transcription changes at sub-optimal root temperature in different grafting combinations of tomato rootstocks and scions
transcription profiling by array
Solanum habrochaites, Solanum lycopersicum
24
27/06/2017
-
24
-
Methylome profiling of human glioblastoma using Illumina 450K microarrays for the GlioTeX panel
methylation profiling by array
Homo sapiens
10
24/06/2017
-
54
-
Transcription profiling by array of mouse primary myoblasts constitutively expressing Hippo pathway downstream effectors Yap or Taz against empty vector controls
transcription profiling by array
Mus musculus
18
20/06/2017
55
-
Transcription profiling by array of Bacillus amyloliquefaciens FZB42 wildtype and sigD- mutants grown in media supplemented with soil extract
transcription profiling by array
Bacillus amyloliquefaciens
6
20/06/2017
29
-
Microarray analysis of abiotic stress responses in Arabidopsis thaliana rosette leaf tissue of Col-0 wild type plants and double/triple knockout mutants of aquaporins (pip2;1 pip2;2 and pip2;1 pip2;2 pip2;4)
transcription profiling by array
Arabidopsis thaliana
135
20/06/2017
71
-
Transcriptional profiling by array of chronic myeloid leukaemia (CML) stem/progenitor cells (CD34+38-) treated with tyrosine kinase inhibitors (imatinib, dasatinib and nilotinib) at different time points (8 hours and 7 days) against untreated controls
transcription profiling by array
Homo sapiens
49
20/06/2017
-
83
-
Transcriptional profiling of the developmental gene whiH deletion mutant of Streptomyces venezuelae ATCC 10712 at 7 time points from 8 to 20 hours of growth
transcription profiling by array
Streptomyces venezuelae
42
19/06/2017
26
-
RNA-seq of Hutchinson-Gilford progeria syndrome cells treated with proteasome inhibitor MG132
RNA-seq of coding RNA
Homo sapiens
2
18/06/2017
-
ENA
50
-
AtPRMT5 regulates shoot regeneration through modulating multiple genes expression analyzed by RNA-seq
RNA-seq of coding RNA
Arabidopsis thaliana
6
18/06/2017
ENA
39
-
Genes induced by HERV-K virus retroviral envelop
transcription profiling by array
Homo sapiens
8
17/06/2017
-
49
-
Expression array of RKO colorectal cancer cells resistant to irinotecan (CPT-11)
transcription profiling by array
Homo sapiens
3
17/06/2017
-
60
-
Microarray transcription analysis of MDS/MPN leukocyte samples with and without EZH2 mutations (n = 12, each) and EZH2-downregulated F-36P, MOLM-13 and OCI-M2 cell lines, using 2 shRNAs targeting EZH2 and a non-targeting control shRNA, each
transcription profiling by array
Homo sapiens
60
15/06/2017
-
81
-
Dynamic regulation of VEGF-inducible genes by an ERK-ERG-p300 transcriptional network
transcription profiling by array
Homo sapiens
14
15/06/2017
-
41
-
ChIP-seq of ERG-bound regulatory elements in human and bovine vascular endothelial cells
ChIP-seq
Bos taurus, Homo sapiens
10
15/06/2017
-
ENA
74
-
Elevated growth temperature in procyclic form of Trypanosoma brucei
RNA-seq of coding RNA
Trypanosoma brucei
6
15/06/2017
-
ENA
19
-
RNA-seq of in vitro-generated murine T helper 17 cells
RNA-seq of coding RNA
Mus musculus
8
14/06/2017
ENA
45
-
Transcription profiling by array of 4T1 murine breast carcinoma cells and derived cell lines resistant to photodynamic therapy induced by novel porphyrin-based photosensitizers and temoporfin
transcription profiling by array
Mus musculus
13
14/06/2017
-
38
-
RNA-seq of ppp1r13l knockdown in neonatal mice cardiomyocytes and lipopolysaccharide stimulation kinetics transcriptome
RNA-seq of coding RNA
Mus musculus
12
13/06/2017
ENA
60
-
RNA-seq of BALB/cJ‐Ppp1r13lwa3/J (wa3) mouse hearts vs BALB/C wildtype mice aged 7 weeks and 12 weeks mice, as well as lipopolysaccharide treatment for 12-week-old mice
RNA-seq of coding RNA
Mus musculus
12
13/06/2017
-
ENA
24
-
Mutations in ACTRT1 and its transcribed non-coding elements lead to aberrant activation of the Hedgehog signaling pathway in inherited and sporadic basal cell carcinomas
transcription profiling by array
Homo sapiens
5
12/06/2017
-
51
-
p63 spatio-temporal control of cleft palate
transcription profiling by array
Mus musculus
8
12/06/2017
25
-
Transcription profiling by RNA-Seq mouse embryos
RNA-seq of coding RNA
Mus musculus
5
12/06/2017
ENA
62
-
Microarray analysis of palatal shelves from wild-type versus p63-null mouse embryos
transcription profiling by array
Mus musculus
6
12/06/2017
31
-
Transcription profiling by array of neonatal and children dermal fibroblasts isolated from cleft lip and adult dermal fibroblasts of breast and face
transcription profiling by array
Homo sapiens
93
11/06/2017
104
-
Transcription profiling by array of reproductive tissues from female Cynomolgus macaques ( Macaca fascicularis ) after systemic vaccination with a modified vaccinia virus Ankara (MVA)-HIVB
transcription profiling by array
Macaca fascicularis
18
09/06/2017
-
27
-
Transcriptome Analysis of Preinvasive and Invasive Early Squamous Carcinoma in Archival Laser Microdissected Samples
transcription profiling by array
Homo sapiens
60
09/06/2017
97
-
ChIP-seq data of Jun target genes and the control in zebrafish embryos
ChIP-seq
Danio rerio
8
08/06/2017
-
ENA
48
-
Global expression profiling time series of early human embryonic stem cell differentiation towards the mesoderm lineage
transcription profiling by array
Homo sapiens
33
08/06/2017
-
83
-
Transcriptome analysis of self-renewing human pancreatic progenitors derived from pluripotent stem cells
RNA-seq of coding RNA
Homo sapiens
9
06/06/2017
-
ENA
97
-
RNA-seq of Medicago truncatula A17 and the ethylene insensitive sickle mutant interacting with the fungal root pathogen, Rhizoctonia solani AG8
RNA-seq of coding RNA
Medicago truncatula
24
06/06/2017
ENA
34
-
EPO-regulated targets in E1, E2, and E3 erythroid progenitors
transcription profiling by array
Mus musculus
20
06/06/2017
32
-
miRNA expression profiles in fresh frozen and formalin-fixed paraffin embedded tonsillar tumors
transcription profiling by RT-PCR
Homo sapiens
30
06/06/2017
-
45
-
RNA-seq of high lipid producing Yarrowia lipolytica during nitrogen or carbon restriction (control strain)
RNA-seq of coding RNA
Yarrowia lipolytica
6
06/06/2017
-
ENA
41
-
Identifying crossover locations in Arabidopsis thaliana CMT3-11 (Col) x CMT3-7 (Ler) F2 and wild type Col x Ler F2 populations using genotyping by sequencing
genotyping by high throughput sequencing
Arabidopsis thaliana
555
05/06/2017
-
ENA
102
-
Nucleosome-depleted DNA transposons act as enhancers of meiotic recombination at Arabidopsis genes (RNA-seq)
RNA-seq of coding RNA
Arabidopsis thaliana
2
05/06/2017
-
ENA
33
-
Meiotic recombination initiation hotspots in Arabidopsis genes and transposons (H3K4m3 ChIP-seq)
ChIP-seq
Arabidopsis thaliana
9
05/06/2017
-
ENA
28
-
Meiotic recombination initiation hotspots in Arabidopsis genes and transposons (MNase-seq)
MNase-seq
Arabidopsis thaliana
3
05/06/2017
-
ENA
34
-
Meiotic recombination initiation hotspots in Arabidopsis genes and transposons (SPO11-1-oligonucleotides-seq)
DNA-seq
Arabidopsis thaliana
10
05/06/2017
-
ENA
46
-
Transcription profiling of dermal fibroblasts subjected to different fluid flow rates
transcription profiling by array
Homo sapiens
9
05/06/2017
-
41
-
Tissue and developmental atlas of Brachypodium distachyon
transcription profiling by array
Brachypodium distachyon
117
03/06/2017
-
29
-
Genome-wide gene expression analysis of MDA-MB-468 human breast cancer cells treated with PLA2G7 shRNA
transcription profiling by array
Homo sapiens
6
02/06/2017
-
48
-
Genome-wide gene expression analysis of MDA-MB-468 human breast cancer cells treated with PLA2G7 siRNA
transcription profiling by array
Homo sapiens
4
02/06/2017
-
40
-
Analysis of cardiovirus and infected host-cell gene expression through RNA sequencing and ribosome profiling
translation profiling, RNA-seq of coding RNA
Mus musculus
20
02/06/2017
-
ENA
55
-
Analysis of undifferentiated hiPSC and differentiation into intermediate mesoderm of cells from patients carrying a heterozygous mutation in the SAMD9 gene
transcription profiling by array
Homo sapiens
10
02/06/2017
-
36
-
Genome-wide analysis of somatic copy number alterations and chromosomal breakages in osteosarcoma
genotyping by array
Homo sapiens
160
02/06/2017
-
75
-
Transcription profiling by high throughput sequencing of pancreatic beta cells from wild type and Abcc8 knockout mice
RNA-seq of coding RNA
Mus musculus
8
02/06/2017
-
ENA
34
-
ATAC-seq on endocardial cells from E12.5 mouse hearts in Tbx20 knockouts and wild type counterparts
ATAC-seq
Mus musculus
4
02/06/2017
ENA
206
-
Deciphering the relationship between polycomb repression and stochastic gene expression from single-cell RNA-seq data
RNA-seq of coding RNA from single cells
Mus musculus
288
01/06/2017
-
ENA
57
-
Microarray analysis of leaves of Arabidopsis thaliana Col-0 plants exposed to volatile pinenes (treatment) or hexane (control)
transcription profiling by array
Arabidopsis thaliana
8
01/06/2017
33
-
Effect of elevated c-di-GMP in Sinorhizobium meliloti
transcription profiling by array
Sinorhizobium meliloti
4
01/06/2017
23
-
Fip1 iCLIP-seq in Hela cells without treatment or treated with negative control anti-sense oligos (ASO) or snoRD50a ASO to study how snoRD50a affects Fip1/RNA interaction in mRNA 3' processing
CLIP-seq
Homo sapiens
6
01/06/2017
-
ENA
21
-
RNA-biotin based pull down assay with polyA site (PAS) RNA substrates in Hela Nuclear Extract followed by RNA-seq to discover trans-acting RNA molecules involved in mRNA 3 processing
RIP-seq
Homo sapiens
4
01/06/2017
-
ENA
21
-
The epigenetic modifier Fam208a is required to maintain epiblast cell potency
transcription profiling by array
Mus musculus
12
01/06/2017
-
43
-
PBMCs from stage IV melanoma patients after vaccination with melanoma-targeted mature dendritic cells (mDCs)
transcription profiling by array
Homo sapiens
142
01/06/2017
36
-
Comparing effects of inhibition of activin receptor type IIB (ActRIIB), myostatin (GDF8) and/or activinA in mouse muscle
RNA-seq of coding RNA
Mus musculus
34
01/06/2017
ENA
25
-
Lipidomic and Metabolic Changes in the P4-type ATPase ATP10D deficient C57BL/6J Wild Type Mice upon Rescue of ATP10D Function
transcription profiling by array
Mus musculus
8
01/06/2017
-
19
-
Transcriptomic responses of three-spined stickleback (Gasterosteus aculeatus) from Aire and Siblyback populations to ethinyl-estradiol, copper and binary mixtures
transcription profiling by array
Gasterosteus aculeatus
120
01/06/2017
-
18
-
Transcriptomic profiles of the acetogen Clostridium ljungdahlii during lithoautotrophic growth with syngas or with H2 and CO2 compared to organoheterotrophic growth with fructose
transcription profiling by array
Clostridium ljungdahlii
12
01/06/2017
20
-
RNA-seq of RNA endocleavage sites after siRNA knock-down of XRN1 or SMG
RNA-seq of coding RNA
Homo sapiens
3
01/06/2017
-
ENA
25
-
RNA-seq of human foetal foreskin fibroblasts 2 (HFFF2) treated with 2ng/ml TGF-beta-1 to induce myofibroblast differentiation or 10Gy gamma irradiation to induce senescence
RNA-seq of coding RNA
Homo sapiens
9
01/06/2017
-
ENA
64
-
Gene Expression Patterns in Potato Roots Associated with Greater Plant Growth at Low Phosphate Concentrations in the Rhizosphere
transcription profiling by array
Solanum tuberosum
24
01/06/2017
-
25
-
MicroRNA analysis during serum starvation of primary Human Foreskin Fibroblast cells
microRNA profiling by array
Homo sapiens
4
01/06/2017
24
-
Transcription profiling by array of human MDA-MB231-luc2 cells treated with TGFbeta2 and ST247
transcription profiling by array
Homo_sapiens
4
01/06/2017
14
-
Transcription profiling of pancreata from Ptf1a-Cre;LSL-KrasG12D and Ptf1a-Cre;LSL-KrasG12D;RelAfl/fl mice
transcription profiling by array
Mus musculus
6
01/06/2017
21
-
Gene expression profiling of liver from C57BLKS/J and db/db 8 mice with an AAV harboring a control or GAbpa-specific miRNA under the LP1 promoter
transcription profiling by array
Mus musculus
24
31/05/2017
-
21
An oil containing EPA and DHA from transgenic Camelina sativa to replace marine fish oil in feeds for Atlantic salmon (Salmo salar L.)
transcription profiling by array
Salmo salar
36
31/05/2017
-
15
-
Assessing the reliability of spike-in normalization for analyses of single-cell RNA sequencing data
RNA-seq of coding RNA from single cells
Mus musculus
384
31/05/2017
ENA
34
-
Microarray examination of liver tissue from mice fed 58% saturated high fat diet to induce hepatic steatosis
transcription profiling by array
Mus musculus
12
31/05/2017
-
19
-
polyA site sequencing (PAS-seq) analysis of Hela cells treated with NC ASO or snoRD50a ASOs
RNA-seq of coding RNA
Homo sapiens
6
31/05/2017
-
ENA
20
-
RNA-seq of human cell line HeLa after depletion of a lncRNA with three different loss-of-function methods
RNA-seq of coding RNA
Homo sapiens
653
31/05/2017
ENA
19
-
Multiomics of tomato glandular trichomes reveals distinct features of central carbon metabolism supporting high productivity of specialized metabolites
transcription profiling by array
Solanum habrochaites, Solanum lycopersicum
12
31/05/2017
25
-
Cymodocea nodosa response to simulated CO2-driven ocean acidification
RNA-seq of coding RNA
Cymodocea nodosa
9
31/05/2017
ENA
15
-
Transcriptome profiling of contrasting rice genotypes in response to submergence during seed germination
RNA-seq of coding RNA
Oryza sativa
12
31/05/2017
-
ENA
88
-
Gene expression profiling in control, heat-shock, and recovery treatment in a RIL population of Caenorhabditis elegans L4 larvae
transcription profiling by array
Caenorhabditis elegans
84
30/05/2017
-
25
-
Transcriptome analysis of neuromuscular junction during degeneration and regeneration of axon terminal
RNA-seq of coding RNA
Mus musculus
12
30/05/2017
-
ENA
57
-
Transcription profiling by array of eight pairs of closely related strains using pair-wise two-colour microarray analysis
transcription profiling by array
Schizosaccharomyces pombe
8
30/05/2017
-
25
-
Transcriptomic response of tomato (Solanum lycopersicum) plants to ammonium toxicity at elevated CO2 conditions
transcription profiling by array
Solanum lycopersicum
12
29/05/2017
45
-
Transcriptional profiling by array of uropathogenic Escherichia coli (UPEC) strain grown in urine/Luria bertani medium culture in vitro as well as during three distinct phases of UPEC bladder infection
transcription profiling by array
Escherichia coli UTI89
15
28/05/2017
-
28
-
Microarray comparing maternal peripheral blood effector T cells to decidual effector T cells
transcription profiling by array
Homo sapiens
24
26/05/2017
-
80
-
Insights into the prevalence and underlying causes of clonal variation through transcriptomic analysis in Pichia pastoris
transcription profiling by array
Komagataella pastoris
30
26/05/2017
-
26
-
RNA-seq of E10.5 limb mesenchymal cells from mice with mutations in Mycn and mir17-92
RNA-seq of coding RNA
Mus musculus
12
24/05/2017
-
ENA
57
Physcomitrella patens Reute development
transcription profiling by array
Physcomitrella patens
10
24/05/2017
-
33
-
Maternal folate depletion during early development and high fat feeding from weaning elicit similar changes in gene expression, but not in DNA methylation, in adult offspring (DNA methylation data)
methylation profiling by array
Mus musculus
48
22/05/2017
48
-
Maternal folate depletion during early development and high fat feeding from weaning elicit similar changes in gene expression, but not in DNA methylation, in adult offspring (Gene expression data)
transcription profiling by array
Mus musculus
24
22/05/2017
27
-
Identification of ETO2-GLIS2 targets by ChIP-sequencing
ChIP-seq
Homo sapiens
27
22/05/2017
-
ENA
53
-
Temporal Transcriptional Profiling in response to cMYC and Her2/NEU Expression and Inactivation in In Vitro Cultured Primary Mammary Epithelial Cells of Adult Virgin Mice
transcription profiling by array
Mus musculus
9
22/05/2017
-
59
-
Temporal Transcriptional Profiling in response to cMYC and KrasG12D Expression and Inactivation in In Vitro Cultured Primary Mammary Epithelial Cells of Adult Virgin Mice
transcription profiling by array
Mus musculus
9
22/05/2017
-
59
-
RNAseq of Volvox carteri somatic cells and mature reproductive cells
RNA-seq of coding RNA
Volvox carteri
6
21/05/2017
-
ENA
49
-
Transcriptomes and differential gene expression at the Arabidopsis shoot meristem during flowering
RNA-seq of coding RNA
Arabidopsis thaliana
16
21/05/2017
-
ENA
138
Chromatin states in the Arabidopsis shoot apical meristem
ChIP-seq
Arabidopsis thaliana
24
21/05/2017
-
ENA
69
-
Chromatin states in the Arabidopsis seedlings
ChIP-seq
Arabidopsis thaliana
6
21/05/2017
-
ENA
72
-
RNA Seq of hematopoietic stem and progenitor cells
RNA-seq of coding RNA
Mus musculus
9
18/05/2017
ENA
133
-
The Global Molecular Landscape of dormant Hematopoietic Stem Cells
RNA-seq of coding RNA from single cells
Mus musculus
384
18/05/2017
ENA
106
-
Time-Resolved Proteomics Extends Ribosome Profiling-Based Measurements of Protein Synthesis Dynamics
other, RNA-seq of coding RNA
Homo sapiens
12
18/05/2017
-
-
54
-
Time series of gene expression profiles describing the temporal response to prolonged heat stress in C. elegans
transcription profiling by array
Caenorhabditis elegans
36
17/05/2017
42
-
Transcription profiling of Physcomitrella patens reproductive organs from wt and Ppglr1/2 knock out samples
transcription profiling by array
Physcomitrella patens
6
17/05/2017
55
-
YAP regulates cell mechanics by controlling focal adhesion assembly
ChIP-seq
Homo sapiens
5
17/05/2017
-
ENA
63
-
The Rhizoctonia solani transcriptome during interaction with the host plant Lactuca sativa
RNA-seq of coding RNA
Rhizoctonia solani
36
17/05/2017
-
ENA
53
-
INTS8 mutations cause severe neurodevelopmental syndrome
RNA-seq of coding RNA
Homo sapiens
4
17/05/2017
ENA
39
-
Analysis of paired primary and metastatic cell lines identifies common DNA methylation changes in melanoma metastasis
methylation profiling by high throughput sequencing
Homo sapiens
7
17/05/2017
-
59
-
Gene expression profiling in Abatacept treated Rheumatoid Arthritis patients according to response
transcription profiling by array
Homo sapiens
36
17/05/2017
117
-
Gene expression profiles of TIE2 expressing Monocytes (TEMs)
transcription profiling by array
Homo sapiens
6
17/05/2017
33
-
DNA microarray analysis using murine cerebellum at P6
transcription profiling by array
Mus musculus
2
16/05/2017
65
-
RNAseq experiment of non-exposed skin, Actinic Keratosis, Intraepdimeral Carcinoma and Squamous Cell Carcinoma
RNA-seq of coding RNA
Homo sapiens
29
16/05/2017
-
ENA
247
-
Microarray for transcript expression comparison of normal and Sox18 dominant negative dermal spheres
transcription profiling by array
Mus musculus
6
16/05/2017
-
63
-
Immune response eQTL study in primary human monocytes stimulated with multiple microbial ligands under multiple time points
transcription profiling by array
Homo sapiens
938
16/05/2017
-
107
-
RNA-SEQ assay for wild type and CRISPR induced endoglin knockout human pulmonary artery smooth muscle cells (PASMC)
RNA-seq of coding RNA
Homo sapiens
6
16/05/2017
-
ENA
22
-
Gata6 network regulates epidermal junctional zone cell fate
ChIP-seq, transcription profiling by array
Mus musculus
31
16/05/2017
25
-
Genome-wide maps of Gata6 in primary mouse keratinocytes
ChIP-seq
Mus musculus
4
16/05/2017
-
-
27
-
Gene expression signature of Gata6 positive epidermal cells
transcription profiling by array
Mus musculus
12
16/05/2017
25
-
Gene expression signature of the three major epidermal differentiation compartments: interfollicular epidermis (IFE), hair follicle (HF) and sebaceous gland (SG)
transcription profiling by array
Mus musculus
9
16/05/2017
26
-
Epidermal overexpression of ∆NLef1 leads to deregulation of epidermal stem cell fate
transcription profiling by array
Mus musculus
6
16/05/2017
23
-
Comparative gene expression profiling of serum-free and FBS treated adherent primary pancreatic TIC cultures
transcription profiling by array
Homo sapiens
16
16/05/2017
-
25
-
Epigenetic regulation and transcriptional repression by Tet1 in the early post-implantation mouse embryo: WG Bisulfite sequencing
Bisulfite-seq
Mus musculus
8
15/05/2017
ENA
82
-
Epigenetic regulation and transcriptional repression by Tet1 in the early post-implantation mouse embryo: ChIP seq
ChIP-seq
Mus musculus
12
15/05/2017
-
ENA
97
-
Transcription profiling of HEK293 cells expressing YAP1, RASSF1A or both to study the effect of RASSF1A on YAP signalling in the HIPPO pathway
transcription profiling by array
Homo sapiens
4
15/05/2017
-
66
-
Expression RNA-Seq data of matched cases of pre-treatment Fine-needle aspiration (FNA) and the respective post neo-adjuvant treatment operative sample of breast cancer patients
RNA-seq of coding RNA
Homo sapiens
14
15/05/2017
ENA
180
-
Epigenetic regulation and transcriptional repression by Tet1 in the early post-implantation mouse embryo: Methylation data
methylation profiling by high throughput sequencing
Mus musculus
44
15/05/2017
-
ENA
103
-
Lineage-specific functions of TET1 in the post-implantation mouse embryo.: RNA-Seq of in vitro converted primed epiblast-like cells
RNA-seq of coding RNA
Mus musculus
15
15/05/2017
-
ENA
129
-
Comparative genomic hybridization by array of 51 Diffuse Large B-cell Lymphomas against a common pool of reference DNA from healthy individuals to identify recurrent copy number events in this disease
comparative genomic hybridization by array
Homo sapiens
51
15/05/2017
90
-
Comparative genomic hybridization by array of 18 treatment-refractory Diffuse Large B-cell Lymphomas against a common reference pool of DNA from healthy individuals to identify copy number events that could predict the relapse
comparative genomic hybridization by array
Homo sapiens
18
15/05/2017
64
-
Comparative genomic hybridization by array of 38 Diffuse Large B-Cell lymphomas against matched blood samples to identify recurrent copy number events
comparative genomic hybridization by array
Homo sapiens
38
15/05/2017
71
-
RNA-seq transcriptional profiling in human primary fetal and adult CD34+ hematopoietic stem/progenitor cells (HSPCs) erythroid progenitor cells (ProEs)
RNA-seq of coding RNA
Homo sapiens
16
15/05/2017
-
ENA
42
-
Lineage-specific functions of TET1 in the post-implantation mouse embryo
RNA-seq of coding RNA
Mus musculus
23
15/05/2017
-
ENA
24
-
Adipocyte-derived Exosomal miRNAs from Subcutaneous Adipose Tissue: A Novel Mechanism for Obesity-Related Disease
transcription profiling by array
Homo sapiens
12
15/05/2017
18
-
Fgf18 regulates hair cycle
transcription profiling by array
Mus musculus
4
15/05/2017
14
-
FGF18 affects hair cycle
transcription profiling by array
Mus musculus
2
15/05/2017
14
-
Transcription profiling by RNA-seq of Arabidopsis treated with the Strobilurin kresoxim-methyl to study the effect on leaf growth
RNA-seq of coding RNA
Arabidopsis thaliana
6
13/05/2017
-
ENA
76
-
Genome-wide identification of bZIP29 target genes in Arabidopsis cell cultures
ChIP-seq
Arabidopsis thaliana
3
13/05/2017
ENA
137
-
Skeletal muscle gene expression in the wild type and the GAA knock-out mice, a model of Pompe disease
RNA-seq of coding RNA
Mus musculus
9
13/05/2017
-
-
14
-
Bacterial endosymbionts control host sexuality and reveal reproductive genes of early divergent fungi
RNA-seq of coding RNA
Rhizopus microsporus
12
13/05/2017
-
-
14
-
The male determining M-factor of the global disease vector Musca domestica is a paralog of the generic splice factor CWC22
RNA-seq of coding RNA
Musca domestica
4
12/05/2017
-
ENA
84
-
Expression Profiling of Term Placenta in Viviparous Mammals by RNA-Seq
RNA-seq of coding RNA
Ateles fusciceps, Bos taurus, Canis lupus familiaris, Dasypus novemcinctus, Loxodonta africana, Monodelphis domestica, Mus musculus, Pan paniscus
8
12/05/2017
ENA
26
-
Expression profiling in cellular miRNAs of human bone marrow stromal cells
other
Homo sapiens
6
12/05/2017
-
18
-
Expression profiling in exosomal miRNAs secreted from human bone marrow stromal cells
other
Homo sapiens
6
12/05/2017
-
16
-
The gene expression profiles of human bone marrow stromal cells
transcription profiling by array
Homo sapiens
6
12/05/2017
41
-
The role of PCNA ubiquitylation during unperturbed genome replication in S.pombe
other
Schizosaccharomyces pombe
14
12/05/2017
-
-
20
-
Cyflumetofen resistance in the two-spotted spider mite Tetranychus urticae
transcription profiling by array
Tetranychus urticae
4
12/05/2017
13
-
Rapid High-Resolution Functional Mapping of Yeast Genomes by Saturated Transposition
DNA-seq
Saccharomyces cerevisiae
7
11/05/2017
ENA
119
-
Influence of organic cultivation on potato transcriptome
transcription profiling by array
Solanum tuberosum
8
11/05/2017
94
-
Expression data from BIG LEAF
transcription profiling by array
Populus tremula x Populus alba
12
11/05/2017
68
-
Transcription profiling by array of chicken anterior wing buds treated with retinoic acid at stage HH20 and later harvested at stage HH24
transcription profiling by array
Gallus gallus
5
10/05/2017
82
-
Transcription profiling of DREB1A overexpressing vs wild type Arabidopsis plants
transcription profiling by array
Arabidopsis thaliana
4
10/05/2017
-
111
-
Gene expression in human basal, luminal, and stromal cell populations from benign prostatic hyperplasia tissues and comparisons with cultured basal cells
transcription profiling by array
Homo sapiens
11
09/05/2017
-
121
-
Transcriptome changes associated with relief of sly1-2 seed dormancy through after-ripening or overexpression of the gibberellin-receptor GID1b
transcription profiling by array
Arabidopsis thaliana
24
09/05/2017
103
-
Gene expression profiling of PANC1 and BXPC-3 pancreatic cells
transcription profiling by array
Homo sapiens
4
09/05/2017
162
-
In vitro experiment, aquaous extract (AE), Total particulate matter (TPM) and gas-vapor phase (GVP) on NHBE cells
transcription profiling by array
Homo sapiens
30
05/05/2017
133
-
Transcription profiling by array of acute megakaryoblastic leukemia fusion oncogene expressing human HEL and MO7E cells
transcription profiling by array
Homo sapiens
26
05/05/2017
142
-
Ageing liver RNAseq of C57BL/6 male mice in dietary restricted and an ad libitum diets
RNA-seq of coding RNA
Mus musculus
12
04/05/2017
-
ENA
149
-
RNA sequencing of tumor associated macrophages and T cells in clear cell renal cell carcinoma
RNA-seq of coding RNA
Homo sapiens
83
04/05/2017
ENA
716
-
Lineage-dependent spatial and functional organisation of the mammalian enteric nervous system
RNA-seq of coding RNA from single cells
Mus musculus
120
04/05/2017
-
ENA
210
-
Gene expression changes at the onset of sexual reproduction in the marine planktonic diatom Pseudo-nitzschia multistriata
RNA-seq of coding RNA
Pseudo-nitzschia multistriata
16
04/05/2017
-
ENA
103
-
MeDIP assay using human myometrium of women with preterm labor of different phenotypes vs. normal term labor
methylation profiling by array
Homo sapiens
6
04/05/2017
-
91
-
MeDIP and hMeDIP assays using human placentas of obese and lean (healthy weight) pregnancies
methylation profiling by array
Homo sapiens
4
04/05/2017
-
89
-
Integrative and comparative genomics identifies the tyrosine kinase FES as a key melanoma tumor supppressor: WGS part 2
DNA-seq
Mus musculus
11
03/05/2017
-
ENA
108
-
The microRNA-205 is correlated to metastatic potential of 21T series: a breast cancer progression model
transcription profiling by array
Homo sapiens
10
03/05/2017
-
152
-
RNA-seq of the Ileo-Caecal Valve Lymph Node of Sheep with Paratuberculosis Compared to Uninfected Controls
RNA-seq of coding RNA
Ovis aries
16
03/05/2017
-
ENA
108
-
Marine diatoms sense and respond to microscale turbulence in non-limiting nutrient conditions
RNA-seq of coding RNA
Chaetoceros decipiens
8
03/05/2017
-
ENA
100
-
Transcriptome profiling for wild-type, single and double mutants for Nuclear Factor YA1 (nf-ya1) and hypernodulation phenotype (har1) mutants in roots of Lotus japonicus
transcription profiling by array
Lotus japonicus
18
03/05/2017
-
97
-
Integrative and comparative genomics identifies the tyrosine kinase FES as a key melanoma tumor supppressor: WGS
DNA-seq
Mus musculus
68
03/05/2017
-
ENA
108
-
Integrative and comparative genomics identifies the tyrosine kinase FES as a key melanoma tumor supppressor: WES
DNA-seq
Mus musculus
23
03/05/2017
-
ENA
99
-
Condensin plays a role in both interphase nuclei and premature chromosome condensation
RNA-seq of coding RNA
Gallus gallus
5
03/05/2017
-
92
-
NPM1 mutation-modulated microRNA-mRNA regulation in acute myeloid leukemia
transcription profiling by array
Homo sapiens
218
03/05/2017
99
-
NPM1 mutation-modulated microRNA−mRNA regulation in acute myeloid leukemia [miRNA]
transcription profiling by array
Homo sapiens
109
03/05/2017
83
-
NPM1 mutation-modulated microRNA−mRNA regulation in acute myeloid leukemia [mRNA]
transcription profiling by array
Homo sapiens
109
03/05/2017
-
67
-
Genome wide STAT3 RNAi expression profiling data from Thp,Th0 and Th17 cells
transcription profiling by array
Homo sapiens
108
03/05/2017
60
-
Genome-wide detection of STAT3 binding sites in human Th17 cells
ChIP-seq
Homo sapiens
2
03/05/2017
-
-
57
-
Small RNA profiles of three different mycovirus-infected Aspergillus fumigatus isolates, created using Illumina high definition adapters
RNA-seq of non coding RNA
Aspergillus fumigatus
3
03/05/2017
-
-
47
-
RNA-seq of mouse astrocytes in monoculture and co-cultured with rat neurons (both inactive and active)
RNA-seq of coding RNA
Mus musculus, Rattus norvegicus, mixed sample
43
02/05/2017
-
ENA
99
-
Microarray analyses of C. albicans sak1 deletion mutant in complex liquid medium (YPD)
transcription profiling by array
Candida albicans
6
02/05/2017
-
68
-
Tyrosine 842 in the activation loop is required for full transformation by the oncogenic mutant FLT3-ITD
transcription profiling by array
Mus musculus
6
02/05/2017
-
66
-
Transcription profiling by array of the effects of exogenous lipid on differentiated THP-1 cells
transcription profiling by array
Homo sapiens
12
02/05/2017
-
63
-
Intra-macrophage Expression data of Francisella tularensis novicida U112
transcription profiling by array
Francisella tularensis subsp. novicida U112
3
02/05/2017
20
-
Integrated analysis of MLL-AF9 AML patients and model leukemias highlights RET and other novel therapeutic targets (Leukemia Cell Bank)
RNA-seq of coding RNA
Homo sapiens
3
02/05/2017
ENA
40
-
Integrated analysis of MLL-AF9 AML patients and model leukemias highlights RET and other novel therapeutic targets [RNA-Seq_normal]
RNA-seq of coding RNA
Homo sapiens
4
02/05/2017
ENA
51
-
Integrated analysis of MLL-AF9 AML patients and model leukemias highlights RET and other novel therapeutic targets [RNA-Seq_AML]
RNA-seq of coding RNA
Homo sapiens
4
02/05/2017
ENA
57
-
Integrative epigenomic analysis in MLL-AF9 acute myeloid leukemia (AML) and B-acute lymphoblastic leukemia (B-ALL)
methylation profiling by high throughput sequencing
Homo sapiens
9
02/05/2017
ENA
33
-
BBr003: Characterization of bovine embryos cultured under conditions appropriate for sustaining human naïve pluripotency
transcription profiling by array
Bos taurus
4
02/05/2017
22
-
Small RNA profiles of mycovirus-free and mycovirus-infected Aspergillus fumigatus isolates, created using ScriptMiner adapters
RNA-seq of coding RNA, RNA-seq of non coding RNA
Aspergillus fumigatus
16
02/05/2017
-
-
22
-
Isocaloric intake of diets differing in macronutrient content (high protein or high fat) in adult rats indicate adverse effects as analysed by hepatic transcriptomics
transcription profiling by array
Rattus norvegicus
19
02/05/2017
24
-
A DNA methylation atlas of the human eye and its diseases
methylation profiling by array
Homo sapiens
273
02/05/2017
-
61
-
Hes1 is responsible for Notch signaling-mediated suppression of acute myeloid leukemia development
transcription profiling by array
Mus musculus
4
02/05/2017
33
-
DNA-seq of differentially induced promoter regions in E. coli UTI89 strain grown in either J82 bladder epithelial cells, urine, DMEM or LB medium
DNA-seq
Escherichia coli UTI89
4
01/05/2017
-
ENA
71
-
Differential transcriptomic analysis reveals hidden light stress response in Streptomyces lividans TK24
RNA-seq of coding RNA
Streptomyces lividans
2
01/05/2017
-
ENA
98
-
Microarray analysis of gene expression in Phytophthora capsici over-expressing an NMRA-like protein (PcNMRAL1, Phyca11_505845) during a time course infection assay of tomato (Solanum lycopersicum) leaves
transcription profiling by array
Phytophthora capsici
24
01/05/2017
-
61
-
Whole-exome sequencing (WES) of single glands from opposite side of two colorectal tumors and WES of colorectal cancer xenografts derived from single cell culture to study tumor growth dynamics
DNA-seq
Homo sapiens
21
01/05/2017
-
-
143
-
Microarray transcriptomic profiling of patients with sepsis due to faecal peritonitis and pneumonia to identify shared and distinct aspects of the transcriptomic response (validation cohort)
transcription profiling by array
Homo sapiens
108
01/05/2017
107
-
Microarray transcriptomic profiling of patients with sepsis due to faecal peritonitis and pneumonia to identify shared and distinct aspects of the transcriptomic response (discovery cohort)
transcription profiling by array
Homo sapiens
237
01/05/2017
101
-
Abiotic stress-response reprogramming events underlie successful initiation of apomixis
RNA-seq of coding RNA
Boechera Stricta, Boechera gunnisoniana
2
01/05/2017
-
ENA
62
-
Transcription profiling by array of CD45+ lymphocytes from a xenograft model of induction therapy and relapse in pediatric acute lymphoblastic leukemia
transcription profiling by array
Homo sapiens
48
01/05/2017
-
82
-
iCLIP of TDP-43
CLIP-seq
Homo sapiens
2
01/05/2017
-
ENA
97
-
3'-end targeted sequencing of 6 control and 6 TDP-43 KD samples in HEK293
RNA-seq of coding RNA
Homo sapiens
12
01/05/2017
-
ENA
95
-
EphA3 silencing in Multiple Myeloma Endothelial Cells
transcription profiling by array
Homo sapiens
4
01/05/2017
74
-
Expression data of three sets of cells: (1) Schwann cells and macrophages from 1m-old WT DRG, (2) Schwann cells (Nf1-/-) and macrophages (Nf1+/+) from 1m-old neurofibroma, (3) Schwann cells (Nf1-/-) and macrophages (Nf1+/+) from 7m-old neurofibroma
transcription profiling by array
Mus musculus
23
01/05/2017
15
-
Postnatal monocyte maturation requires age-dependent initiation of regulatory gene programs when losing birth-associated stress tolerance
transcription profiling by array
Homo sapiens
12
01/05/2017
17
-
Gene transcription analysis of Daphnia magna multigenerations exposed to carbendazim
transcription profiling by array
Daphnia magna
12
01/05/2017
20
-
Viral Profiles in Sjogren's Syndrome
transcription profiling by array
Viruses
29
01/05/2017
34
-
Chromatin interactions involving super-enhancers associate with specific expression patterns of target genes
other
Homo sapiens
6
01/05/2017
ENA
27
-
RNA-Seq data for KRAS wild-type(WT) and two mutant forms G12V and Q61H over-expressed samples with green fluorescent protein control samples using human mammary epithelial cells
RNA-seq of coding RNA
Homo sapiens
36
01/05/2017
-
ENA
29
-
Acetyl-CoA metabolism by ACSS2 regulates neuronal histone acetylation and long-term memory
ChIP-seq, RNA-seq of coding RNA
Mus musculus
46
01/05/2017
-
26
-
Acetyl-CoA metabolism by ACSS2 regulates neuronal histone acetylation and long-term memory [RNA-seq]
RNA-seq of coding RNA
Mus musculus
16
01/05/2017
ENA
23
-
Acetyl-CoA metabolism by ACSS2 regulates neuronal histone acetylation and long-term memory [ChIP-seq]
ChIP-seq
Mus musculus
14
01/05/2017
-
ENA
23
-
Genome-wide maps of five major transcription factors in epiblast stem cells
ChIP-seq
Mus musculus
11
01/05/2017
ENA
24
-
degradome sequence data
RNA-seq of coding RNA
Glycine max
4
01/05/2017
ENA
35
-
Human TNBC Cells 72h Treatment with 45nM OTSSP167 MELK Inhibitor vs. DMSO Control (SUM159)
transcription profiling by array
Homo sapiens
2
01/05/2017
103
-
Human TNBC Cells 72h Treatment with 4.5nM OTSSP167 MELK Inhibitor vs. DMSO Control (SUM159)
transcription profiling by array
Homo sapiens
2
01/05/2017
34
-
Genome-wide effects of the maternal embryonic leucine zipper kinase (MELK) in triple-negative breast cancer cells indicate context-dependent effects and p53 as a key determinant
transcription profiling by array
Homo sapiens
10
01/05/2017
46
-
Human TNBC Cells 72h Treatment with 45nM OTSSP167 MELK Inhibitor vs. DMSO Control
transcription profiling by array
Homo sapiens
2
01/05/2017
31
-
Human TNBC Cells 72h Treatment with 4.5nM OTSSP167 MELK Inhibitor vs. DMSO Control
transcription profiling by array
Homo sapiens
2
01/05/2017
30
-
Human TNBC Cells 48h Treatment with OTSSP167 MELK Inhibitor vs. DMSO Control
transcription profiling by array
Homo sapiens
2
01/05/2017
25
-
Genome-wide maps of the total and lysine methylated enriched pools of peroxisome proliferating activated receptor gamma (pparg) co-activator 1 alpha (ppargc1a) in Hepa 1-6 cells
ChIP-seq
Mus musculus
3
01/05/2017
-
-
27
-
Transcriptome Analysis of Immunity- and Reproduction-related Differential Gene Expression in Parasitized Locusta migratoria
RNA-seq of coding RNA
Locusta migratoria
12
01/05/2017
-
23
-
Comparative expression of bone metastasis clones and its parental cells on Chinese lung adenocarcinoma cell line SPC-A-1 and human larger cell lung cancer cell line NCI-H460 by cDNA array
transcription profiling by array
Homo sapiens
3
01/05/2017
46
-
Genome-wide RNA-seq analysis during carbon catabolite repression in Trichoderma reesei reveals a multilevel control of cellulase production and action
RNA-seq of coding RNA
Trichoderma reesei
6
01/05/2017
-
-
21
-
Regulatory and evolutionary footprints of messenger RNA secondary structure in primate transcriptomes
other, RNA-seq of coding RNA, RNA-seq of non coding RNA
Homo sapiens, Macaca fascicularis, Macaca mulatta
22
01/05/2017
-
-
30
-
Cholesterol regulates DAF-16 nuclear localization and fasting-induced longevity in C. elegans
transcription profiling by array
Caenorhabditis elegans
8
01/05/2017
23
-
Histone H3 Ser10 phosphorylation in hpr1-101
ChIP-chip by tiling array
Saccharomyces cerevisiae
2
01/05/2017
-
20
-
Microarray analysis of mouse whole genome using self-amplifying messenger (SAM) RNA delivered with different formulations compared to controls
transcription profiling by array
Mus musculus
15
30/04/2017
-
48
RNA-Seq of ALDH positive, ALDH negative and unsorted cells from patient-derived 3D in-vitro models of colon cancer
RNA-seq of coding RNA
Homo sapiens
29
30/04/2017
-
ENA
102
-
Transcript analysis of Arabidopsis wild type and S-nitrosoglutathione reductase knock-out line (Wassilewskija)
transcription profiling by array
Arabidopsis thaliana
6
30/04/2017
-
51
-
Longitudinal and Diurnal Experiments of M. hapla and M. truncatula
RNA-seq of coding RNA
Medicago truncatula, Meloidogyne hapla, root metagenome
134
30/04/2017
-
ENA
128
-
miRNA profiling of the MV4-11 cell line treated with trabectidin or azacitidin
microRNA profiling by array
Homo sapiens
29
30/04/2017
48
-
GNS577_transcriptome
transcription profiling by array
Sinorhizobium meliloti
3
30/04/2017
49
-
Methylation profiling in predict recurrence hepatocellular carcinoma
methylation profiling by array
Homo sapiens
66
30/04/2017
-
45
-
Systematic identification of changes in the yeast protein interaction network in response to environmental, chemical, and genetic perturbation [transcriptome data]
transcription profiling by array
Saccharomyces cerevisiae
10
30/04/2017
43
-
Analysis of gene expression from fbn5-1 T-DNA insertion mutant of Arabidopsis
transcription profiling by array
Arabidopsis thaliana
8
30/04/2017
23
-
Expression data from prostate cancer cell lines
transcription profiling by array
Homo sapiens
4
30/04/2017
85
-
Expression data of sound vibration-treated Arabidopsis thaliana during Botrytis cinerea infection
transcription profiling by array
Arabidopsis thaliana
18
29/04/2017
-
135
-
Gene expression profile of melanoma cell lines after overexpression or knockdown of KPC1
RNA-seq of coding RNA
Homo sapiens
4
29/04/2017
-
-
31
-
Expression data in Arabidopsis Col-0 with acetic acid treatment and subsequent drought treatment
transcription profiling by array
Arabidopsis thaliana
27
29/04/2017
29
-
Expression data in Arabidopsis hda6 mutant axe1-5 and its parental line DR5 under drought and control conditions
transcription profiling by array
Arabidopsis thaliana
30
29/04/2017
25
-
SNP array in severe early-onset obesity
genotyping by array
Homo sapiens
157
28/04/2017
-
78
-
Primary human bone marrow-derived mesenchymal stem cells (MSCs) treated with TNFa ligand
transcription profiling by array
Homo sapiens
14
28/04/2017
-
56
-
Primary human bone marrow-derived mesenchymal stem cells (MSCs) treated with TGFb1 ligand
transcription profiling by array
Homo sapiens
14
28/04/2017
-
105
-
Molecular phenotyping of multiple mouse strains under metabolic challenge uncovers Elovl2 as a novel regulator of glucose-induced insulin secretion
RNA-seq of coding RNA
Mus musculus
338
28/04/2017
-
ENA
23
-
Transcriptional profiling of Regulatory T-cells isolated from adult skin and skin draining lymph nodes (SDLNs)
RNA-seq of coding RNA
Mus musculus
7
28/04/2017
-
ENA
23
-
Transcriptional profiling of hair follicle stem cells in the presence and absence of Regulatory T-cells
RNA-seq of coding RNA
Mus musculus
4
28/04/2017
-
ENA
22
-
Time-course expression data from HEK293∆RAF1:ER cells stimulated with 4OHT, U0126, CYHX, ActD, EGF, FGF, or IGF
transcription profiling by array
Homo sapiens
41
28/04/2017
28
-
C/EBPalpha regulated microRNA expression profiling in inducible K562-C/EBPalpha-ER cells
RNA-seq of non coding RNA
Homo sapiens
6
28/04/2017
ENA
27
-
Differentiation of human embryonic stem cells towards hepatocytes
RNA-seq of coding RNA
Homo sapiens
10
28/04/2017
-
-
53
-
G-CSF plus AMD3100 mobilization in adult patients with beta-thalassemia results in effective mobilization of CD34+ cells with primitive signatures
transcription profiling by array
Homo sapiens
4
28/04/2017
20
-
Mutant p53R273H regulated microRNA profiling in presence and absence of DNA damage in H1299 cells
RNA-seq of non coding RNA
Homo sapiens
8
28/04/2017
-
-
34
-
Transcription profiling of human coronary artery endothelial cells exposed to x-ray radiation - 1 day, 7 days, 14 days post-irradiation
transcription profiling by array
Homo sapiens
45
27/04/2017
-
66
-
Gene expression profiling after vaccination with the RTS,S candidate malaria vaccine in a controlled human malaria infection study
transcription profiling by array
Homo sapiens
302
27/04/2017
137
-
mRNA profiling in aortic stenosis
transcription profiling by array
Homo sapiens
20
27/04/2017
-
65
-
MicroRNA profiling in aortic stenosis
microRNA profiling by array
Homo sapiens
38
27/04/2017
-
63
-
Gene expression profile in IM-0223 cells transfected with KPC1 or control vector using RNA-seq
RNA-seq of coding RNA
Homo sapiens
4
27/04/2017
-
-
18
-
RNA-Seq of pancreatic islets from beta cell-specific Pax6 knockout mice
RNA-seq of coding RNA
Mus musculus
9
26/04/2017
-
ENA
85
A MILI-independent piRNA biogenesis pathway empowers partial germline reprogramming
Bisulfite-seq
Mus musculus
9
25/04/2017
-
ENA
78
-
Whole genome-wide expression profiles of hemp (Cannabis sativa L.) in response to drought stress
RNA-seq of coding RNA
Cannabis sativa
4
22/04/2017
-
77
-
Transcription profiling by array of the hippocampi of aged NGS mice treated with human plasma
transcription profiling by array
Mus musculus
28
21/04/2017
105
-
Examination of the role of BMP signaling in patterning of human pluripotent stem cell derived mid/hindgut spheroids and maintenance of this patterning in organoids transplanted under mouse kidney capsules
RNA-seq of coding RNA
Homo sapiens
24
20/04/2017
-
ENA
162
-
microArray analysis of miRNA expression of human esophageal cell samples and breast cell samples for comparison with multiplexed ligation-based miRNA detection assay
microRNA profiling by array
Homo sapiens
8
20/04/2017
-
155
-
DOT1L inhibition with EPZ-5676 in human articular chondrocytes from 5 non-OA hip fracture patients
transcription profiling by array
Homo sapiens
10
20/04/2017
75
-
Gene expression in neonatal NKT cells and lymphoma samples from mice with high E protein levels [Microarray Expression]
transcription profiling by array, unknown experiment type
Mus musculus
6
20/04/2017
62
-
The Sinorhizobium meliloti NfeR1-dependent transcriptome probed with Sm14kOLI microarrays
transcription profiling by array
Sinorhizobium meliloti
8
19/04/2017
-
104
-
Genome wide mapping of long range contacts unveils DNA Double Strand Breaks clustering at damaged active genes
DNA-seq
Homo sapiens
7
19/04/2017
-
ENA
126
-
Expression data from mouse brain tissue
transcription profiling by array
Mus musculus
28
19/04/2017
21
-
Gene expression profile of patients with moderate and severe chronic spontaneous urticaria
transcription profiling by array
Homo sapiens
61
19/04/2017
62
-
Gene expression profile of patients with moderate and severe chronic spontaneous urticaria [blood]
transcription profiling by array
Homo sapiens
30
19/04/2017
53
-
Gene expression profile of patients with moderate and severe chronic spontaneous urticaria [tissue]
transcription profiling by array
Homo sapiens
31
19/04/2017
48
-
Maize endosperm vp1 mutant response to water deficit
transcription profiling by array
Zea mays
12
19/04/2017
-
57
-
Comparison of global gene expression profiles of microdissected human foetal Leydig cells with their normal and hyperplastic adult equivalents
transcription profiling by array
Homo sapiens
12
18/04/2017
-
132
-
Expression data from young and senescent HCAECs treated with proton pump inhibitors (omeprazole and lansoprazole)
transcription profiling by array
Homo sapiens
18
18/04/2017
58
-
Comparative study of host response to chytridiomycosis in susceptible and resistant toad species
transcription profiling by array
Anaxyrus boreas, Rhinella marina
71
18/04/2017
47
-
Lamin A/C Is Required For ChAT-Dependent Neuroblastoma Differentiation: a microarray gene expression study
transcription profiling by array
Mus musculus
8
18/04/2017
47
-
Targeting MDM4/MDM2 binding interface for reactivation of p53 in cancer therapy
transcription profiling by array
Homo sapiens
24
18/04/2017
81
-
ChIP-seq of H1299 cells stably transfected with empty vector or the p53 mutant R273H
ChIP-seq
Homo sapiens
8
16/04/2017
-
ENA
186
-
RNA-seq of H1299 cells stably transfected with empty vector or the p53 mutant R273H
RNA-seq of coding RNA
Homo sapiens
4
16/04/2017
-
ENA
152
-
Affymetrix whole transcriptome gene expression analysis of ER-stressed Jurkat cells
transcription profiling by array
Homo sapiens
4
15/04/2017
115
-
RNA-seq of Streptococcus anginosus in a mono- and multispecies biofilm
RNA-seq of coding RNA
Streptococcus anginosus
6
14/04/2017
-
ENA
118
-
Microarray and transcript expression analysis of P. aeruginosa grown with or without bacterial (Delftia tsuruhatensis SJ01) extracts
transcription profiling by array
Pseudomonas aeruginosa PAO1
2
12/04/2017
-
65
-
Profiling Period 2 (PER2) mediated pathways following ischemic preconditioning (IPC) of the mouse heart using a genome array with 352 abundantly expressed and well-characterized micro RNAs
transcription profiling by RT-PCR
Mus musculus
3
12/04/2017
-
121
-
Time course Pho/dSfmbt Chromatin Immunoprecipitation on Drosophila melanogaster embryos during embryogenesis
ChIP-seq
Drosophila melanogaster
8
11/04/2017
-
ENA
135
-
Expression level of an industrial yeast strain producing isobutanol and wild-type
transcription profiling by array
Saccharomyces cerevisiae
6
10/04/2017
65
-
Use of clinical chromosomal microarray in Chinese patients with autism spectrum disorder - implications of a copy number variation involving dpp10 (Perkin Elmer CGX)
comparative genomic hybridization by array
Homo sapiens
1
07/04/2017
-
71
-
Use of clinical chromosomal microarray in Chinese patients with autism spectrum disorder - implications of a copy number variation involving dpp10 (CGX-12)
comparative genomic hybridization by array
Homo sapiens
9
07/04/2017
-
64
-
Transcriptomic profiling of chicken lung epithelial cells during low pathogenic avian influenza infection
transcription profiling by array
Gallus gallus
4
07/04/2017
-
177
-
Transcription profiling by array of wild-type and NCED3 mutant Arabidopsis plants under dehydration stress
transcription profiling by array
Arabidopsis thaliana
32
07/04/2017
-
198
-
In situ Hi-C study of chromatin conformation during early Drosophila development
Hi-C, ChIP-seq
Drosophila melanogaster
45
06/04/2017
ENA
550
-
Gene expression analysis of PDX1+ sub populations hESC-derived pancreatic endoderm cells and posterior foregut endoderm
transcription profiling by array
Homo sapiens
12
05/04/2017
-
195
-
Transcriptional profiling of antiestrogen-sensitive and -resistant MCF-7 cells
transcription profiling by array
Homo sapiens
20
05/04/2017
201
-
Changes in gene expression during G-CSF-induced emergency granulopoiesis in humans
transcription profiling by array
Homo sapiens
15
04/04/2017
-
261
-
Gene expression profiles of control versus Prdm16-overexpressing cells
transcription profiling by array
Mus musculus
2
03/04/2017
-
151
-
Digital Karyotyping for Detecting Chromosome Alterations
genotyping by array
Homo sapiens
12
03/04/2017
181
-
Transcription profiling by high throughput sequencing of Zika virus-infected human brain organoids
RNA-seq of coding RNA
Homo sapiens
6
03/04/2017
-
ENA
268
-
Transcription profiling by array of mouse embryonic jejunum explants treated with TGF-B1
transcription profiling by array
Mus musculus
12
03/04/2017
147
-
Transcription profiling by array of Magnaporthe oryzae wild type and Tpc1 mutant strains
transcription profiling by array
Magnaporthe oryzae 70-15
4
03/04/2017
146
-
Transcriptional responses in bovine skin during blood feeding of the cattle tick, Rhipicephalus microplus
transcription profiling by array
Bos indicus, Bos taurus
26
02/04/2017
-
136
-
Transcription profiling by array of human hematopoietic stem cells isolated from type 1 diabetes patients and healthy controls
transcription profiling by array
Homo sapiens
8
02/04/2017
-
200
-
Comparative systems toxicology analysis of cigarette smoke and aerosol from a candidate modified risk tobacco product in organotypic human gingival epithelial cultures: a 3-day repeated exposure study (miRNA data)
microRNA profiling by array
Homo sapiens
81
01/04/2017
144
-
Comparative systems toxicology analysis of cigarette smoke and aerosol from a candidate modified risk tobacco product in organotypic human gingival epithelial cultures: a 3-day repeated exposure study (mRNA data)
transcription profiling by array
Homo sapiens
81
01/04/2017
160
-
Protective vaccination induces differential miRNA expression in the liver of Balb/c mice during crisis of Plasmodium chabaudi blood-stage malaria
microRNA profiling by array
Mus musculus
30
01/04/2017
-
145
-
Microarray/gene expression analysis of RNA isolated with two different protocols from human blood sampled on PAXgene and Tempus
transcription profiling by array
Homo sapiens
87
01/04/2017
-
136
-
Microarray/gene expression analysis of RNA isolated with two different protocols from human blood sampled on PAXgene and Tempus
transcription profiling by array
Homo sapiens
19
01/04/2017
-
131
-
A transit amplifying population underpins the efficient regenerative capacity of the testis
transcription profiling by array
Mus musculus
8
01/04/2017
-
111
-
Genome-wide mRNA expression status of non-B non-C hepatocellular carcinoma assessed by SurePrint G3 Human GE 8x60K v2 Microarray (Agilent, USA)
transcription profiling by array
Homo sapiens
30
01/04/2017
-
181
-
Genome-wide microRNA expression status of non-B non-C hepatocellular carcinoma assessed by 3D-Gene Human miRNA Oligo Chip (Toray, Japan)
microRNA profiling by array
Homo sapiens
48
01/04/2017
-
157
-
Genome-wide DNA methylation status of non-B non-C hepatocellular carcinoma assessed by Infinium HumanMethylation450 BeadChip Kit (Illumina, USA)
methylation profiling by array
Homo sapiens
86
01/04/2017
-
159
-
The role of insulin resistance in experimental diabetic retinopathy - genetic and molecular aspects
transcription profiling by array
Rattus norvegicus
35
31/03/2017
-
213
-
GENCODE PCR-Seq Batch XVII
RNA-seq of coding RNA, RNA-seq of non coding RNA
Homo sapiens
32
31/03/2017
-
ENA
126
-
Transcriptome analyses of the impact of Hap5 transcription factor in the pathogenic yeast Candida glabrata
transcription profiling by array
Candida glabrata
6
31/03/2017
-
94
-
Transcriptome before and 10 min after valine induced isoleucine starvation in Escherichia coli K12 grown in minimal MOPS glucose medium at 37 C
RNA-seq of coding RNA, RNA-seq of non coding RNA
Escherichia coli K-12
2
31/03/2017
-
ENA
78
-
Brassica nigra challenged by Pieris brassicae, eggs of Pieris brassicae, Xanthomonas campestris pv. raphani, Brevicoryne brassicae or by combined stresses eggs of P. brassicae / P. brassicae, X. campestris / P. brassicae, B. brassicae / P. brassicae
transcription profiling by array
Brassica nigra
38
31/03/2017
-
84
-
Transcription profiling of T cells from healthy controls and patients with seasonal allergic rhinitis before and after one year of sublingual immunotherapy
transcription profiling by array
Homo sapiens
24
31/03/2017
-
100
-
EGR1 ChIP-seq targeted to Npy and its receptors
ChIP-seq
Mus musculus
2
30/03/2017
-
ENA
79
-
Gene expression profiles between mtROShigh and mtROSlow cells dissociated from E14.5 neocortical cells were compared by microarray
transcription profiling by array
Mus musculus
4
30/03/2017
-
60
-
microRNA profiling for prediction of chemoradiation efficacy in locally advanced head and neck squamous cell carcinoma
microRNA profiling by array
Homo sapiens
48
30/03/2017
-
119
-
Single cell RNA-sequencing of Spike-ins and mESC using Smart-Seq2 on C1 System
RNA-seq of coding RNA from single cells
Mus musculus
96
29/03/2017
-
ENA
116
-
Single cell RNA-sequencing of Spike-ins and mESC using Smart-Seq2 on C1 system (Replicate run)
RNA-seq of coding RNA from single cells
Mus musculus
61
29/03/2017
-
ENA
108
-
RNA-seq data from the trachea epithelial cells of two inbred chicken lines at three time points after challenge with lentogenic Newcastle disease virus
RNA-seq of coding RNA
Gallus gallus
48
29/03/2017
-
ENA
98
-
Single cell RNA-sequencing of Spike-ins and mESC using SMARTer on C1 System
RNA-seq of coding RNA from single cells
Mus musculus
96
28/03/2017
-
ENA
106
-
Antibody repertoire RNA-seq throughout key stages of mouse B-cell development (pre-B-cells, naive B cells, plasma cells)
RNA-seq of coding RNA
Mus musculus
71
28/03/2017
-
ENA
245
-
TSLPR expression marks a functionally discrete subset of human monocytes elicited by TLR4 activation
RNA-seq of coding RNA
Homo sapiens
6
28/03/2017
-
ENA
65
-
Genomic atlas of human adrenal and gonad development
transcription profiling by array
Homo sapiens
53
27/03/2017
-
165
-
RNA-seq of porcine peripheral whole blood from pig divergently selected for residual feed intake and treated with lipopolysaccharide
RNA-seq of coding RNA
Sus scrofa
32
24/03/2017
-
ENA
108
-
Comparative analysis of Bruno-3 gain of function in Drosophila larval muscles
comparative genomic hybridization by array
Drosophila melanogaster
3
24/03/2017
-
80
-
Transcription profiling by array of Arabidopsis roots infected with the cyst nematode H. schachtii
transcription profiling by array
Arabidopsis thaliana
6
23/03/2017
-
156
Transcription profiling by array of eight human Klinefelter syndrome patients (47,XXY) and eight human controls
transcription profiling by array
Homo sapiens
16
23/03/2017
-
89
-
Transcripton profiling by array of the cellular subpopulations that compose the hierarchy of normal human mammary epithelial cells
transcription profiling by array
Homo sapiens
20
23/03/2017
-
166
-
Transcription profiling by array of Arabidopsis roots treated with nematode aqueous diffusate (NemaWater)
transcription profiling by array
Arabidopsis thaliana
6
22/03/2017
-
116
Nanostring microRNA microarry analysis of p53 and Mdm2 knockout mouse hearts compared to vehicle-injected negative controls
microRNA profiling by array
Mus musculus
12
22/03/2017
-
135
-
Transcription profiling of wild type and Stella knockout oocytes, wild type and Stella maternal/zygotic knockout embryos to study to the role of Stella in early mouse development
RNA-seq of coding RNA
Mus musculus
66
22/03/2017
-
ENA
200
-
Retinoic acid mediated neural and mesoderm specification during vertebrate trunk development
RNA-seq of coding RNA from single cells
Mus musculus
539
22/03/2017
-
ENA
220
-
Gene expression analysis in mouse embryonic stem cells containing β-catenin lysine 49 to alanine mutation
transcription profiling by array
Mus musculus
12
21/03/2017
89
-
Single-cell RNA-sequencing resolves a CD4+ T cell fate bifurcation
RNA-seq of coding RNA from single cells
Mus musculus
1598
21/03/2017
-
ENA
475
Gene network analysis of interstitial macrophages after treatment with induced pluripotent stem cells secretome (iPSC-cm) in the bleomycin injured rat lung
transcription profiling by array
Rattus norvegicus
7
20/03/2017
-
108
Identification of Interferon Regulated Genes (IRGs) in the chicken lung and spleen
transcription profiling by array
Gallus gallus
32
20/03/2017
-
98
-
RNA-seq of Cellulophaga baltica phage 18:3 infection
RNA-seq of coding RNA
Cellulophaga baltica
36
20/03/2017
-
ENA
87
-
Transcription profiling by array of Anopheles gambiae: Tiassale following Maf-S knockdown by RNA interference
transcription profiling by array
Anopheles gambiae
5
19/03/2017
-
101
-
Methylation profiling by array of dentate gyrus in the rat model of long-term potentiation
methylation profiling by array
Rattus norvegicus
8
16/03/2017
-
151
-
RNA-Seq analysis of transcriptomes of B. amyloliquefaciens FZB42 in biofilm formation and planktonic cells
RNA-seq of coding RNA
Bacillus amyloliquefaciens
4
16/03/2017
-
ENA
109
-
ChIPSeq profiling of LIR3 binding sites in C.elegans
ChIP-seq
Caenorhabditis elegans
3
16/03/2017
-
ENA
113
-
Functional sequestration of MOAG-2/LIR-3 by polyglutamine expansion proteins
RNA-seq of coding RNA
Caenorhabditis elegans
27
16/03/2017
-
ENA
115
-
Single cell RNA-sequencing of Spike-ins and mESC using STRT-Seq on C1 System
RNA-seq of coding RNA from single cells
Mus musculus
1
15/03/2017
-
ENA
160
-
Effect of MIR-375 expression on UM-SCC-1
transcription profiling by array
Homo sapiens
6
15/03/2017
-
141
-
Whole genome gene expression analysis of a genomic mouse model of tauopathy
transcription profiling by array
Mus musculus
6
15/03/2017
123
-
Study of the quorum sensing regulon of the acidophilic Acidithiobacillus ferrooxidans ATCC23270 with cDNA microarrays
transcription profiling by array
Acidithiobacillus ferrooxidans ATCC 23270
12
15/03/2017
-
96
-
OFD1 interacts with the Preinitiation complex of translation and regulates translation of specific targets in the kidney
transcription profiling by array
Mus musculus
8
15/03/2017
-
137
-
Single cell RNA-sequencing of Spike-ins and mESC using Smart-Seq2 on 96-well plates
RNA-seq of coding RNA from single cells
Mus musculus
56
14/03/2017
-
ENA
189
-
RNA-seq analysis of neutrophils from CD40L-deficient patients and healthy controls, as well as HL-60 promielocytic cell line
RNA-seq of coding RNA
Homo sapiens
24
14/03/2017
ENA
204
-
Mouse bone marrow-derived dendritic cell differentiation in dense and sparse cultures
transcription profiling by array
Mus musculus
16
14/03/2017
-
101
-
Identification of target genes of the transcription factors TCF1 and TCF3 in mouse embryonic stem cells (ChIP-Seq)
ChIP-seq
Mus musculus
4
14/03/2017
-
ENA
104
-
Transcription profiling by array of mouse white adipose tissue from miR-22 knockouts and littermates
transcription profiling by array
Mus musculus
6
13/03/2017
-
98
-
Transcription profiling by array of skeletal muscles from miR-22 KO, miR-22/ERalpha knockout, and miR-22KO/muscle-specific ERalpha knockout mice against wild type controls to study the mutual regulation of miR-22 and ERalpha in muscle tissue
transcription profiling by array
Mus musculus
18
13/03/2017
-
90
-
Generation of a new mouse model of glaucoma characterized by reduced expression of the AP-2 and AP-2
DNA-seq
Mus musculus
1
10/03/2017
-
ENA
130
-
DNA methylation variations are required for reversible EMT induced by cancer-associated fibroblasts in PCa cells
RNA-seq of coding RNA
Homo sapiens
12
09/03/2017
-
ENA
176
-
Gene expression data for worker honey bees experimentally exposed to a dual infection with Deformed wing virus and Nosema ceranae
transcription profiling by array
Apis mellifera
20
08/03/2017
164
-
Single cell RNA-sequencing of Spike-ins and Control RNA using 10x Genomics Chromium system
RNA-seq of coding RNA from single cells
Homo sapiens
2
08/03/2017
-
ENA
300
-
Transcription profiling of THP-1 cells under hypoxic growth conditions
transcription profiling by array
Homo sapiens
9
08/03/2017
-
143
-
MiRNome profiling of glioblastoma tissues and peritumoral regions
microRNA profiling by high-throughput sequencing
Homo sapiens
23
08/03/2017
-
157
-
Myocardial Gene Expression Profiling to Predict and Identify Cardiac Allograft Acute Cellular Rejection
transcription profiling by array
Homo sapiens
36
07/03/2017
141
-
Impact of BRAF kinase inhibitors on miRNomes and transcriptomes of melanoma cells (gene expression dataset)
transcription profiling by array
Homo sapiens
18
06/03/2017
-
214
-
Impact of BRAF kinase inhibitors on miRNomes and transcriptomes of melanoma cells (miRNA dataset)
microRNA profiling by array
Homo sapiens
18
06/03/2017
-
148
-
RNA-seq of sea ice bacteria grown at two temperatures and two growth phases
RNA-seq of coding RNA
Polaribacter irgensii, Shewanella frigidimarina
8
05/03/2017
-
ENA
132
-
Gene expression profile of in vivo and in vitro matured human oocytes revealed by microarray analysis
transcription profiling by array
Homo sapiens
12
05/03/2017
-
130
-
Expression data from Ribonuclease Inhibitor (RI/Rnh1) deficient Human K562 cells
RNA-seq of coding RNA
Homo sapiens
6
05/03/2017
-
ENA
117
-
Ultra-deep sequencing of ribosome-associated poly-adenylated RNA in early Drosophila embryo reveals hundreds of conserved translating sORFs
RNA-seq of coding RNA
Drosophila melanogaster
3
05/03/2017
-
ENA
118
-
Fatty acid composition of developing tree peony (Paeonia section Moutan DC.) seeds and transcriptome analysis during seed development
RNA-seq of coding RNA
Paeonia ostii
6
04/03/2017
-
ENA
106
-
DNA methylation variations are required for reversible EMT induced by cancer-associated fibroblasts in PCa cells
methylation profiling by array
Homo sapiens
24
03/03/2017
-
151
-
Transcriptomic Analysis of Responses to Imbalanced Carbon:Nitrogen Availabilities in Rice Seedlings
transcription profiling by array
Oryza sativa Japonica Group
12
02/03/2017
-
123
-
Transcriptomic profiling of lung monocytes and macrophages in mice
transcription profiling by array
Mus musculus
14
01/03/2017
108
-