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Showing 1 - 500 of 71567 experiments
AccessionTitleTypeOrganismAssaysReleasedProcessedRawViewsAtlas
Transcriptional profiling by array of ovaries from aged mice
transcription profiling by array
Mus musculus
3
Today
-
-
-
A nuclear-localized red fluorescence knock-in reporter allele for mouse pancreatic beta-cells
RNA-seq of coding RNA
Mus musculus
14
Today
-
ENA
3
-
Transcription profiling by array of adult Drosophila melanogaster with decreased expression of mitofusin (dMfn)
transcription profiling by array
Drosophila melanogaster
8
Yesterday
-
2
-
Transcriptome of Escherichia coli O157:H7 (Sakai) in response to spinach leaf lysates by RNA-seq
RNA-seq of coding RNA
Escherichia coli
6
13/12/2018
-
ENA
-
-
Targeted DNA-seq of Human HepG2 cells following editing with CRISPR/Cas9
DNA-seq
Homo sapiens
10
13/12/2018
-
ENA
-
-
Targeted DNA-seq of Human HepG2 cells following editing with CRISPR/Cas9 upon chromatin modulation with TSA and EZH2i
DNA-seq
Homo sapiens
30
13/12/2018
-
ENA
-
-
ChIP-seq for TAZ (WWTR1) binding region in C2C12 myoblasts
ChIP-seq
Mus musculus
8
13/12/2018
ENA
-
-
A Liver Hepcidin-Intestinal HIF-2α Axis Regulates Iron Absorption During Systemic Iron Deficiency, Hypoxia and Hemochromatosis
RNA-seq of coding RNA
Mus musculus
12
12/12/2018
-
ENA
7
-
Reverse transcriptase inhibitors in Aicardi-Goutières syndrome
RNA-seq of coding RNA
Homo sapiens
28
12/12/2018
-
ENA
-
-
Wide-ranging analysis of microRNA profiles in sporadic amyotrophic lateral sclerosis using next-generation sequencing
microRNA profiling by high throughput sequencing
Homo sapiens
8
12/12/2018
-
ENA
4
-
Microarray of isolated adipocytes from subcutaneous adipose tissue of severely obese patients compared to lean controls
transcription profiling by array
Homo sapiens
24
12/12/2018
-
-
-
Transcription profiling by array of eWAT from CD1 WT and Irx5-KO mice fed a high fat diet
transcription profiling by array
Mus musculus
12
12/12/2018
-
-
-
Comprehensive transcriptome analysis of synovium and peripheral blood reveals major disease heterogeneity early in the RA disease process prior to therapeutic intervention
RNA-seq of coding RNA
Homo sapiens
154
12/12/2018
-
ENA
12
-
RNA-seq of mouse alveolar macrophages (ADAR1 deficient and WT)
RNA-seq of coding RNA
Mus musculus
2
11/12/2018
-
ENA
8
-
Transcriptome changes in the mice lumbar spinal cord after the 30-day space flight and subsequent 7-day re-adaptation on Earth
transcription profiling by array
Mus musculus
6
08/12/2018
34
-
Transcriptome profiling of human fetal small intestine epithelial cell line FHs 74 int (ATCC CCL-241) in response to human skimmed milk treatment for 12 hours
transcription profiling by array
Homo sapiens
4
07/12/2018
34
-
RNA-seq from cortex and hippocampus of mice harboring heterozygous and homozygous deletion of Kctd13, as well as wild-type controls
RNA-seq of coding RNA
Mus musculus
47
06/12/2018
ENA
28
-
The yeast GG-NER complex evicts histone H2A.Z-containing barrier nucleosomes from CID boundaries during DNA repair
ChIP-seq
Saccharomyces cerevisiae
27
06/12/2018
-
ENA
31
-
Single-cell RNAseq of Tal1 knockout chimeric mouse embryos at embryonic day 8.5 of mouse development
RNA-seq of coding RNA from single cells
Mus musculus
80
05/12/2018
ENA
31
-
Single-cell RNAseq of control chimeric mouse embryos at embryonic days 7.5 and 8.5 of mouse development
RNA-seq of coding RNA from single cells
Mus musculus
120
05/12/2018
ENA
25
-
Single-cell RNA-seq of mouse endothelial cells from three distinct embryonic locations
RNA-seq of coding RNA from single cells
Mus musculus
288
05/12/2018
-
ENA
24
-
Single-cell RNAseq of Tal1 knockout chimeric mouse embryos at embryonic days 7.5 and 8.5 of mouse development
RNA-seq of coding RNA
Mus musculus
128
05/12/2018
-
ENA
27
-
Timecourse single-cell RNAseq of whole mouse embryos harvested between days 6.5 and 8.5 of development
RNA-seq of coding RNA from single cells
Mus musculus
2560
05/12/2018
ENA
27
-
Genome-wide screen for regulators of the yeast pleiotropic drug response
genotyping by array
Saccharomyces cerevisiae S288C
72
05/12/2018
-
31
-
Gene expression microarray analysis of whole intestine from Kaiso-/- mice
transcription profiling by array
Mus musculus
6
05/12/2018
-
38
-
RNA-seq expression profiling of humain MAIT cells in blood and liver as compared to mainstream TCD4+ and TCD8+ cells
RNA-seq of coding RNA
Homo sapiens
24
03/12/2018
ENA
41
-
Microarray expression profiling of NKT and MAIT subsets in different organs of B6-MAIT/CAST mice
transcription profiling by array
Mus musculus
42
03/12/2018
34
-
Transcriptomic study of the pathogenic fungus Aspergillus fumigatus during a murine intranasal infection, using the Whole A. fumigatus Genome Expression 44K v.1 microarray (AWAFUGE)
transcription profiling by array
Aspergillus fumigatus Af293
12
03/12/2018
-
43
-
A genomic biomarker signature can predict skin sensitizers using a cell-based in vitro alternative to animal tests
transcription profiling by array
Homo sapiens
137
02/12/2018
172
-
Comprehensive RNA-Seq Profiling of the Lung Transcriptome of Bashbay Sheep in Response to Experimental Mycoplasma ovipneumoniae Infection
RNA-seq of coding RNA
Ovis aries
9
01/12/2018
-
ENA
58
-
Receptor Tyrosine Kinase pathway activation is sufficient to trigger chordoma in zebrafish
RNA-seq of coding RNA
Danio rerio
6
01/12/2018
-
ENA
45
-
RNA-seq of JAK2VF and DNMT3A mutant Myelofibrosis patients
RNA-seq of coding RNA
Homo sapiens
8
01/12/2018
ENA
58
-
MicroRNA-regulated phase change controls reproductive stem elongation (Experiment M2)
transcription profiling by array
Hordeum vulgare
28
01/12/2018
-
45
-
Survey of RNA viruses present in East African maize with symptoms of maize lethal necrosis
RNA-seq of coding RNA
Zea mays
30
01/12/2018
-
ENA
50
-
RNA-seq of zebrafish larvae fed with different diets
RNA-seq of coding RNA
Danio rerio
4
01/12/2018
-
ENA
41
-
The role of the transcription factors GATA2 and FOXA1 in immortalized basal-like prostate epithelial cells
transcription profiling by array
Homo sapiens
23
01/12/2018
-
45
-
Analysis of mouse T cell transcription profile after co-culture with BaF3 cells with or without the oncogenic point mutation JAK2 V617F
transcription profiling by array
Mus musculus
7
01/12/2018
-
41
-
Transcription profiling of human blood eosinophils in eosinophilic asthma patients compared to healthy individuals
transcription profiling by array
Homo sapiens
6
01/12/2018
42
-
Transcriptional profiling by array of fetal and maternal of mesenchymal stem cell (MSC) populations from human term placenta
transcription profiling by array
Homo sapiens
12
01/12/2018
63
-
RNA-seq of the whole retina of rat intravitreally injected with aldosterone
RNA-seq of coding RNA
Rattus norvegicus
6
30/11/2018
ENA
39
-
Corynebacterium Cell Factory Design and Culture Process Optimization for Muconic Acid Biosynthesis
RNA-seq of coding RNA
Corynebacterium glutamicum
2
30/11/2018
-
ENA
39
-
Comparative transcriptomics of B cell transdifferentiation in human and mouse. RNA-Seq data
RNA-seq of coding RNA
Homo sapiens, Mus musculus
24
30/11/2018
-
ENA
47
-
RNA-seq to investigate differential expression of serotype emm1 Streptococcus pyogenes strains S119 and S126
RNA-seq of coding RNA
Streptococcus pyogenes
12
30/11/2018
-
ENA
28
-
Transcription start site profiling of a Streptococcus pyogenes emm1 strain
RNA-seq of coding RNA
Streptococcus pyogenes
2
30/11/2018
-
ENA
34
-
Genomic encoding of transcriptional burst kinetics
RNA-seq of coding RNA from single cells
Mus musculus
480
30/11/2018
-
ENA
31
-
Inducible defense response of C. cinerea against its fungiverous nematode A. avenae in microfluidics device
RNA-seq of coding RNA
Coprinopsis cinerea
12
30/11/2018
ENA
31
-
RNA-seq of mid-gestation mouse mammary tissues from E12.5 stage organs
RNA-seq of coding RNA
Mus musculus
24
30/11/2018
-
ENA
24
-
RNA-seq of embryonic mammary progenitor cell lines (part A)
RNA-seq of coding RNA
Mus musculus
46
30/11/2018
-
ENA
37
-
Embryonic mouse mammary progenitor cells +/-Sox9
RNA-seq of coding RNA
Mus musculus
12
30/11/2018
-
ENA
30
-
Opposing Role of Dpf2 and Eed on Differentiation of Mouse Embryonic Stem Cells via Regulating Tbx3 (4C)
4C
Mus musculus
4
30/11/2018
-
ENA
26
-
Opposing Role of Dpf2 and Eed on Differentiation of Mouse Embryonic Stem Cells via Regulating Tbx3 (RNA-seq)
RNA-seq of coding RNA
Mus musculus
4
30/11/2018
-
ENA
34
-
Role of Anlotinib-induced CCL2 decrease in anti-angiogensis and response prediction for Non-Small Cell Lung Cancer therapy
RNA-seq of coding RNA
Homo sapiens
4
30/11/2018
-
ENA
26
-
Low input Hi-C datasets for a diffuse large B-cell lymphoma sample, healthy control human B-cells and mouse embryonic stem cells
Hi-C
Homo sapiens, Mus musculus
16
30/11/2018
ENA
236
-
Investigating epigenetic effects of activation-induced deaminase in chronic lymphocytic leukemia
methylation profiling by array
Homo sapiens
16
29/11/2018
28
-
Single-cell RNA-seq of mouse developing spinal cord
RNA-seq of coding RNA from single cells
Mus musculus
23
29/11/2018
ENA
22
-
RNA-Seq of full-length RNA from worker and royal jelly of honey bees (Apis mellifera)
RNA-seq of non coding RNA
Apis mellifera
6
29/11/2018
-
ENA
25
-
Response of Escherichia coli after Phage T4 Ghost Adsorption
transcription profiling by array
Escherichia coli K-12
8
29/11/2018
-
15
-
Methylation profiling of human trophoblast organoids providing a model for maternal-fetal interactions in early pregnancy and placenta tissue for comparison
methylation profiling by array
Homo sapiens
18
28/11/2018
-
31
-
Comparison of the gene expression profile of a wild type Pseudo-nitzschia multistriata strain and a strain displaying sex reversal
RNA-seq of coding RNA
Pseudo-nitzschia multistriata
4
28/11/2018
-
ENA
20
-
Transcriptomic profile of human placenta derived trophoblast organoid cultures with its tissue of origin, human placental villi
transcription profiling by array
Homo sapiens
18
28/11/2018
68
-
RNA sequencing of Mus musculus T helper cell type 2 with retroviral overexpression of different genes
RNA-seq of coding RNA
Mus musculus
156
27/11/2018
-
ENA
17
-
RNA-seq of the prototrophic non-hyphal smooth-33 mutant (FKP514) and its prototrophic control strain (FKP391)
RNA-seq of coding RNA
Yarrowia lipolytica
5
26/11/2018
-
ENA
21
-
Transcriptomic profiles of two sponge species upon exposure to microbial-associated molecular patterns (lipopolysaccharide and peptidoglycan) compared against control (sterile artificial seawater)
RNA-seq of coding RNA
Aplysina aerophoba, Dysidea avara
35
26/11/2018
ENA
22
-
Transcription profiling of colon mucosa from HLAB27 transgenic rats fed extra-virgin olive oil rich in polyphenols
transcription profiling by array
Rattus norvegicus
3
26/11/2018
-
18
-
Sparse feature selection methods identify unexpected global cellular response to strontium-containing materials
transcription profiling by array
Homo sapiens
75
25/11/2018
23
-
RNA-seq of 36 individuals with autism spectrum disorder
RNA-seq of coding RNA
Homo sapiens
36
25/11/2018
ENA
21
-
ChIP-seq of Mus musculus T helper cell type 2 with retroviral overexpression of Bhlhe40 and Pparg
ChIP-seq
Mus musculus
4
23/11/2018
-
ENA
37
-
Opposing Role of Dpf2 and Eed on Differentiation of Mouse Embryonic Stem Cells via Regulating Tbx3 (ChIP-seq)
ChIP-seq
Mus musculus
39
23/11/2018
-
ENA
30
-
RNA-Seq of Danionine species
RNA-seq of coding RNA
Danio aesculapii, Danio albolineatus, Danio rerio
13
22/11/2018
-
ENA
1
-
ChIP-seq of beta-catenin in TCF/LEF or beta-cetenin knockout HEK293T cells to study TCF/LEF dependent and independent regulation of Wnt/beta-catenin transcription
ChIP-seq
Homo sapiens
13
22/11/2018
-
ENA
26
-
Bisulphite-seq to investigate the proto CpG island methylator phenotype of sessile serrated adenoma/polyps
Bisulfite-seq
Homo sapiens
62
22/11/2018
-
ENA
26
-
RNA-seq to investigate the proto CpG island methylator phenotype of sessile serrated adenoma/polyps
RNA-seq of coding RNA
Homo sapiens
62
22/11/2018
-
ENA
27
-
Bisulphite-seq to investigate the proto CpG island methylator phenotype of sessile serrated adenoma/polyps, dataset 2
Bisulfite-seq
Homo sapiens
12
22/11/2018
-
ENA
27
-
RNA-seq expression profiling upon DDX3X or DDX54 knockdown in human breast cancer MCF7 cells
RNA-seq of coding RNA
Homo sapiens
15
21/11/2018
-
ENA
55
-
iCLIP of DDX3X and DDX54 in human breast cancer MCF7 cells
CLIP-seq
Homo sapiens
6
21/11/2018
-
ENA
42
-
Transcription profiling of fibroblasts from a Friedreich Ataxia patient to identify genes involved in Friedreich Ataxia pathophysiology
transcription profiling by array
Homo sapiens
6
21/11/2018
-
33
-
Transcription profiling by array of rat experimental tumours to study the effects of dietary lipids
transcription profiling by array
Rattus norvegicus
30
21/11/2018
-
30
-
Microarray of Saccharomyces cerevisiae grown by inoculation into 2nM rapamycin against untreated cultures
transcription profiling by array
Saccharomyces cerevisiae
16
20/11/2018
-
30
-
Transcriptional profiling of long-term stimulated primary murine intestinal fibroblasts with interleukin-36
RNA-seq of coding RNA
Mus musculus
6
19/11/2018
-
ENA
36
-
Identifying the fitness cost of rifampicin-resistance in Mycobacterium tuberculosis through RNAseq profiling
RNA-seq of coding RNA
Mycobacterium tuberculosis
36
18/11/2018
ENA
43
-
ChIP-chip of primary hippocampal neurons treated with lead against non-treated controls
transcription profiling by array
Rattus norvegicus
6
17/11/2018
-
41
-
RNA-seq comparison of fetal lung and cultured fetal lung derived organoids with pluripotent stem cell derived lung organoids
RNA-seq of coding RNA
Homo sapiens
31
17/11/2018
-
ENA
38
-
Transcriptomics study on the effect of alternative oxidase expression in Bcs1l mutant (S78G) mice (Mus musculus)
RNA-seq of coding RNA
Mus musculus
288
16/11/2018
-
ENA
54
-
Gene expression profiling of patients from the Danish Center for Translational Breast Cancer Research program
transcription profiling by array
Homo sapiens
94
16/11/2018
33
-
Single-cell transcriptional analysis reveals ILC-like cells in zebrafish
RNA-seq of coding RNA from single cells
Danio rerio
4
16/11/2018
-
ENA
33
-
Single-cell transcriptional analysis reveals innate lymphoid cell (ILC)-like cells in zebrafish
RNA-seq of coding RNA from single cells
Danio rerio
1056
16/11/2018
-
ENA
37
-
Transcription profiling by array to investigate susceptibility to multiple azole resistance in Candida glabrata
transcription profiling by array
[Candida] glabrata
8
16/11/2018
-
34
-
RNASeq of multiple Mycoplasma species in wild-type condition including: Mycoplasma pneumoniae, Mycoplasma genitalium, Mycoplasma hyopneumoniae, Mycoplasma capricolum, Mycoplasma gallisepticum, Mycoplasma mycoides
RNA-seq of coding RNA
Mycoplasma capricolum subsp. capricolum ATCC 27343, Mycoplasma gallisepticum str. R(high), Mycoplasma genitalium G37, Mycoplasma hyopneumoniae 168, Mycoplasma mycoides subsp. capri LC str. 95010, Mycoplasma pneumoniae M129
11
16/11/2018
-
ENA
35
-
Single-cell phenotyping and RNA sequencing reveal novel patterns of gene expression heterogeneity and regulation during growth and stress adaptation in a unicellular eukaryote
RNA-seq of coding RNA from single cells
Schizosaccharomyces pombe
2806
14/11/2018
-
ENA
43
-
The effect of micronutrient supplementation on growth and hepatic metabolism in diploid and triploid Atlantic salmon (Salmo salar) parr fed a low marine ingredient diet
transcription profiling by array
Salmo salar
36
14/11/2018
-
44
-
RNA-seq of adipose tissue from pigs divergent in feed efficiency reveals variations in adipose growth, extracellular matrix formation, lipid metabolism and immune response
RNA-seq of coding RNA
Sus scrofa
20
14/11/2018
-
ENA
37
-
MDA-MB-231/1833 bone-metastatic breast cancer cell gene expression after conditioning in conditioned medium from HUVECs conditioned in conditioned medium from static and flow-stimulated MLO-Y4 osteocytes
RNA-seq of coding RNA
Homo sapiens
8
13/11/2018
ENA
40
-
RNA-seq study on time of day specific Glucocorticoid action in mouse liver and lung tissues
RNA-seq of coding RNA
Mus musculus
32
13/11/2018
-
ENA
43
-
RNASeq data analysis of wild type and reverb alpha knockout cells from mouse liver, at different time points, with or without DEX treatment
RNA-seq of coding RNA
Mus musculus
40
13/11/2018
-
ENA
34
-
Histone H3K27ac ChIP-seq binding regions in mouse liver
ChIP-seq
Mus musculus
16
13/11/2018
ENA
31
-
ZEB1 ChIP-seq Data from Control CD8+cDC1
ChIP-seq
Mus musculus
1
13/11/2018
-
ENA
26
-
RNA-seq from ZEB1 Knockdown and Control CD8+cDC1
RNA-seq of coding RNA
Mus musculus
12
13/11/2018
-
ENA
31
-
RNA-seq of human fibroblast cell cultures treated with resveratrol against DMSO treated controls, with and without siRNA treatment targeting SIRT1
RNA-seq of coding RNA
Homo sapiens
8
12/11/2018
ENA
36
-
Selenite treatment of a Candida albicans wild type strain
transcription profiling by array
Candida albicans
32
12/11/2018
-
29
-
Selenite treatment of a Debaryomyces hansenii wild type strain
transcription profiling by array
Debaryomyces hansenii
32
12/11/2018
-
30
-
Selenite treatment of a Kluyveromyces lactis wild type strain
transcription profiling by array
Kluyveromyces lactis
32
12/11/2018
-
29
-
Selenite treatment of a Lachancea kluyveri wild type strain
transcription profiling by array
Lachancea kluyveri
32
12/11/2018
-
28
-
Selenite treatment of a Lachancea thermotolerans wild type strain
transcription profiling by array
Lachancea thermotolerans
32
12/11/2018
-
24
-
Selenite treatment of a Yarrowia lipolytica wild type strain
transcription profiling by array
Yarrowia lipolytica
32
12/11/2018
-
21
-
Transcriptome analyses of the response of C. glabrata wild type cells to iron excess, salt excess, cadmium treatment and iron starvation
transcription profiling by array
[Candida] glabrata
16
12/11/2018
-
20
-
Transcriptome analyses of a C. glabrata strain deleted for the transcription factor Aft2
transcription profiling by array
[Candida] glabrata
8
12/11/2018
-
23
-
Selenite treatment of a Candida glabrata wild type strain
transcription profiling by array
[Candida] glabrata
32
12/11/2018
-
21
-
Selenite treatment of a Saccharomyces cerevisiae wild type strain
transcription profiling by array
Saccharomyces cerevisiae
32
12/11/2018
-
20
-
RNA-seq of wild type Mycobacterium smegmatis mc2 155 (exponential and stationary phase) and Ms1 deletion strain (exponential and stationary phase)
RNA-seq of coding RNA
Mycolicibacterium smegmatis
12
12/11/2018
-
ENA
28
-
Single cell RNA-seq of mouse skin cells
RNA-seq of coding RNA from single cells
Mus musculus
2
11/11/2018
-
ENA
35
-
High content imaging in the screening of biomaterial-induced MSC behavior
transcription profiling by array
Homo sapiens
12
10/11/2018
23
-
Ribosome profiling of NEW1 knock-out of budding yeast Saccharomyces cerevisiae
RNA-seq of coding RNA
Saccharomyces cerevisiae
12
10/11/2018
-
ENA
25
-
Salicylic acid-induced gene expression in wild-type Col-0 and mutant upl3-4 Arabidopsis thaliana plants
RNA-seq of coding RNA
Arabidopsis thaliana
11
09/11/2018
-
ENA
52
-
ChIP-Seq of H3K4me3 in primary unstimulated monocyte subsets from 2 healthy donors buffy coats
ChIP-seq
Homo sapiens
12
09/11/2018
-
ENA
28
-
RNA-seq of primary human monocytes (4 healthy donors)
RNA-seq of coding RNA
Homo sapiens
8
09/11/2018
-
ENA
28
-
ChiP-seq of H3K4me3 in primary unstimulated monocytes from 3 healthy donors buffy coats and from 4 CMML patients
ChIP-seq
Homo sapiens
14
09/11/2018
ENA
28
-
Serum microRNA profiles from the Malmö Diet and Cancer Study - Cardiovascular Cohort
transcription profiling by RT-PCR
Homo sapiens
12
08/11/2018
-
26
-
Gain of chromatin loops marks the exit from naïve pluripotency – in-situ Hi-C data
Hi-C
Mus musculus
16
08/11/2018
-
ENA
41
-
Gain of chromatin loops marks the exit from naive pluripotency - ChIP seq for CTCF and Rad21
ChIP-seq
Mus musculus
12
08/11/2018
-
ENA
59
-
TCC in pluripotent and differentiated cells
DNA-seq
Mus musculus
38
08/11/2018
-
ENA
43
-
RNA-seq of Mus musculus beta cells to determine the role of the miR-200–Zeb1 axis in beta cell tumor development
RNA-seq of coding RNA
Mus musculus
22
07/11/2018
-
ENA
47
-
Transcription profiling of IGR-CaP1 prostate cancer cells resistant to docetaxel compared to non-resistant cells
transcription profiling by array
Homo sapiens
24
07/11/2018
-
32
-
Single-cell analysis of T-cells from mouse neonate thymuses in a wild type control and a placental specific isoform of Igf2 knock-down (igf2-P0)
RNA-seq of coding RNA from single cells
Mus musculus
7
06/11/2018
-
ENA
40
-
Expression profiling of 3 and 24 months mouse skeletal muscle (RNA-seq)
RNA-seq of coding RNA
Mus musculus
2
03/11/2018
-
ENA
49
-
RNA-seq of human ovarian cancer cell line OVSAHO parental and CB-5083-resistant cells
RNA-seq of coding RNA
Homo sapiens
12
02/11/2018
-
ENA
87
-
RNA-seq of TCF/LEF or beta-cetenin knockout HEK293T cells to study TCF/LEF dependent and independent regulation of Wnt/beta-catenin transcription
RNA-seq of coding RNA
Homo sapiens
18
02/11/2018
-
ENA
41
-
Herbal formula YYJD induces lung cancer cell apoptosis via activation of EGR1 (RNA-seq)
RNA-seq of coding RNA
Homo sapiens
3
01/11/2018
-
ENA
109
-
Herbal formula YYJD induces lung cancer cell apoptosis via activation of EGR1
ChIP-seq
Homo sapiens
2
01/11/2018
-
ENA
85
-
Single-cell RNA sequencing of marmoset embryonic development
RNA-seq of coding RNA
Callithrix jacchus
196
01/11/2018
-
ENA
74
-
Microarray gene expression analysis of human melanoma A375 cells treated with 0.5mM phenformin against untreated control
transcription profiling by array
Homo sapiens
4
01/11/2018
-
67
-
Microarray gene expression analysis of human melanoma A375 cells resistant to 0.5mM phenformin against sensitive naive cells
transcription profiling by array
Homo sapiens
4
01/11/2018
-
62
-
RNA-Seq of control, RNPS1 knockdown and rescue in HeLa cells
RNA-seq of coding RNA
Homo sapiens
12
01/11/2018
-
ENA
92
-
Investigation of placental DNA methylation in obese women exposed to Metformin during pregnancy
methylation profiling by array
Homo sapiens
213
01/11/2018
-
47
-
RNA-seq of response to heat stress and lipopolysaccharide in the thymic transcriptome of chicken broiler and fayoumi lines
RNA-seq of coding RNA
Gallus gallus
31
01/11/2018
-
ENA
64
-
Combined transcriptome analysis and polysome profiling of Streptomyces coelicolor MT1110 in SMMS
transcription profiling by array
Streptomyces coelicolor A3(2)
29
01/11/2018
-
46
-
Transcription profiling under heat stress of transgenic Arabidopsis lines in which expression of BPMs were suppressed by an amiRNA
transcription profiling by array
Arabidopsis thaliana
4
01/11/2018
-
46
-
Transcription profiling by array of mesometrial poles of implantation chamber from gestation day 10.5 beta-2-microglobulin knockout mice and wild-type controls
transcription profiling by array
Mus musculus
6
01/11/2018
48
-
Fine control of nuclear confinement identifies a threshold deformation leading to lamina rupture and induction of specific genes
transcription profiling by array
Homo sapiens
4
31/10/2018
60
-
Surface topography guides morphology and spatial patterning of induced pluripotent stem cell colonies
transcription profiling by array
Homo sapiens
12
31/10/2018
43
-
Generation of progesterone-responsive endometrial fibroblasts from human induced pluripotent stem cells: role of the WNT/CTNNB1 pathway
RNA-seq of coding RNA
Homo sapiens
27
31/10/2018
ENA
63
-
Identification of Elg1 interaction partners and effects on post-replication chromatin re-formation
MNase-seq, ChIP-seq
Saccharomyces cerevisiae
38
31/10/2018
-
ENA
43
-
Gene expression profiling of human germ cell cancer
transcription profiling by array
Homo sapiens
34
31/10/2018
-
60
-
Microarray of laser capture microdissected Paneth cells from Atg16l1 T300A and wildtype littermates mice that were either exposed or not with mainstream cigarette smoking for 6 weeks
transcription profiling by array
Mus musculus
32
31/10/2018
-
36
-
16S rRNA sequencing of fecal samples from Atg16l1 T300A and wildtype littermate mice that were exposed to mainstream cigarette smoking co-housed with mice from the same genotype but not exposed to cigarette smoking
DNA-seq
mouse gut metagenome
39
31/10/2018
ENA
45
-
16S rRNA sequencing of fecal samples from Atg16l1 T300A and wildtype littermate mice that were either exposed or not to mainstream cigarette smoking for 6 weeks
DNA-seq
mouse gut metagenome
29
31/10/2018
ENA
38
-
RNA-seq of full thickness small intestine from Atg16l1 T300A and wildtype littermate mice that were either exposed or not with mainstream cigarette smoking for 6 weeks
RNA-seq of coding RNA
Mus musculus
15
31/10/2018
ENA
48
-
Microarray comparison of NK cell from healthy donors and day 14 post stem cell transplantation
transcription profiling by array
Homo sapiens
9
31/10/2018
-
49
-
Transcriptional changes in murine keratinocyte harbouring heterozygous or homozygous R245W p53 mutation in vitro
transcription profiling by array
Mus musculus
24
31/10/2018
-
68
-
Transcription profiling by array of lymphocytes from BRCA1-mutation carriers and controls in response to irradiation
transcription profiling by array
Homo sapiens
36
31/10/2018
-
52
-
Transcriptional Profiling of Human Airway Smooth muscle cells from subjects with and without asthma-effects of mimicking viral challenge
transcription profiling by array
Homo sapiens
18
29/10/2018
3
-
Exome-seq of Jak2VF erythroid progenitors cells transduced with Dnmt3a-Cas9-GFP lentivirus vs. emp-Cas9-GFP controls 17 weeks post transplantation
DNA-seq
Mus musculus
8
29/10/2018
-
ENA
35
-
RNAseq analysis of IKKbeta knockdown EDC4 knockdown irradiated and untreated
RNA-seq of coding RNA
Homo sapiens
16
29/10/2018
ENA
55
-
Single-cell RNA-seq on Drisophila melanogaster wild type third instar eye discs
RNA-seq of coding RNA from single cells
Drosophila melanogaster
11
29/10/2018
ENA
32
-
RNA-seq in GR18 cell line to identify genes regulated by the Glucocorticoid Receptor
RNA-seq of coding RNA
Homo sapiens
6
29/10/2018
ENA
49
-
synSTARR-seq with Glucocorticoid Receptor synthetic binding sites in GR18 cell line
RNA-seq of coding RNA
Homo sapiens
12
29/10/2018
ENA
43
-
ATAC-seq of Jak2VF LSK cells transduced with Dnmt3a-Cas9-GFP lentivirus vs. emp-Cas9-GFP controls 8 weeks post transplantation
ATAC-seq
Mus musculus
16
29/10/2018
ENA
33
-
RNA-seq of Jak2VF LSK cells transduced with Dnmt3a-Cas9-GFP lentivirus vs. emp-Cas9-GFP controls 8 weeks post transplantation
RNA-seq of coding RNA
Mus musculus
28
29/10/2018
ENA
30
-
RNA-seq of Jak2VF LSK cells transduced with Dnmt3a-Cas9-GFP lentivirus vs. emp-Cas9-GFP controls one week and five weeks post methylcellulose plating
RNA-seq of coding RNA
Mus musculus
36
29/10/2018
-
ENA
30
-
RNA-seq of total royal jelly and MRJP-3-bound RNA
RNA-seq of coding RNA
Apis mellifera
5
28/10/2018
-
ENA
30
-
Transcriptional Profiling of cultured human airway smooth cells from subjects with and without asthma
transcription profiling by array
Homo sapiens
11
27/10/2018
42
-
RNA-seq of primary mouse monocytes from miR-150 knockout and Tet3 knockout mice compared to wild type controls
RNA-seq of coding RNA
Mus musculus
22
26/10/2018
-
ENA
36
-
Genome-wide maps of nuclear lamina interactions in HeLa cells identified using MethylAdenine IDentification (MadID)
MeDIP-seq
Homo sapiens
6
26/10/2018
ENA
95
-
RNA-seq from soleus muscle of NO66-/- and NO66F/F mice
RNA-seq of coding RNA
Mus musculus
2
25/10/2018
ENA
33
-
Drop-seq analysis of bleomycin-treated and control mouse lung single-cell suspensions
RNA-seq of coding RNA from single cells
Mus musculus
10
25/10/2018
ENA
36
-
SLIC-CAGE (Super-Low Input Carrier-CAGE) application on mouse primordial germ cells isolated from embryonic day E11.5
RNA-seq of coding RNA
Mus musculus
6
25/10/2018
-
ENA
35
-
SLIC-CAGE (Super-Low Input Carrier-CAGE) development: comparison with Saccharomyces cerevisiae nAnTi-CAGE and nanoCAGE libraries and validation of SLIC-CAGE on Mus musculus total RNA
RNA-seq of coding RNA
Mus musculus, Saccharomyces cerevisiae S288C
35
25/10/2018
-
ENA
33
-
RNA-seq of human cancer cell line OVCA420* following TIGAR knockdown with shRNA
RNA-seq of coding RNA
Homo sapiens
6
24/10/2018
-
ENA
59
-
Gene expression microarray analysis of lncRNA TCAM1P-004-knockdown or RP11-598D14.1-knockdown in MIHA cells
transcription profiling by array
Homo sapiens
3
24/10/2018
-
60
-
RNA-Seq of human fetal hearts at 9, 12 and 16 weeks of gestation
RNA-seq of coding RNA
Homo sapiens
9
24/10/2018
-
ENA
49
-
CAGE on Drosophila mesodermal and whole embryo samples
RNA-seq of coding RNA
Drosophila melanogaster
6
24/10/2018
-
ENA
46
-
Total and nuclear RNA-seq of whole-embryo and mesodermal cells
RNA-seq of coding RNA
Drosophila melanogaster
11
24/10/2018
-
ENA
45
-
DNA-methylation profiling of human induced pluripotent stem cell -derived intestinal epithelial organoids
methylation profiling by array
Homo sapiens
6
23/10/2018
-
53
-
RNA-seq of mouse hypothalamus to investigate effect of high vs low fat diet
RNA-seq of coding RNA
Mus musculus
16
23/10/2018
ENA
48
-
Rpd3L HDAC links H3K4me3 to transcriptional repression memory
RNA-seq of coding RNA
Saccharomyces cerevisiae
16
23/10/2018
-
ENA
56
-
Microarray of iPSC-derived macrophages generated in a bioreactor process compared to PBMC-derived macrophages and exposed to P. aeruginosa
transcription profiling by array
Homo sapiens
10
23/10/2018
-
55
-
RNA-sequencing of human induced pluripotent stem cell-derived intestinal epithelial organoids
RNA-seq of coding RNA
Homo sapiens
4
22/10/2018
-
ENA
50
-
Regional CNS immune fingerprint in chronic peripheral inflammation
RNA-seq of coding RNA
Mus musculus
34
22/10/2018
-
ENA
51
-
mRNA-seq of HCT116 RNF40 knockdown cells upon TNF-alpha stimulation
RNA-seq of coding RNA
Homo sapiens
12
22/10/2018
ENA
62
-
DNA- and RNA-seq to study the impact of 5-formylcytosine on nucleosome organization and gene expression in embryonic mouse tissues and stem cells
MNase-seq, ChIP-seq, DNA-seq, RNA-seq of coding RNA
Mus musculus, synthetic construct
150
22/10/2018
-
ENA
48
-
RNA-seq of the human breast cancer ERα-suppressed MCF-7(MCF-7/SP10+) cells and of their internal control MCF-7 (MCF-7/C) cells
RNA-seq of coding RNA
Homo sapiens
6
22/10/2018
-
ENA
67
-
Transcription profiling of Populus x canescens developing and mature xylem under short-days and drought stress treatment
RNA-seq of coding RNA
Populus tremula x Populus alba
32
21/10/2018
-
ENA
54
-
DNA methylation of longitudinal samples from The Swedish Adoption/Twin Study of Aging (SATSA)
methylation profiling by array
Homo sapiens
2144
20/10/2018
-
71
-
Microarray analysis comparing zebrafish insulin knockout mutants to non homozygous controls
transcription profiling by array
Danio rerio
2
20/10/2018
-
60
-
Transcription profiling by array to identify Sex-Specific Transcriptome Responses to Polychlorinated Biphenyls (PCBs)
transcription profiling by array
Homo sapiens
232
20/10/2018
84
-
Whole-exome sequencing of genomic DNA extracted from patient-derived melanoma cell lines resistant to vemurafenib (PLX) or trametinib (TRA)
DNA-seq
Homo sapiens
7
20/10/2018
ENA
82
-
Transcription profiling by array of HPV16-positive OPSCC samples from human donors
transcription profiling by array
Homo sapiens
33
20/10/2018
92
-
Human primary adipose-derived stem cells (hpASC) differentiated to white adipocytes stimulated with norepinephrine 3h
RNA-seq of coding RNA
Homo sapiens
8
20/10/2018
-
ENA
60
-
Differential regulation of SGK1 by progesterone activates AP-1/NDRG1 genomic axis in PR-positive and negative breast cancer cells
transcription profiling by array
Homo sapiens
18
19/10/2018
84
-
Ribo-Seq transcriptomic analysis of human RD cells infected with enterovirus strains EV7, EV71, and PV1
RNA-seq of coding RNA
Homo sapiens
12
19/10/2018
-
ENA
99
-
ChIP-seq for H3K27ac and H3K27me3 histone marks in B lymphoblasts derived from control donors or patients with loss of function mutations in TTC7A
ChIP-seq
Homo sapiens
18
19/10/2018
-
ENA
54
-
ChIP-seq for TTC7A binding to chromatin in B lymphoblasts derived from control donors
ChIP-seq
Homo sapiens
3
19/10/2018
-
ENA
65
-
Periosteum contains skeletal stem cells with high bone regenerative potential controlled by Periostin
transcription profiling by array
Mus musculus
16
18/10/2018
-
59
-
Reconstructing the human first trimester fetal-maternal interface using single cell transcriptomics - whole genome sequencing
genotyping by high throughput sequencing
Homo sapiens
54
17/10/2018
-
ENA
88
-
Single cell sequencing of iPSC-dopamine neurons reconstructs disease progression and identifies HDAC4 as a regulator of Parkinson cell phenotypes
RNA-seq of coding RNA from single cells
Homo sapiens
568
17/10/2018
-
ENA
81
-
ChIP-seq of Pbx1, Prep1 and Sp2 in WT MEFs, Sp2ko MEFs and in Sp2ko MEFs ectopically expressing Flag-tagged full length Sp2; and ChIPexo of Sp2 in WT and Sp2ko MEFs
ChIP-seq
Mus musculus
9
17/10/2018
-
ENA
72
-
Transcription profiling of Spunta WT and SP6Aox leaves under warm temperatures
transcription profiling by array
Solanum tuberosum
12
17/10/2018
-
72
-
Reconstructing the human first trimester fetal-maternal interface using single cell transcriptomics - Smartseq 2 data
RNA-seq of coding RNA
Homo sapiens
7597
17/10/2018
ENA
122
-
Transcription profiling by array of Andigena SP5G RNAi leaves, tubers and tuber sprouts
transcription profiling by array
Solanum tuberosum
16
17/10/2018
-
54
-
mRNA expression changes in chicken livers associated with field exposure to DDTs in KwaZulu-Natal, South Africa
transcription profiling by array
Gallus gallus
2
16/10/2018
60
-
Structural and non-structural genes contribute to the genetic diversity of RNA viruses
RNA-seq of coding RNA
Yellow fever virus
16
16/10/2018
-
ENA
82
-
ChIP-seq of neuroblastoma IMR-32, CLB-GA, NGP, IMR-5/75, GI-M-EN, CHP-212, and IMR-5 cell lines to identify TBX2, MYCN, H3K27ac, H3K4me1 and H3K4me3 binding sites
ChIP-seq
Homo sapiens
66
16/10/2018
ENA
100
-
RNA-seq of estrogen (E2) induced changes of mRNA expression in Sus scrofa male and female blastocysts derived from embryonic day 10
RNA-seq of coding RNA
Sus scrofa
36
16/10/2018
ENA
58
-
RNA-seq of estrogen (E2) induced changes of mRNA expression in early pregnant Sus scrofa endometrium
RNA-seq of coding RNA
Sus scrofa
16
16/10/2018
ENA
66
-
mRNAseq of Drosophila S2 cells after knockdown of EJC components
RNA-seq of coding RNA
Drosophila melanogaster
9
15/10/2018
-
ENA
70
-
Transcriptional profiling of autophagy proficient and compromised cell lines, determined by expression levels of Atg5
transcription profiling by array
Mus musculus
6
15/10/2018
-
82
-
DNA-seq of Sus scrofa psoas major muscle tissue to investigate functional dissection of QTL-region affecting fat-deposition
DNA-seq
Sus scrofa
32
15/10/2018
ENA
235
-
PRPF8 iCLIP on HeLa cells in response to eIF4A3 Knockdown
CLIP-seq
Homo sapiens
8
14/10/2018
-
ENA
74
-
Chip-seq to identify HrdB regulated genes in Streptomyces coelicolor
ChIP-seq
Streptomyces coelicolor A3(2)
5
14/10/2018
-
ENA
64
-
Nus factors prevent premature transcription termination of bacterial CRISPR arrays
ChIP-seq
Salmonella enterica subsp. enterica serovar Typhimurium
28
13/10/2018
-
ENA
79
-
RNA-seq analysis of HeLa cells treated with GapmeR antisense oligonucleotides
RNA-seq of coding RNA
Homo sapiens
2
12/10/2018
-
ENA
76
-
Genome-wide ChIP seq analysis of Aspergillus nidulans reveals deregulation of fungal nitrogen metabolism triggered by Streptomyces rapamycinicus
ChIP-seq
Aspergillus nidulans
19
12/10/2018
ENA
66
-
RNA-seq for identifying toxin MazF and MqsR cleavage sites in toxin expression and subsequent recovery cultures of Escherichia coli (mRNA and ncRNA excluding rRNA)
RNA-seq of coding RNA
Escherichia coli K-12
10
11/10/2018
ENA
78
-
Gene expression assessed by microarrays in smoothhead sculpin, sailfin sculpin and Pacific Staghorn sculpin exposed to hypoxia over time
transcription profiling by array
Artedius lateralis, Leptocottus armatus, Nautichthys oculofasciatus
98
11/10/2018
-
62
-
A simple and robust plate-based single-cell ATAC-seq on various tissues and cell lines
ATAC-seq
Homo sapiens, Mus musculus, mixed sample
7104
10/10/2018
-
ENA
92
-
RNA-seq of muscle from pigs divergent in feed efficiency and product quality
RNA-seq of coding RNA
Sus scrofa
20
10/10/2018
-
ENA
72
-
RNA-Seq study of lipid regulation in Aphis gossypii parasitized by Lysiphlebia japonica
RNA-seq of coding RNA
Aphis gossypii
6
10/10/2018
-
ENA
54
-
RNA-Seq study of 3-days larva and pupa in Lysiphlebia japonica
RNA-seq of coding RNA
Lysiphlebia japonica
6
10/10/2018
-
ENA
68
-
Bulk RNA-Seq of whole testis sampled from juvenile mice
RNA-seq of coding RNA
Mus musculus
90
09/10/2018
ENA
69
-
Whole-genome sequencing of the 5T and 5T33 murine models for multiple myeloma
DNA-seq
Mus musculus
7
09/10/2018
-
ENA
79
-
Whole-exome sequencing of the 5T and 5T33 murine models for multiple myeloma
DNA-seq
Mus musculus
7
09/10/2018
-
ENA
56
-
RNA-seq of 5 populations from the regenerative region of the brain of young and old mice
RNA-seq of coding RNA
Mus musculus
40
08/10/2018
-
ENA
81
-
Global transcriptional response of a Bordetella bronchiseptica Bvg- phase-locked mutant (delta_bvgS) after exposure to blood
transcription profiling by array
Bordetella bronchiseptica
3
07/10/2018
58
-
Global transcriptional response of Bordetella bronchiseptica after exposure to serum
transcription profiling by array
Bordetella bronchiseptica
3
07/10/2018
49
-
Global transcriptional response of Bordetella bronchiseptica after exposure to blood
transcription profiling by array
Bordetella bronchiseptica
3
07/10/2018
55
-
Time course ChIP-seq analysis of the human GM12878 lymphoblasts upon Sendai Virus infection
ChIP-seq
Homo sapiens
10
07/10/2018
-
ENA
62
-
Time course GRO-seq analysis of the human GM12878 lymphoblasts upon Sendai Virus infection
GRO-seq
Homo sapiens
12
07/10/2018
-
ENA
61
-
Pro-osteogenic trophic effects by PKA activation in human mesenchymal stromal cells
transcription profiling by array
Homo sapiens
12
06/10/2018
64
-
A calcium-induced signaling cascade leading to osteogenic differentiation of human bone marrow-derived mesenchymal stromal cells
transcription profiling by array
Homo sapiens
6
06/10/2018
66
-
Overexpression of spliced XBP1 in in vitro Th2 cells, and comparison to 4u8c treatment
RNA-seq of coding RNA
Mus musculus
30
06/10/2018
-
ENA
51
-
The IRE1a-XBP1 pathway promotes T helper cell differentiation by resolving secretory stress and accelerating proliferation (ChIP-seq)
ChIP-seq
Mus musculus
8
06/10/2018
-
ENA
61
-
Single cell sequencing of 43,168 cells during the differentiation from human induced pluripotent stem cells to cardiomyocytes
RNA-seq of coding RNA from single cells
Homo sapiens
10
06/10/2018
-
71
-
Transcription profiling by array of MG-63 cells grown on different biomaterials used in bone grafts
transcription profiling by array
Homo sapiens
69
05/10/2018
64
-
RNA-seq of group 1 Innate Lymphoid Cells (ILCs) in the mouse uterus and liver
RNA-seq of coding RNA
Mus musculus
13
05/10/2018
-
ENA
46
-
Predicting the therapeutic efficacy of MSC in bone tissue engineering using the molecular marker CADM1
transcription profiling by array
Homo sapiens
72
04/10/2018
43
-
A small molecule approach to engineering vascularized tissue
transcription profiling by array
Homo sapiens
23
04/10/2018
48
-
Zygotic expression after parental early life stress
RNA-seq of coding RNA
Mus musculus
16
03/10/2018
-
ENA
63
-
4-cell embryonic expression after zygotic injection with fragmented sperm long RNA of mice exposed to early life stress
RNA-seq of coding RNA
Mus musculus
8
03/10/2018
-
ENA
60
-
Transcription profiling by array of rat microglial cells grown in C6 glioma cell conditioned media compared to untreated controls at 6, 24 and 48 hours
transcription profiling by array
Rattus norvegicus
12
03/10/2018
-
72
-
Total RNA-seq of Black6/C57 adult mouse sperm including either exposed to early life stress or control conditions
RNA-seq of coding RNA
Mus musculus
11
03/10/2018
-
ENA
54
-
H3K27ac ChIP-Seq of pancreatic islets derived from mice fed a long-term high-fat diet (HFD) against chow-fed controls
ChIP-seq
Mus musculus
2
02/10/2018
ENA
58
-
RNA-Seq of pancreatic islets derived from mice fed a long-term high-fat diet against chow-fed controls
RNA-seq of coding RNA
Mus musculus
2
02/10/2018
ENA
69
-
Reconstructing the human first trimester fetal-maternal interface using single cell transcriptomics - 10x data
RNA-seq of coding RNA
Homo sapiens
31
02/10/2018
ENA
120
-
Transcription profiling by array of palate from mouse embryos expressing activated Smoothened to study the role of Shh signalling during secondary palate development
transcription profiling by array
Mus musculus
6
02/10/2018
51
-
A Transcript and Metabolite Atlas of Blackcurrant Fruit Development Highlights Hormonal Regulation and Reveals the Role of Key Transcription Factors
transcription profiling by array
Ribes nigrum
18
01/10/2018
-
49
-
RNA-sequencing of the mRNA transcriptome in blood, across three time-points in severe psoriasis patients treated with the tumor necrosis factor (TNF) inhibitor, etanercept
RNA-seq of coding RNA
Homo sapiens
30
01/10/2018
ENA
70
-
Transcription profiling by array of pre-cancerous lesions and tumours formed by subcutaneous injection of mtDNA depleted (rho0) 4T1 cells into BALB/c mice recovered at different time points
transcription profiling by array
Mus musculus
24
01/10/2018
-
75
-
Single-cell ATAC-seq of a mixture of three oesophageal tissue (HET1A, OE33, OE19) derived cell lines
ATAC-seq
Homo sapiens
192
01/10/2018
-
ENA
73
-
Response of several cell lines originated from liver, skin and colon to stimulation by IFNg, hyper-IL6, IL27 and OSM, investigated at mRNA level
transcription profiling by array
Homo sapiens
86
01/10/2018
-
78
-
RNA-seq of Streptococcus equi strains with and without csrRS SNPs
RNA-seq of coding RNA
Streptococcus equi
33
01/10/2018
-
ENA
43
-
Mycobacterial tuberculosis infection in hypoxia-inducible factor-1alpha deficient macrophages
transcription profiling by array
Mus musculus
2
30/09/2018
-
45
-
RNA-seq of med14-3 and uvh6-3 mutants in heat stress (37°C) and control stress (23°C), with WT controls. RNA-seq of double mutants: med14-3 or uvh6-3 combined with either ddm1-2 or mom1-2 mutants. Bisulfite-seq of WT samples subjected to control or heat stress. Bisulfite-seq of med14-3 and WT samples in control stress
RNA-seq of coding RNA
Arabidopsis thaliana
22
30/09/2018
-
ENA
52
-
RNA-seq analysis of Coprinopsis cinerea mycelium challenged with gram negative and gram positive bacteria
RNA-seq of coding RNA
Coprinopsis cinerea
9
30/09/2018
ENA
45
-
BRAFV600E FRO cells treated with BRAF inhibitor (vemurafenib) for 4, 15, 24 h
transcription profiling by array
Homo sapiens
12
30/09/2018
107
-
In vivo cleavage rules and target repertoire of RNase III in Escherichia coli
RNA-seq of coding RNA, RNA-seq of non coding RNA
Escherichia coli str. K-12 substr. MG1655
37
30/09/2018
-
ENA
56
-
Single-cell RNA-seq of mouse embryonic stem cells to study the genomic encoding of transcriptional burst kinetics
RNA-seq of coding RNA from single cells
Mus musculus
609
30/09/2018
ENA
60
-
Transcription profiling by array to investigate effect of repeated cigarette exposure on three-dimensional human bronchial epithelial cultures
transcription profiling by array
Homo sapiens
12
30/09/2018
-
74
-
RNA-Seq of neuroblastoma Th-MYCN mouse model, samples sensitive to chemotherapy, and those with chemotherapy resistance
RNA-seq of coding RNA
Mus musculus
9
30/09/2018
-
ENA
67
-
Transcription profiling by array of Anopheles gambiae: Tiassale following Met knockdown by RNA interference
transcription profiling by array
Anopheles gambiae
5
30/09/2018
-
50
-
miRNA profiling of sarcoidosis Treg cells
microRNA profiling by array
Homo sapiens
27
29/09/2018
-
49
-
RNA seq experiment of Treg cells isolated from peripheral blood of patients with pulmonary sarcoidosis compared to Treg cells from peripheral blood of healthy individuals
RNA-seq of coding RNA
Homo sapiens
12
29/09/2018
-
ENA
44
-
The effect of cold and hydrogen peroxide in wheat
transcription profiling by array
Triticum aestivum
24
28/09/2018
-
71
-
High resolution SNP-Array analysis in a Chronic lymphocytic leukemia (CLL) patient
genotyping by array
Homo sapiens
1
28/09/2018
-
104
-
Whole exome sequencing and transcription profiling of a patient cohort of oral cavity squamous cell carcinomas
DNA-seq, RNA-seq of coding RNA
Homo sapiens
86
28/09/2018
-
ENA
228
-
Single-cell RNA-seq profiling of Drosphila melanogaster Rbf mutant third intsar eye discs
RNA-seq of coding RNA from single cells
Drosophila melanogaster
10
27/09/2018
ENA
59
-
Dietary cholesterol promotes fatty liver-associated liver cancer by inducing aberrant genomic expression and mutations
transcription profiling by array
Mus musculus
8
27/09/2018
-
108
-
ChIP-Seq mapping of histone modifications at multiple DNA Double Strand Breaks
ChIP-seq
Homo sapiens
51
27/09/2018
-
ENA
58
-
Investigation of titanium coated imprinted polystyrene surfaces
transcription profiling by array
Homo sapiens
24
25/09/2018
69
-
NGS data from ‘Treatment of a metabolic liver disease by in vivo genome base editing in adult mice’
genotyping by high throughput sequencing
Homo sapiens, Mus musculus
165
25/09/2018
ENA
93
-
The diurnal transcriptional landscape of the microalga Tetradesmus obliquus
RNA-seq of coding RNA
Tetradesmus obliquus
73
24/09/2018
-
ENA
71
-
RNA-sequencing of the mRNA transcriptome in lesional and non-lesional skin, across three time-points in severe psoriasis patients treated with the tumor necrosis factor (TNF) inhibitor, etanercept
RNA-seq of coding RNA
Homo sapiens
59
21/09/2018
ENA
118
-
RNA-sequencing of the small-RNA transcriptome in blood, across three time-points in severe psoriasis patients treated with the tumor necrosis factor (TNF) inhibitor, etanercept
microRNA profiling by high throughput sequencing
Homo sapiens
30
21/09/2018
-
ENA
103
-
Surface topography enhances differentiation of mesenchymal stem cells towards osteogenic and adipogenic lineages
transcription profiling by array
Homo sapiens
9
20/09/2018
75
-
RNA-seq of Chenopodium quinoa salt glands compared to whole leaves with or without salt glands
RNA-seq of coding RNA
Chenopodium quinoa
12
20/09/2018
-
ENA
73
-
Differential gene expression study in brain samples from patients suffering distinct frontotemporal lobar degeneration (FTLD) conditions
transcription profiling by array
Homo sapiens
30
19/09/2018
-
84
-
Bulk segregant analysis of 3D growth defective mutant in Physcomitrella patens (Vx501)
DNA-seq
Physcomitrella patens
4
19/09/2018
-
ENA
76
-
Cell-free serum miRNA signature of synovial sarcoma
transcription profiling by array
Homo sapiens
15
19/09/2018
109
-
RNAseq of murine brown fat, white fat and skeletal muscle
RNA-seq of coding RNA
Mus musculus
9
18/09/2018
-
ENA
99
-
Gene expression microarray of human pulmonary endothelial cells from patients with Chronic Obstructive Pulmonary Disease in comparison with normal controls
transcription profiling by array
Homo sapiens
14
18/09/2018
89
-
RNAseq of murine myoblast used as cell type control
RNA-seq of coding RNA
Mus musculus
3
16/09/2018
-
ENA
117
-
Microarray mRNA data of RPTEC/TERT1 cells exposed to nephrotoxic chemicals ochratoxin A and potassium bromate
transcription profiling by array
Homo sapiens
36
16/09/2018
-
169
-
Differential expression of E. coli(pBIC-1a) under imipenem exposure
RNA-seq of coding RNA
Escherichia coli K-12
6
15/09/2018
-
ENA
132
-
RNA-Seq of sorted and unsorted prophage-induced subpopulations in Corynebacterium glutamicum
RNA-seq of coding RNA
Corynebacterium glutamicum
44
15/09/2018
-
ENA
191
-
Quiescent endothelial cells upregulate fatty acid β-oxidation for vasculoprotection via redox homeostasis
RNA-seq of coding RNA
Mus musculus
6
12/09/2018
-
ENA
134
-
Microarray analysis of mouse cerebral cortex from brain-specific Bmal1 knockout and Per1;Per2 double mutant mice at 2 timepoints
transcription profiling by array
Mus musculus
16
11/09/2018
-
130
-
miRNA microarray of human pulmonary endothelial cells comparing patients with and without Chronic Obstructive Pulmonary Disease
transcription profiling by array
Homo sapiens
21
10/09/2018
132
-
Transcription profiling by array of mouse E15.5 FACS sorted pancreas populations based on double fluorescent reporter (Hes1GFP and Neurog3-RFP), DBA staining and Ptf1a-YFP
transcription profiling by array
Mus musculus
13
10/09/2018
-
130
-
Transcription profiling of healthy rat colonocytes and colonocytes treated with Trinitrobenzenesulfonic acid to investigate colitis
transcription profiling by array
Rattus norvegicus
1
10/09/2018
122
-
Salmonella Typhi adaptation to survival in water
RNA-seq of coding RNA
Salmonella enterica subsp. enterica serovar Typhi
12
07/09/2018
ENA
129
-
The transcriptional regulator TFB-RF1 activates transcription of a putative ABC transporter in Pyrococcus furiosus
ChIP-seq
Pyrococcus furiosus
4
07/09/2018
-
ENA
129
-
Whole-genome resequencing of Pseudomonas aeruginosa PAO1 after anti-virulence treatments targeting iron uptake
genotyping by high throughput sequencing
Pseudomonas aeruginosa
16
07/09/2018
-
ENA
104
-
A five-microRNA-signature predicting recurrence in HNSCC
microRNA profiling by array
Homo sapiens
162
06/09/2018
-
377
-
Investigation of titanium discs produced by Straumann on human mesenchymal stromal cells
transcription profiling by array
Homo sapiens
27
05/09/2018
71
-
RNA-seq of total and polysomal RNA of clk-1(qm30) mutants in Caenorhabditis elegans
RNA-seq of coding RNA
Caenorhabditis elegans
18
05/09/2018
-
ENA
259
-
Global gene expression analysis of H4T80A mutants vs WT H4 in Saccharomyces cerevisiae
RNA-seq of coding RNA
Saccharomyces cerevisiae
24
05/09/2018
ENA
123
-
Promoter Capture Hi-C of mouse ESC and TSC
Hi-C
Mus musculus
4
05/09/2018
ENA
128
-
mRNA profiling by array for pancreatic ductal adenocarcinoma for clinical application
transcription profiling by array
Homo sapiens
309
04/09/2018
349
-
mRNA-seq of human cells lines derived from Papillary thyroid carcinoma (TPC1) transfected with siRNA against BHLHE40 (DEC1) or with scramble control siRNA
RNA-seq of coding RNA
Homo sapiens
4
03/09/2018
-
ENA
180
-
RNA-seq of human melanoma cell line A375 treated with the tetracycline analogs Col-3 or doxycycline against untreated controls
RNA-seq of coding RNA
Homo sapiens
9
01/09/2018
-
ENA
182
-
A role for differential gene regulation in the rapid diversification of melanic plumage coloration in the dark-eyed junco (Junco hyemalis)
RNA-seq of coding RNA
Junco hyemalis
29
01/09/2018
-
ENA
170
-
Transcriptomic profiling of three different neuroblastoma cell lines (CLB-BAR, CLB-GE and SK-N-AS) in response to ALK inhibition
RNA-seq of coding RNA
Homo sapiens
17
01/09/2018
-
ENA
153
-
Differential Regulation of Th17 and Th1 Cells in mouse by Glutaminase-Dependent Metabolism and Chromatin Remodeling
ATAC-seq
Mus musculus
12
01/09/2018
-
ENA
110
-
RNA-seq to investigate gene expression profile associated with long-non coding RNA RAIN in TPC1 cells
RNA-seq of coding RNA
Homo sapiens
6
01/09/2018
-
ENA
113
-
RNAseq of Mucor strains cultured on potato dextrose agar (PDA)
RNA-seq of coding RNA
Mucor circinelloides, Mucor endophyticus, Mucor fuscus, Mucor lanceolatus, Mucor racemosus
5
01/09/2018
-
ENA
68
-
RNA-seq of chicken lines Broiler and Fayoumi bursal transcriptomes in response to heat stress and lipopolysaccharide
RNA-seq of coding RNA
Gallus gallus
62
01/09/2018
-
ENA
81
-
Influence of NSD3 and ESR1 knockdown on gene expression in SUM-44 cells
transcription profiling by array
Homo sapiens
9
01/09/2018
106
-
Copy Number Variation (CNV) analysis of grade III 1p/19q co-deleted glioma
comparative genomic hybridization by array
Homo sapiens
197
01/09/2018
-
213
-
Myeloid lineage switch in pro-B cells generates novel macrophage subsets during homeostasis and inflammation
transcription profiling by array
Mus musculus
30
01/09/2018
68
-
RNA-Seq of A375 cells treated with tetracycline-based crosslinking probes, with and without competition by parent tetracyclines, to show specific binding of the tetracycline analogs Col-3 and doxycycline on rRNA substructures of the human ribosome
RNA-seq of coding RNA
Homo sapiens
18
31/08/2018
-
ENA
105
-
RNA-seq of equine and canine mammary stem cells treated with DMBA
RNA-seq of coding RNA
Canis lupus familiaris, Equus caballus
12
31/08/2018
-
ENA
107
-
miR-196a is able to restore the aggressive phenotype of Annexin A1 CRISPR/Cas9 knock-out pancreatic cancer cells
microRNA profiling by high throughput sequencing
Homo sapiens
6
31/08/2018
-
ENA
96
-
Gene expression in Arabidopsis CAF-1 mutant leaves
transcription profiling by array
Arabidopsis thaliana
9
31/08/2018
-
45
-
CG200745, an HDAC inhibitor, induces anti-tumour effects in cholangiocarcinoma cell lines targeting the Hippo pathway
transcription profiling by array
Homo sapiens
16
31/08/2018
-
111
-
RNA-Seq of A375 cells treated with tetracycline-based crosslinking probes to identify binding sites for the tetracycline analogs Col-3 and doxycycline on the human ribosome
RNA-seq of coding RNA
Homo sapiens
18
30/08/2018
-
ENA
96
-
Expression profiling of K-Ras-driven lung carcinogenesis upon the genetic absence of Enpp2 from pulmonary cells
transcription profiling by array
Mus musculus
6
30/08/2018
-
91
-
Transcriptomic analysis of Responsive and Non-responsive Human NK cells to Plasmodium falciparum-infected red blood cells
transcription profiling by array
Homo sapiens
20
30/08/2018
-
62
-
Human notochordal cell transcriptome in the developing intervertebral disc
transcription profiling by array
Homo sapiens
7
29/08/2018
58
-
Phosphoglycerate dehydrogenase causes electron transport chain defect via impaired heme synthesis: RNA sequencing
RNA-seq of coding RNA
Homo sapiens
6
29/08/2018
-
ENA
72
-
RNAseq of isolated mitotic HeLa cells treated with Actinomycin D
RNA-seq of coding RNA
Homo sapiens
25
28/08/2018
ENA
146
-
RNA-seq of heart left ventricle during myocardial ischemia in TAB-1 knock-in mice compared to wild type controls
RNA-seq of coding RNA
Mus musculus
10
27/08/2018
-
ENA
108
-
Sox2 ChIP-seq in hindbrain and spinal cord neural progenitors differentiated from mouse embryonic stem cells
ChIP-seq
Mus musculus
8
27/08/2018
-
ENA
91
-
ATAC-seq on ESCs undergoing directed differentiation towards defined neural fates
ATAC-seq
Mus musculus
44
27/08/2018
-
ENA
114
-
Illumina microarray analysis of brain regions following acute exposure to bilirubin or LPS
transcription profiling by array
Mus musculus
96
26/08/2018
92
-
Illumina microarray analysis of MCF7 and SHSY5Y cells exposed to bilirubin
transcription profiling by array
Homo sapiens
12
25/08/2018
154
-
RNA-seq of total RNA from human adipose tissue stem cells induced to adipogenesis and osteogenesis for 24 hours
RNA-seq of coding RNA
Homo sapiens
36
24/08/2018
-
ENA
119
-
RNA-seq of coding RNA (polysomal and free fraction) from human adipose tissue stem cells treated with cyclopamine, purmorphamine and DMSO
RNA-seq of coding RNA
Homo sapiens
18
24/08/2018
-
ENA
72
-
RNA seq of Saccharomyces cerevisiae expressing pathways designed to increase ATP or GTP consumption
RNA-seq of coding RNA
Saccharomyces cerevisiae
209
23/08/2018
-
ENA
69
RNA-Seq of developing shoot apical meristems of barley cultivar Golden Promise (null segregant and Ubi::HvFT3 overexpressor) grown under long- and short-day photoperiods
RNA-seq of coding RNA
Hordeum vulgare subsp. vulgare
24
21/08/2018
-
ENA
72
-
Determining open chromatin profiles of a specific population of cells isolated from zebrafish embryos at 10 hours post fertilization using the ATAC-seq method
ATAC-seq
Danio rerio
4
21/08/2018
-
ENA
81
-
RNA-seq of Pseudomonas aeruginosa PAO1 wild-type and mexZ transcriptional regulator knockout mutant
RNA-seq of coding RNA
Pseudomonas aeruginosa PAO1
6
21/08/2018
-
ENA
73
-
RNA-seq of Pdx1-GFP+ sorted E10.5, wildtype and Hes1-/-. Neurog3-dependent Pancreas Dysgenesis Causes Ectopic Pancreas in Hes1 Mutants
RNA-seq of coding RNA
Mus musculus
11
20/08/2018
-
ENA
80
-
Determining single-cell mRNA expression profiles of a specific population isolated from zebrafish embryos at 10 hours post fertilization
RNA-seq of coding RNA from single cells
Danio rerio
102
20/08/2018
-
ENA
85
-
Intestinal expression in murine antibiotic-induced acceleration of Type 1 diabetes
RNA-seq of coding RNA
Mus musculus
66
19/08/2018
-
ENA
108
-
Single cell sequencing of 3 lung carcinomas
RNA-seq of coding RNA from single cells
Homo sapiens
12
18/08/2018
-
ENA
295
-
RNA-seq of IMR-5/75 neuroblastoma cell line treated with JQ1, THZ1 or combination against untreated controls
RNA-seq of coding RNA
Homo sapiens
64
17/08/2018
-
ENA
98
-
Single cell RNA-seq of WTC-CRISPRi human induced pluripotent stem cells
RNA-seq of coding RNA from single cells
Homo sapiens
5
17/08/2018
ENA
214
-
RNA-seq of Arabidopsis thaliana wild-type and a putative chloroplast ribosome biogenesis mutant AtRsgA homozygous knockout
RNA-seq of coding RNA
Arabidopsis thaliana
6
16/08/2018
-
ENA
92
-
Genome-wide analysis reveals that budding yeast Rif1 binds to replication origins and at blocked replication forks to protect nascent DNA
ChIP-seq
Saccharomyces cerevisiae
16
16/08/2018
-
ENA
84
-
RNA-seq of IMR-5/75 neuroblastoma cell line upon TBX2 and/or MYCN knockdown
RNA-seq of coding RNA
Homo sapiens
144
16/08/2018
-
ENA
97
-
RNA-seq of CLB-GA neuroblastoma cell line upon TBX2 knockdown
RNA-seq of coding RNA
Homo sapiens
36
16/08/2018
-
ENA
77
-
ATAC-seq in neuroblastoma IMR-32 cell line
RNA-seq of coding RNA
Homo sapiens
4
16/08/2018
-
ENA
74
-
RNA-seq of cold-induced transcriptome changes in skeletal muscle of beta-adrenergic receptor knockout mice
RNA-seq of coding RNA
Mus musculus
16
16/08/2018
-
ENA
128
RNA-seq of cold-induced transcriptome changes in subcutaneous adipose tissue of beta-adrenergic receptor knockout mice
RNA-seq of coding RNA
Mus musculus
16
16/08/2018
-
ENA
55
RNA-seq of GFP+ (Myod-lineage) progenitor cells versus Tomato+ progenitor cells from inguinal WAT of Myod-driven mTmG reporter mice
RNA-seq of coding RNA
Mus musculus
2
15/08/2018
-
ENA
68
-
Myod-lineage beige adipose tissue identification
RNA-seq of coding RNA
Mus musculus
6
15/08/2018
-
ENA
68
-
RNA-Seq of T cells sorted from human PBMCs, or from T cells stimulated with CD3/CD28 beads for 4 days, or from the spleen of NSG or NSG-HLA-A2/HHD mice, 7 days after transplantation with human PBMCs
RNA-seq of coding RNA
Homo sapiens
68
14/08/2018
-
ENA
77
-
Whole exome sequencing analyses of human, IDH2-mutated, acute myeloid leukemia samples from patients before or during treatment with Enasidenib
DNA-seq
Homo sapiens
47
13/08/2018
-
ENA
142
-
ChIP-seq of tumour associated macrophages derived from high grade ovarian serous carcinoma patient ascites
ChIP-seq
Homo sapiens
9
13/08/2018
-
ENA
123
-
Bioinformatics-based selection of a model cell type for in vitro biomaterial testing
transcription profiling by array
Homo sapiens
54
12/08/2018
185
-
9-(S)-HODE treatment of Drosophila S2 cells
transcription profiling by array
Drosophila melanogaster
4
12/08/2018
-
64
-
Microarray analysis for leaves of Arabidopsis thaliana Col-0 plants fumigated with nitrogen dioxide (treatment) or air (control)
transcription profiling by array
Arabidopsis thaliana
16
10/08/2018
71
-
In vitro systems toxicology-based assessment of the potential modified risk tobacco product CHTP1.2 for vascular inflammation- and cytotoxicity-associated mechanisms promoting adhesion of monocytic cells to human coronary arterial endothelial cells
transcription profiling by array
Homo sapiens
104
09/08/2018
57
-
RNA-seq of human ASCs expanded with 10% FBS and in FBS-deprived condition
RNA-seq of coding RNA
Homo sapiens
10
09/08/2018
ENA
65
-
miRNA-seq of human ASCs expanded with 10% FBS and in FBS-deprived condition
microRNA profiling by high throughput sequencing
Homo sapiens
10
09/08/2018
ENA
56
-
RNA sequencing of human, IDH2-mutated, acute myeloid leukemia samples from patients before or during treatment with Enasidenib
RNA-seq of coding RNA
Homo sapiens
4
08/08/2018
-
ENA
100
-
RNA-seq of rat microglia, mouse neurons and human astrocytes in co-culture, both in control conditions and challenged with LPS
RNA-seq of coding RNA
mixed sample
36
08/08/2018
-
ENA
62
-
Effect of MHC II expression in pro-B cells: Pre-B cells and follicular B cells from wild-type and MHC II conditional mice
RNA-seq of coding RNA
Mus musculus
16
07/08/2018
-
ENA
73
Effect of MHC II expression in pro-B cells: F6 leukaemic cell line
RNA-seq of coding RNA
Mus musculus
6
07/08/2018
-
ENA
118
-
Identification of Angustifolia 3 (ZmAN3) target genes through GSyellow-based ChIP-seq in Zea mays leaves
ChIP-seq
Zea mays
4
07/08/2018
-
ENA
65
-
Identification of Peopod2 (PPD2) target genes through GSyellow-based ChIP-seq in Arabidopsis thaliana PSB-D cell cultures
ChIP-seq
Arabidopsis thaliana
5
07/08/2018
-
ENA
65
-
Ribosome profiling of CLL patient samples
RNA-seq of coding RNA
Homo sapiens
14
07/08/2018
-
ENA
118
-
Next Generation Sequencing Transcriptomic Analysis (RNA-seq) of Thoroughbred horse at rest, after exercise and after training
RNA-seq of coding RNA
Equus caballus
61
07/08/2018
-
ENA
54
-
RNA-seq of one human cortex sample and one sample from the HAP1 cell line, used to illustrate the development and application of the JCC score
RNA-seq of coding RNA
Homo sapiens
2
06/08/2018
-
ENA
95
-
JAK2V617F mutant HSC microarray
transcription profiling by array
Mus musculus
9
06/08/2018
57
-
Diverse effects of cyclic AMP variants on osteogenic and adipogenic differentiation of human mesenchymal stromal cells
transcription profiling by array
Homo sapiens
18
05/08/2018
46
-
Full transcriptome analysis of MCF-7 cells treated with screening hit compounds versus control
transcription profiling by array
Homo sapiens
35
04/08/2018
-
97
-
Transcriptomic profile of human induced pluripotent stem cells at single cell resolution
RNA-seq of coding RNA from single cells
Homo sapiens
2
04/08/2018
-
42
-
RNA sequencing of CD57+ and CD57- effector memory CD8 T cells in patients with type 1 diabetes
RNA-seq of coding RNA
Homo sapiens
10
03/08/2018
-
ENA
51
-
The effects of endurance exercise and diet on atherosclerosis in young and aged ApoE-/- and WT mice
transcription profiling by array
Mus musculus
48
02/08/2018
46
-
RNAseq of Mercurialis annua control and selected lines after four generations of selection for increased male allocation in females
RNA-seq of coding RNA
Mercurialis annua
24
01/08/2018
-
ENA
50
-
Metatranscriptome of surface gravel plain soils from the hyperarid Central Namib Desert
RNA-seq of coding RNA
soil metagenome
12
01/08/2018
-
ENA
48
-
Velvet domain protein VosA represses the zinc cluster transcription factor SclB regulatory network for Aspergillus nidulans asexual development, oxidative stress response and secondary metabolism
RNA-seq of coding RNA
Aspergillus nidulans
9
31/07/2018
-
ENA
55
-
Microarray of tolerogenic dendritic cells differentiated in the presence of vitamin D3, dexamethasone or rapamycin
transcription profiling by array
Homo sapiens
25
31/07/2018
54
-
Bulk-cell RNA-seq analysis of early cutaneous wound healing in mouse
RNA-seq of coding RNA
Mus musculus
9
31/07/2018
-
ENA
50
-
TCR repertoire analysis by Next-generation sequencing of mouse CD8+ T cells in spleen or tumor
RNA-seq of coding RNA
Mus musculus
16
31/07/2018
-
ENA
44
-
Gene transcription profiling of Physcomitrella patens Pp_A_Doko#069 (DOKO69; Koprivova et al., 2004) protonema grown in liquid cultures
transcription profiling by array
Physcomitrella patens
3
31/07/2018
54
-
Whole transcriptome profiling of the steady state and Hh-treated (8 hrs) Alpk1+/- (heterozygous) and Alpk1-/- (knockout) BMDMs using RNA-Sequencing approach
RNA-seq of coding RNA
Mus musculus
12
30/07/2018
-
ENA
45
-
Transcriptome profiling of gene expression in the colon tissues of steady state and Helicobacter hepaticus-infected 129SvEvS6.Rag2−/− mice and the congenic strain 129.C3B.Rag2−/− R17
transcription profiling by array
Mus musculus
24
30/07/2018
-
92
-
Bulk RNA-sequencing of self-maintaining versus monocyte-replaced gut macrophages
RNA-seq of coding RNA
Mus musculus
62
30/07/2018
ENA
74
-
Single-cell RNA sequencing of self-maintaining lamina propria macrophages
RNA-seq of coding RNA from single cells
Mus musculus
1
30/07/2018
-
ENA
70
-
H3K14ac is linked to methylation of H3K9 by the Tudor domains of SETDB1
ChIP-seq
Mus musculus
6
30/07/2018
-
ENA
60
-
Transcriptome of the liver in 15-day-old C3H/HeJ mice
RNA-seq of coding RNA
Mus musculus
20
29/07/2018
ENA
95
-
Transcriptome profiles of C3H/HeJ mouse liver tumours
RNA-seq of coding RNA
Mus musculus
200
29/07/2018
ENA
111
-
Comparison of a resistant field population of Anopheles gambiae ss collected in Tiefora, Burkina Faso (2014) compared to a lab susceptible ss Anopheles gambiae Kisumu
transcription profiling by array
Anopheles gambiae
3
29/07/2018
-
56
-
Comparison of a resistant population of Anopheles gambiae ss, from Tiefora Burkina Faso, to a lab susceptible An. gambiae ss Kisumu
transcription profiling by array
Anopheles gambiae
4
29/07/2018
-
55
-
Comparison of a resistant field Anopheles coluzzii population from Banfora, Burkina Faso to lab susceptible N'Gousso 2014
transcription profiling by array
Anopheles gambiae
4
29/07/2018
-
59
-
Molecular profiling of Ctcf hemizygous mouse embryonic fibroblasts: HiC
Hi-C
Mus musculus
6
29/07/2018
-
ENA
59
-
Molecular profiling of Ctcf hemizygous mouse embryonic fibroblasts: ChIP-seq
ChIP-seq
Mus musculus
48
29/07/2018
ENA
74
-
Molecular profiling of Ctcf hemizygous mouse embryonic fibroblasts: RNA-seq
RNA-seq of coding RNA
Mus musculus
12
29/07/2018
ENA
68
-
RNA-seq of pooled ambystoma mexicanum tissues derived from a mix of developmental stages
RNA-seq of coding RNA
Ambystoma mexicanum
8
29/07/2018
-
ENA
53
-
APIM treatment of different cancer cell lines, short and long term
transcription profiling by array
Homo sapiens
168
29/07/2018
-
142
-
RNA-seq of hepatic biopsies taken from patients with chronic liver disease presenting with different aetiologies (HCV, FLD) and fibrosis stages
RNA-seq of coding RNA
Homo sapiens
69
28/07/2018
ENA
101
-
Microarray for duodenum epithelium of C57Bl6 PPARgVillinCRE and wild type mice submitted to 2 weeks 75% caloric restriction compared to ad libitum fed controls
transcription profiling by array
Mus musculus
12
27/07/2018
61
Single-cell RNA-seq of naive and primed human embryonic stem cells
RNA-seq of coding RNA from single cells
Homo sapiens
2687
26/07/2018
ENA
72
-
RNA-seq of mouse macrophages to investigate how interferon gene therapy reprograms the leukemia microenvironment
RNA-seq of coding RNA
Mus musculus
11
26/07/2018
-
ENA
100
-
Interferon gene therapy reprograms the leukemia microenvironment inducing protective immunity to multiple tumor antigens
RNA-seq of coding RNA from single cells
Mus musculus
5
25/07/2018
-
-
104
-
Time series experiment on L4 stage of Caenorhabditis elegans N2
transcription profiling by array
Caenorhabditis elegans
10
24/07/2018
-
58
-
HumanMethylation450 (450k) data for 79 rheumatoid arthritis disease discordant monozygotic twin pairs
methylation profiling by array
Homo sapiens
316
24/07/2018
-
59
-
Small RNA-seq analysis of single porcine blastocysts revealed that maternal estradiol-17beta exposure does not affect miRNA isoform (isomiR) expression
microRNA profiling by high throughput sequencing
Sus scrofa
36
23/07/2018
ENA
84
-
24h time-course microarray study of SW480 and SW620 cells
transcription profiling by array
Homo sapiens
18
23/07/2018
-
97
-
Various evolutionary trajectories lead to loss of activity of tobramycin-potentiating compounds in Burkholderia cenocepacia biofilms
DNA-seq
Burkholderia cenocepacia
12
22/07/2018
-
ENA
80
-
Transcriptome analysis of HeLa cells upon deprivation of methionine and cysteine (Met/Cys)
RNA-seq of coding RNA
Homo sapiens
8
21/07/2018
-
ENA
118
-
Effect of the IRE1a-XBP1 pathway inhibition during T helper 2 differentiation
RNA-seq of coding RNA
Mus musculus
8
20/07/2018
-
ENA
57
-
Transcription profiling by array of B lymphoblasts derived from either control donors or patients with loss of function mutations in TTC7A
transcription profiling by array
Homo sapiens
10
19/07/2018
-
65
-
Klhl6 deficiency impairs transitional B cell survival and differentiation
transcription profiling by array
Mus musculus
12
17/07/2018
-
102
Single-cell RNA-seq of of human dermal fibroblasts (supplementary - different stimulation conditions of dsRNA)
RNA-seq of coding RNA from single cells
Homo sapiens
1920
16/07/2018
ENA
85
-
Single-cell RNA-seq of dermal fibroblasts (5 human individuals - IFNB stimulation)
RNA-seq of coding RNA from single cells
Homo sapiens
681
16/07/2018
ENA
107
-
Single-cell RNA-seq of of dermal fibroblasts (supplementary - human fibroblasts stimulation with dsRNA)
RNA-seq of coding RNA from single cells
Homo sapiens
590
16/07/2018
ENA
91
-
Bulk RNA-seq of of human dermal fibroblasts from up to 66 individuals (supplementary)
RNA-seq of coding RNA
Homo sapiens
168
16/07/2018
ENA
100
-
Single-cell RNA-seq of of bone marrow derived mononuclear phagocytes derived from mouse; rat; rabbit or pig
RNA-seq of coding RNA from single cells
Mus musculus, Oryctolagus cuniculus, Rattus norvegicus, Sus scrofa
68
16/07/2018
ENA
125
-
Transcriptome of Trypanosome brucei after PUF2 Knock-down - polysome fractions
RNA-seq of coding RNA
Trypanosoma brucei
3
16/07/2018
-
ENA
73
-
RNA-seq of mouse EL4 cells overexpressing Israa gene product in comparison with Mock-transfected control cells
RNA-seq of coding RNA
Mus musculus
2
15/07/2018
-
ENA
99
-
Transcriptomic effects of long-term pantethine treatment in the mouse Alzheimer's disease 5XFAD model
transcription profiling by array
Mus musculus
12
15/07/2018
-
73
-
RNA-seq of human neurons derived from H9 embryonic stem cell lines treated with BDNF, TrkB agonist ZEB 85 or NT4 against untreated controls
RNA-seq of coding RNA
Homo sapiens
192
13/07/2018
ENA
115
-
RNA-seq of mouse heart that is both heart SOD2 knockout and deficient for mitochondrial DNA repair
RNA-seq of coding RNA
Mus musculus
19
13/07/2018
-
ENA
84
-
DNA-seq of mitochondrial DNA from mouse heart that is both heart SOD2 knockout and deficient for mitochondrial DNA repair
DNA-seq
Mus musculus
43
13/07/2018
-
ENA
87
-
DNA-seq of mitochondrial DNA from liver of OGG1 and MUTYH deficient mice that have been bred for five consecutive generations
DNA-seq
Mus musculus
30
13/07/2018
-
ENA
75
-
Binding of the Zika virus genome to endogenous human transcripts
RNA-seq of non coding RNA
Homo sapiens
18
13/07/2018
-
ENA
87
-
Whole-exome sequencing of genomic DNA extracted from patient-derived melanoma cell lines grown in vitro
DNA-seq
Homo sapiens
8
12/07/2018
ENA
105
-
miRNA profiling array results in serum RNA (healthy volunteers and breast tumor patients)
microRNA profiling by array
Homo sapiens
7
12/07/2018
-
106
-
Promoter capture and whole genome in situ Hi-C of human iPSC and iPSC-derived cardiomyocytes from an Yoruban individual (NA19101)
Hi-C
Homo sapiens
12
11/07/2018
ENA
99
-
Gene expression profiling by RNA-seq of human iPSC and iPSC-derived cardiomyocytes from an Yoruban individual (NA19101)
RNA-seq of coding RNA
Homo sapiens
6
11/07/2018
ENA
92
-
RNA libraries of sorted CD8+ memory T cells from the spleen and RNA libraries of sorted IELs from the small intestine of C57BL/6J mice
RNA-seq of coding RNA
Mus musculus
6
10/07/2018
-
ENA
69
-
iPSC-derived macrophages effectively treat pulmonary alveolar proteinosis in Csf2rb-deficient mice
RNA-seq of coding RNA
Mus musculus
10
10/07/2018
ENA
82
-
RNA-seq of human skin lesions diagnosed as actinic keratosis, intraepidermal carcinoma or squamous cell carcinoma
RNA-seq of coding RNA
Homo sapiens
25
09/07/2018
ENA
110
-
Massively parallel single-cell RNA-sequencing of K14E7 transgenic and wildtype C57BL/6 mice
RNA-seq of coding RNA from single cells
Mus musculus
4
09/07/2018
ENA
60
-
RNA-seq of metabolically labelled RNA by 4-thiouracil from mouse tissues
RNA-seq of coding RNA
Mus musculus
18
09/07/2018
-
ENA
54
-
Single cell sequencing of lung carcinoma
RNA-seq of coding RNA from single cells
Homo sapiens
19
09/07/2018
-
308
-
SNP array Multi-omics molecular profiling of primary prostate adenocarcinoma
genotyping by array
Homo sapiens
66
09/07/2018
-
87
-
SCRB-seq comparison with TruSeq on bulk RNA-seq human LCL (DMSO) and BAY treated LCL (BAY)
RNA-seq of coding RNA
Homo sapiens
12
07/07/2018
-
ENA
62
-
Single-cell RNA-seq of ex vivo CD45-negative skin resident-cells using microfluidic droplet capture
RNA-seq of coding RNA
Homo sapiens
8
06/07/2018
-
80
-
Bulk RNA-seq of of bone marrow derived mononuclear phagocytes
RNA-seq of coding RNA
Mus musculus, Oryctolagus cuniculus, Rattus norvegicus, Sus scrofa
73
06/07/2018
-
ENA
76
-
Single-cell RNA-seq of dermal fibroblasts stimulated with dsRNA (poly I:C) in a time course of 0, 4 and 8 hours
RNA-seq of coding RNA from single cells
Homo sapiens, Macaca mulatta, Mus musculus, Rattus norvegicus
240
06/07/2018
ENA
81
-
Single-cell RNA-seq of of dermal fibroblasts using microfluidic droplet capture (stimulated cells)
RNA-seq of coding RNA from single cells
Homo sapiens
2130
06/07/2018
ENA
75
-
Single-cell RNA-seq of of dermal fibroblasts using microfluidic droplet capture (unstimulated cells)
RNA-seq of coding RNA from single cells
Homo sapiens
2553
06/07/2018
ENA
74
-
Single-cell RNA-seq of dermal fibroblasts stimulated with dsRNA (poly I:C) in a time course of 0, 2, 4 and 8 hours
RNA-seq of coding RNA from single cells
Homo sapiens, Macaca mulatta, Mus musculus, Rattus norvegicus
728
06/07/2018
ENA
71
-
Bulk RNA-seq of dermal fibroblasts after stimulation with interferon or dsRNA (poly I:C)
RNA-seq of coding RNA
Homo sapiens, Macaca mulatta, Mus musculus, Rattus norvegicus
79
06/07/2018
ENA
67
-
ChIP-seq of H3K4me3 and H3K27ac of dermal fibroblasts with and without dsRNA (poly I:C) stimulation
ChIP-seq
Homo sapiens, Macaca mulatta, Mus musculus, Rattus norvegicus
52
06/07/2018
ENA
74
-
The effect of high cholesterol diet on expression level of myocardial microRNAs
microRNA profiling by array
Rattus norvegicus
6
06/07/2018
-
54
-
ChIP-Seq of BCL11A and SOX2 in lung squamous cell carcinoma (LUSC) LK-2 cell line with or without BCL11A knockdown
ChIP-seq
Homo sapiens
5
05/07/2018
ENA
104
-
The gut microbiota promotes hepatic fatty acid desaturation and elongation in mice
transcription profiling by array
Mus musculus
12
05/07/2018
-
58
-
RNA-seq experiment of isolated endothelial and microglial cells from hippocampal DG and CA1 regions under control and VEGF overexpression conditions
RNA-seq of coding RNA
Mus musculus
16
04/07/2018
ENA
54
-
Transcriptional response to Rosiglitazone in adipocyte progenitors isolated from WT and Cited4-KO scWAT
transcription profiling by array
Mus musculus
12
04/07/2018
-
48
Transcriptomic profiling of human neuromesodermal-like cells and spinal cord progenitors derived in vitro from H9 ES cell line
RNA-seq of coding RNA
Homo sapiens
6
04/07/2018
ENA
61
-
RNA-seq of primary human M2-polarized macrophages cultured in either high-concentration or low-concentration type I collagen
RNA-seq of coding RNA
Homo sapiens
6
04/07/2018
ENA
68
-
RNAseq of the human gut commensal Bacteroides thetaiotaomicron wildtype, bt0700 and bt0700 bt3998 (ppGpp0) strains across three conditions: glucose minimal medium, 1h of carbon starvation, and mouse gut colonization
RNA-seq of coding RNA
Bacteroides thetaiotaomicron VPI-5482
29
04/07/2018
ENA
58
-
RNA-seq analysis of anti-malarial drug chemotherapy of murine experimental Cerebral Malaria (ECM)
RNA-seq of coding RNA
Mus musculus
39
03/07/2018
-
ENA
59
SNP array profiling of leiomyosarcoma
transcription profiling by array
Homo sapiens
26
02/07/2018
-
86
-
Identification of driver genes in uterine leiomyosarcoma: whole-genome sequencing
DNA-seq
Homo sapiens
4
02/07/2018
-
85
-
Identification of driver genes in uterine leiomyosarcoma: low-coverage WGS
DNA-seq
Homo sapiens
35
02/07/2018
-
ENA
94
-
Identification of driver genes in uterine leiomyosarcoma: RNA seq
RNA-seq of coding RNA
Homo sapiens
30
02/07/2018
-
ENA
90
RNA-seq of Fusarium graminearum under predation by the springtail Folsomia candida against untreated controls
RNA-seq of coding RNA
Fusarium graminearum
8
01/07/2018
-
ENA
54
-
RNA-seq of Streptococcus pyogenes biofilms
RNA-seq of coding RNA
Streptococcus pyogenes
18
01/07/2018
-
ENA
51
-
RNAseq of human bone marrow mesenchymal stem cells in co-culture with endothelial cells
RNA-seq of coding RNA
Homo sapiens
6
01/07/2018
-
ENA
61
-
Meiotic crossover landscape within the RAC1 disease resistance gene
DNA-seq
Arabidopsis thaliana
10
01/07/2018
-
ENA
50
-
Whole-genome shallow-sequencing of HPV-positive and HPV-negative vulvar lesions
DNA-seq
Homo sapiens
86
01/07/2018
ENA
64
-
Transcription profiling of irradiated non-adherent anoikis-resistant DU145 and MCF-7 cells and 5-azacytidine-treated non-adherent anoikis-resistant HeLa cells in contrast to control (non-irradiated, non-treated) cells
transcription profiling by array
Homo sapiens
26
01/07/2018
-
53
-
Development of a small molecule for treatment of castration resistant prostate cancer via androgen receptor and IL6/STAT3 pathways
transcription profiling by array
Homo sapiens
12
01/07/2018
-
64
Microarray of four types of mouse immune samples including those of the spleen (SP), bone marrow (BM), lymph node (LN), and peripheral blood mononuclear cell (PBMC) and three tumor tissues including MC38, EL4 and LLC
transcription profiling by array
Mus musculus
21
30/06/2018
-
83
-
Ribosome profiling of budding yeast Saccharomyces cerevisiae in eEF3 depleted conditions
RNA-seq of coding RNA
Saccharomyces cerevisiae
8
30/06/2018
-
ENA
42
-
DNA methylation in acute sleep loss in humans
transcription profiling by array
Homo sapiens
60
30/06/2018
-
46
-
RNA-seq in acute sleep loss in humans
RNA-seq of coding RNA
Homo sapiens
60
30/06/2018
-
40
-
RNA-seq comparison of gene expression in enteroids derived of fresh or frozen human intestinal biopsies
RNA-seq of coding RNA
Homo sapiens
129
30/06/2018
-
ENA
53
RNA-seq of Staphylococcus aureus and Staphylococcus aureus challenged with squalene compared to control growth
RNA-seq of coding RNA
Staphylococcus aureus, Staphylococcus epidermidis
12
30/06/2018
ENA
40
-
CXCR3+ Treg cells suppress Th1-immune responses through expression of the co-inhibitory receptors CD85k and Lag-3
RNA-seq of coding RNA
Mus musculus
7
30/06/2018
-
ENA
40
-
Transcription profiling by array of the effect of rapamycin on Anopheles gambiae strains 2La or 2L+
transcription profiling by array
Anopheles gambiae
6
30/06/2018
-
43
-
Analysis of Zika Virus gene expression by Ribosome profiling and RNA sequencing
RNA-seq of coding RNA
Aedes albopictus, Chlorocebus sabaeus
10
30/06/2018
-
ENA
54
-
ChIP-Seq (H3K4me3, H3K27me3) of steady-state splenic classical dendritic cells from wild type, germ-free and IFNAR knockout mice
ChIP-seq
Mus musculus
18
30/06/2018
-
ENA
46
-
RNA-Seq of steady-state and LPS stimulated splenic classical dendritic cells from wild type, germ-free and IFNAR knockout mice
RNA-seq of coding RNA
Mus musculus
12
30/06/2018
-
ENA
45
-
Mutation in familial platelet disorder with predisposition to myeloid malignancies
DNA-seq
Homo sapiens
1
29/06/2018
-
ENA
70
-
RNA-seq of Candida intermedia growing in different media
RNA-seq of coding RNA
[Candida] intermedia
41
29/06/2018
-
ENA
45
-
RNA-seq of mouse crypts to investigate Rorc gamma t-deficient mice tissue repair compared to wild type controls
RNA-seq of coding RNA
Mus musculus
24
29/06/2018
-
ENA
42
-
Transcriptome profiling of Sinorhizobium meliloti Rm1021 grown in semisolid media (MM) in presence of 2-tridecanone (2-TDC)
transcription profiling by array
Sinorhizobium meliloti
3
29/06/2018
-
44
-
Gene expression profile of microdissected mucinous cystic neoplasms of the pancreas
transcription profiling by array
Homo sapiens
6
28/06/2018
-
50
-
Gene-expression profile of human embryonic germ cells
transcription profiling by array
Homo sapiens
11
28/06/2018
-
78
-
Gene expression profile of microdissected mucinous ovarian tumors
transcription profiling by array
Homo sapiens
17
28/06/2018
-
67
-
Anopheles coluzzii small RNAseq
RNA-seq of non coding RNA
Anopheles coluzzii
16
28/06/2018
-
ENA
49
-
Anopheles coluzzii RNAseq
RNA-seq of coding RNA
Anopheles coluzzii
16
28/06/2018
-
ENA
50
-
Molecular Profiling of Chemoresistant Slow Cycling Cancer-Initiating Cells from human colorectal cancer, glioma and melanoma
transcription profiling by array
Homo sapiens
79
28/06/2018
72
-
Mapping hnRNP H binding sites on RON wildtype minigene and RON mutant minigenes via iCLIP
CLIP-seq
Homo sapiens
10
27/06/2018
-
ENA
56
-
Mapping hnRNP H binding sites on the RON wildtype minigene via iCLIP
CLIP-seq
Homo sapiens
2
27/06/2018
-
ENA
58
-
DNA-seq of a library of mutated minigene reporters
DNA-seq
Homo sapiens
2
27/06/2018
-
ENA
58
-
RNA-seq of the spliced products from a mutated minigene reporter library under control and hnRNP H knockdown conditions in MCF-7 cells
RNA-seq of coding RNA
Homo sapiens
6
27/06/2018
-
ENA
79
-
RNA-seq of the spliced products from a mutated minigene reporter library in HEK293T cells
RNA-seq of coding RNA
Homo sapiens
3
27/06/2018
-
ENA
57
-
Lotus japonicus response to Nod factor: wild type and nfre mutants
RNA-seq of coding RNA
Lotus japonicus
12
27/06/2018
-
ENA
63
-
RNA-seq of hepatocytes obtained through step-wise differentiation of hIPSCs from a patient with A1AT deficiency and its point mutation-corrected isogenic hIPSC line. Comparison to primary hepatocytes from a healthy donor and an A1AT-deficient patient
RNA-seq of coding RNA
Homo sapiens
8
26/06/2018
-
ENA
52
-
Expression data from draining lymph node and muscle of mice immunised with AS03 or PBS
transcription profiling by array
Mus musculus
35
26/06/2018
-
51
Gene expression profiling of patient-derived glioblastoma stem cell cultures
transcription profiling by array
Homo sapiens
16
26/06/2018
-
83
-
RNA-seq of Bacillus subtilis (i) sigI-rsgI knock-out strain, (ii) rsgI disrupted strain, and (iii) wt strains during growth at 52°C and 37°C
RNA-seq of coding RNA
Bacillus subtilis subsp. subtilis str. 168
18
26/06/2018
-
ENA
64
-
RNA-Seq of RAW 264.7 cells stimulated with the AS03 adjuvant after 4 and 8 hours
RNA-seq of coding RNA
Mus musculus
48
26/06/2018
ENA
61
Single-cell RNA-seq data of mammary gland epithelial cells from different gestational stages to detect and remove barcode swapping
RNA-seq of coding RNA from single cells
Mus musculus
160
25/06/2018
ENA
96
-
ChIP-seq analysis of bZIP73 binding sites in rice seedlings (Zhonghua11)
ChIP-seq
Oryza sativa Japonica Group
4
25/06/2018
-
ENA
43
-
NAT10 inhibition improves cellular phenotypes of Hutchinson-Gilford progeria syndrome by restoring the Transportin-1 pathway
transcription profiling by array
Homo sapiens
36
25/06/2018
-
44
-
Single-cell RNA sequencing of OT-I CD8+ T cells after stimulation with different affinity ligands
RNA-seq of coding RNA
Mus musculus
952
25/06/2018
ENA
77
-
ChIP-seq for Prep on whole zebrafish embryos at 3.5 and 12hpf
ChIP-seq
Danio rerio
8
25/06/2018
ENA
45
-
Foxp3+ regulatory T cells control psoriasiform skin inflammation by restraining a type 1 interferon driven CD8+ T cell response
transcription profiling by array
Mus musculus
18
24/06/2018
-
53
-
Transcriptomic analysis of the developing cerebellum in a mouse model for SRD5A3-CDG
transcription profiling by array
Mus musculus
8
24/06/2018
-
59
-
Methylation array for Multi-omics molecular profiling of primary prostate adenocarcinoma
methylation profiling by array
Homo sapiens
390
24/06/2018
66
-
Expression array for Multi-omics molecular profiling of primary prostate adenocarcinoma
transcription profiling by array
Homo sapiens
141
24/06/2018
-
78
-
SNP array for Multi-omics molecular profiling of primary prostate adenocarcinoma
genotyping by array
Homo sapiens
132
24/06/2018
-
88
-
Gene expression profiles of human breast cancer cell lines MCF-7, T47D and MDA-MB-231 co-cultured with 3T3-L1 adipocytes
transcription profiling by array
Homo sapiens
18
22/06/2018
90
-