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AccessionTitleTypeOrganismAssaysReleasedProcessedRawViewsAtlas
RNA-Seq analysis of an industry isolated Pseudomonas aeruginosa strain following exposure to preservatives and product formulations
RNA-seq of coding RNA
Pseudomonas aeruginosa
32
20/01/2018
-
ENA
15
-
Transcriptional profiling by array of chronic myeloid leukaemia (CML) stem/progenitor cells (CD34+38-) treated with tyrosine kinase inhibitors (imatinib, dasatinib and nilotinib) at different time points (8 hours and 7 days) against untreated controls
transcription profiling by array
Homo sapiens
49
20/01/2018
-
275
-
Time-lapse Deep-seq of E. coli Metabolite Production Pathway
DNA-seq
Escherichia coli K-12
26
19/01/2018
-
ENA
22
-
Genome-wide characterisation of DNA methylation in an invasive Lepidopteran pest, the cotton bollworm Helicoverpa armigera
methylation profiling by high throughput sequencing
Helicoverpa armigera
1
19/01/2018
-
ENA
11
-
RNA-seq transcriptome profiling of the psychrophilic diatom Fragilariopsis cylindrus under six treatments simulating conditions within sea ice
RNA-seq of coding RNA
Fragilariopsis cylindrus
15
18/01/2018
-
ENA
12
-
Ribosome profiling of the retrovirus murine leukemia virus in Rat2 cells
RNA-seq of coding RNA
Rattus norvegicus
9
17/01/2018
-
ENA
29
-
Transcription profiling by array of oral squamous cell cancer (OSCC) surgical margins defined by narrow band imaging
transcription profiling by array
Homo sapiens
49
17/01/2018
33
-
RNA-seq of human normal mammary gland cells FACS sorted into three populations: ALDH+, ALDH-CD44+CD24-, and ALDH-CD44-CD24+
RNA-seq of coding RNA
Homo sapiens
9
17/01/2018
-
ENA
10
-
microRNA profiling by array of paired samples tumor tissue/normal adjacent tissue from colon cancer patients
microRNA profiling by array
Homo sapiens
10
17/01/2018
-
17
-
MicroRNA analysis in HPV-positive and HPV-negative cervical cancer cell lines
microRNA profiling by array
Homo sapiens
6
16/01/2018
-
19
-
MicroRNA expression profile in human foreskin keratinocytes (HFKs) transduced with retroviral vectors carrying E6 and E7 genes of either HPV6 or HPV16 and with the LXSN empty vector
microRNA profiling by array
Homo sapiens
23
16/01/2018
-
17
-
Transcriptional profiling of triple-negative breast cancer cell lines treated with OTX015
transcription profiling by array
Homo sapiens
11
16/01/2018
27
-
Effect of HE4 overexpression or treatment with recombinant HE4 protein on OVCAR8 ovarian cancer cells
transcription profiling by array
Homo sapiens
12
15/01/2018
26
-
Transcription profiling by array of U-2987-MG glioma derived cell line to investigate the effect of Snail1 overexpression compared to control
transcription profiling by array
Homo sapiens
8
15/01/2018
-
30
-
RNA-seq of platelets derived from blood of healthy human donors in response to physiological stimuli collagen or Thrombin Receptor Activating Peptide compared to untreated controls
RNA-seq of coding RNA
Homo sapiens
9
15/01/2018
-
ENA
13
-
Whole transcriptome profiling by microarray of monocytes stimulated with LPS and treated with trabectedin, lurbinectedin or doxorubicin
transcription profiling by array
Homo sapiens
16
15/01/2018
16
-
Transcription profiling by array of carcinoma-stem-like cells (CSC) extracted from a primary ovarian cancer cell line
transcription profiling by array
Homo sapiens
6
15/01/2018
10
-
Comparative transcriptomics of Rhizobium mesoamericanum STM3625, Cupriavidus taiwanensis LMG19424 and Burkholderia phymatum STM815 when induced by root exudates of Mimosa pudica
RNA-seq of coding RNA
Burkholderia phymatum STM815, Cupriavidus taiwanensis LMG 19424, Rhizobium mesoamericanum STM3625
18
15/01/2018
-
ENA
16
-
microRNA expression profiling of CML and normal quiescent cells
microRNA profiling by array
Homo sapiens
10
12/01/2018
-
37
-
Immune transcriptional profiling in end-stage renal disease
transcription profiling by array
Homo sapiens
480
11/01/2018
50
-
Dry seed transcriptome differences associated with relief of sly1-2 seed dormancy through after-ripening or overexpression of the gibberellin-receptor GID1b
transcription profiling by array
Arabidopsis thaliana
12
10/01/2018
42
-
Fibroblasts potentiate melanoma cells in vitro invasivity induced by UV-irradiated keratinocytes - transcription profiling
transcription profiling by array
Homo sapiens
10
10/01/2018
-
32
-
Targeted next generation sequencing of cfDNA from lung cancer patients enrolled in the GALAXY-1 trial (NCT01348126)
DNA-seq
Homo sapiens
306
10/01/2018
-
ENA
45
-
High resolution survey of drought, high salinity, heat and cold stress-induced transcriptome of bioenergy feedstock model plant western poplar (Populus trichocarpa) accession Nisqually-1
RNA-seq of coding RNA
Populus trichocarpa
81
10/01/2018
-
ENA
40
-
Transgenic expression of BEN, a member of TFII-I family, in various murine adipose tissues
RNA-seq of coding RNA
Mus musculus
16
10/01/2018
-
ENA
41
-
Dual IRE1 RNase functions dictate glioblastoma development
transcription profiling by array
Homo sapiens
119
09/01/2018
-
23
-
Gene expression profile of Huh7 cells upon knock-down of FOXA2 or FOXA2-DS-S
transcription profiling by array
Homo sapiens
9
09/01/2018
265
-
Transduced cord blood CD34+ cells with empty vector, AML1-ETO and ETV6-RUNX1
transcription profiling by array
Homo sapiens
30
07/01/2018
-
58
-
Stromal myofibroblasts drive tumorigenesis in Peutz-Jeghers Syndrome polyposis models
RNA-seq of coding RNA
Mus musculus
15
05/01/2018
ENA
77
-
Transcription profiling by array of human macrophages treated with miR-182 and infected with Francisella tularensis
transcription profiling by array
Homo sapiens
12
05/01/2018
-
56
-
miRNA profiling of human umbilical cord derived mesenchymal stem cells in the process of smooth muscle cell differentiation
microRNA profiling by array
Homo sapiens
9
04/01/2018
-
-
-
RNAseq analysis of Xcc strain B100 in minimum media
RNA-seq of coding RNA
Xanthomonas campestris pv. campestris
1
04/01/2018
-
ENA
56
-
RNA-seq of WTAP knockdown human pluripotent stem cells during the exit from pluripotency induced by Activin/Nodal inhibition
RNA-seq of coding RNA
Homo sapiens
18
04/01/2018
-
ENA
52
-
Transcription profiling by array of neonatal mouse cardiomyocytes (NMC) cultured in hypoxia (3% O2) with and without a lentiviral shRNA-mediated knockdown of Sf3b1 to investigate alternative splicing
transcription profiling by array
Mus musculus
6
03/01/2018
-
43
-
Cytokine-mediated natural killer cells effects impair hematopoietic stem cell function
transcription profiling by array
Mus musculus
16
02/01/2018
-
49
-
RNA-seq analysis of grxs17 seedlings
RNA-seq of coding RNA
Arabidopsis thaliana
3
02/01/2018
-
ENA
46
-
Pdx1 occupancy during mouse and human development
ChIP-seq
Mus musculus
3
02/01/2018
ENA
52
-
RNA-seq of human U2OS cells depleted of NUAK1 by shRNA compared to control
RNA-seq of coding RNA
Homo sapiens
6
01/01/2018
-
ENA
67
-
Transcription profiling by array of adult mouse lung exposed to room air (control) or 100% oxygen between postnatal days 0 to 4
transcription profiling by array
Mus musculus
6
01/01/2018
-
46
-
Detecting Early Signs of Heat and Drought Stress in Phoenix dactylifera (Date Palm)
RNA-seq of coding RNA
Phoenix dactylifera
32
01/01/2018
-
ENA
55
-
Microarray experiment to characterise the signalling pathways downstream SUCNR1 activation in murine Neural Stem Cells (NSCs)
transcription profiling by array
Mus musculus
12
01/01/2018
-
48
-
Microarray experiment of murine macrophages co-cultured with neural stem cells in the presences of LPS
transcription profiling by array
Mus musculus
16
01/01/2018
-
47
-
Characterization of the transcriptional response to hypoxia in MDA-MB-231-shCAIX, MCF7-shCAIX and the respective control cells grown as multicellular spheroids under hypoxic or normoxic conditions
transcription profiling by array
Homo sapiens
16
01/01/2018
-
74
-
RNA-seq analysis of normoxic and hypoxic tumor-associated macrophages from wild type or REDD1 knockout mice
RNA-seq of coding RNA
Mus musculus
16
01/01/2018
-
ENA
57
-
RIP-chip by array of intestinal tumours from Elavl1 overexpressing and wild-type mice in a mouse model of colitis associated cancer
RIP-chip by array
Mus musculus
6
01/01/2018
-
38
-
Transcription profiling by array of intestinal tumours from Elavl1 overexpressing and wild-type mice in a mouse model of colitis associated cancer
transcription profiling by array
Mus musculus
6
01/01/2018
-
32
-
Translation profiling by array of mouse epithelial cell lines (CMT93) in which HuR is overexpressed or knocked down
translation profiling
Mus musculus
6
01/01/2018
-
27
-
Gene expression profiling of 621-101 cells with rapamycin treatment and Rheb downregulation
transcription profiling by array
Homo sapiens
12
01/01/2018
-
56
-
Genome-scale transcriptomic study into the role of AbsA2 in regulating antibiotic biosynthesis in Streptomyces coelicolor
transcription profiling by array
Streptomyces coelicolor A3(2)
12
01/01/2018
33
-
Genome-scale ChIP-on-chip study into the role of AbsA2 in regulating antibiotic biosynthesis in Streptomyces coelicolor
ChIP-chip by array
Streptomyces coelicolor A3(2)
12
01/01/2018
26
-
Transcriptome responses in the abscission, distal and proximal regions of the flower pedicel during shedding of flower in Euphorbia pulcherrima
RNA-seq of coding RNA
Euphorbia pulcherrima
36
31/12/2017
-
ENA
46
-
RNA-IP of TAP-tagged 4EIP in Trypanosoma brucei
RNA-seq of coding RNA
Trypanosoma brucei
4
31/12/2017
-
ENA
36
-
Control human blood RNA
RNA-seq of coding RNA
Homo sapiens
3
31/12/2017
-
ENA
37
-
Deconvolution ChIP-seq profiling of UTF and RPA194 in K562 cells to identify analogous enhancer structures on mouse and human ribosomal RNA genes
ChIP-seq
Homo sapiens
4
31/12/2017
-
ENA
40
-
Transcription profiling by array of Arabidopsis thaliana columbia and DEWAX2 overexpression plants line stems
transcription profiling by array
Arabidopsis thaliana
6
31/12/2017
-
24
-
Trigeminal Ganglion Transcriptome Analysis in Rat Models of Medication Overuse Headache Reveals Coherent and Widespread Induction of Pronociceptive Gene Expression Patterns
transcription profiling by array
Rattus norvegicus
2
31/12/2017
-
26
-
Differential expression analysis of human small RNAs in young normal, old normal (protected)) and old osteoarthritis (unprotected ) knee cartilage
microRNA profiling by array
Homo sapiens
29
31/12/2017
-
31
-
Differential expression analysis of small RNAs in young normal and old osteoarthritis cartilage
microRNA profiling by array
Homo sapiens
12
31/12/2017
-
26
-
RNA-seq of hippocampal samples from IL-18KO/APP/PS1 , WT, IL-18KO, and APP/PS1 mice
RNA-seq of coding RNA
Mus musculus domesticus
16
31/12/2017
-
ENA
25
-
Molecular response of Atinian elm during vessel invasion by vascular pathogen Ophiostoma novo-ulmi
transcription profiling by array
Ulmus minor
15
31/12/2017
-
22
-
Simple sequence repeat identification for RSS1 gene in multiple varieties of Oryza sativa
DNA-seq
Oryza sativa, Oryza sativa Indica Group, Oryza sativa Japonica Group
6
31/12/2017
-
ENA
25
-
Simple sequence repeat identification for RBOHB gene in multiple varieties of Oryza sativa
DNA-seq
Oryza sativa, Oryza sativa Indica Group, Oryza sativa Japonica Group
6
31/12/2017
-
ENA
23
-
Gene expression profiling of acute myeloid leukemia samples from Polish adult AML-M1 and M2 patients
transcription profiling by array
Homo sapiens
118
31/12/2017
-
34
-
Transcription profiling of HL-60 acute myeloid leukemia cells treated with Daunorubicin (DNR), Cytarabin (Ara-C), or NADPH oxidase inhibitor VAS2870
transcription profiling by array
Homo sapiens
12
31/12/2017
27
-
Microarray analysis of Du145, PC3 and LNCaP human prostate cancer cell lines
transcription profiling by tiling array
Homo sapiens
36
31/12/2017
-
42
-
RNA-Seq analysis in bovine muscle
RNA-seq of coding RNA
Bos taurus
8
31/12/2017
-
ENA
32
-
RNAseq of coding RNA in the liver, spleen, kidney, abdominal muscle and gonadal adipose tissue of knock out mice and wild type controls
RNA-seq of coding RNA
Mus musculus
94
31/12/2017
-
ENA
30
-
Next Generation Sequencing Analysis of Wild Type and VAChTNkx2.1-Cre-flox/flox Hippocampal Transcriptomes
RNA-seq of coding RNA
Mus musculus
7
31/12/2017
ENA
25
-
Defining the genomic occupancy of the general regulatory factor Abf1 in budding yeast
ChIP-chip by array
Saccharomyces cerevisiae
3
31/12/2017
-
21
-
Wilms tumour arises from a precursor cell capable of generating the entire kidney
transcription profiling by array
Homo sapiens
32
31/12/2017
-
26
-
Transcription of Alkylsuccinate Synthase Genes in Desulfatibacillum alkenivorans AK-01
transcription profiling by array
Desulfatibacillum alkenivorans
12
31/12/2017
16
-
The genome-scale DNA-binding of FadR transcription factor in Sulfolobus acidocaldarius
ChIP-seq
Sulfolobus acidocaldarius DSM 639
6
30/12/2017
-
ENA
23
-
Rat infection with Trypanosoma rhodesiense clinical isolates
RNA-seq of coding RNA
Rattus norvegicus
10
30/12/2017
-
ENA
22
-
Transcription profiling of endometrial cancer comparing aggressive primary tumors and metastases
transcription profiling by array
Homo sapiens
111
30/12/2017
77
-
Transcription profiling by array of a pancreatic cancer cell line treated with 8 different statins compared with untreated or vehicle treated controls
transcription profiling by array
Homo sapiens
53
30/12/2017
30
-
Molecular and cellular dynamics in the skin, the lymph nodes and the blood of the immune response to intradermal injection of Modified Vaccinia Ankara vaccine
transcription profiling by array
Macaca fascicularis
21
29/12/2017
-
30
-
RNA seq of different species of Salsoleae with different photosynthetic types
RNA-seq of coding RNA
Hammada scoparia, Salsola divaricata, Salsola oppositifolia, Salsola webbii
24
29/12/2017
-
ENA
25
-
Effect of silencing DLC1 (Deleted in Liver Cancer 1) in Human Umbilical Vein Endothelial Cells (HUVEC)
transcription profiling by array
Homo sapiens
11
28/12/2017
-
57
-
Activin/Nodal-dependent N6-methyladenosine (m6A) deposition in human pluripotent stem cells
RIP-seq, methylation profiling by high throughput sequencing
Homo sapiens
12
26/12/2017
-
ENA
56
-
Analysis of Cas9/sgRNA mutagenic activity at a variety of loci in zebrafish (Run6)
DNA-seq
Danio rerio
17
25/12/2017
ENA
46
-
Identification of drought responsive genes at reproductive stage in upland rice variety Nagina22 through comparative microarray analysis
transcription profiling by array
Oryza sativa Indica Group
6
25/12/2017
-
37
-
North American Beaver (Castor canadensis) RNAseq 16 pooled tissue samples
RNA-seq of coding RNA
Castor canadensis
1
24/12/2017
-
ENA
37
-
Transcription profiling of Arabidopsis srk2abgh mutant plants under a dehydration stress condition
transcription profiling by array
Arabidopsis thaliana
4
24/12/2017
-
33
-
Transcriptional profiling using microarrays to elucidate the effects of partial whiB1 gene deletion in Mycobacterium tuberculosis H37Rv
transcription profiling by array
Mycobacterium tuberculosis
8
22/12/2017
-
35
-
Giant marker chromosomes in cancer
genotyping by array
Homo sapiens
4
22/12/2017
-
35
-
ACE-Scan of the natural add riboswitch aptamer on 10^10 Gen1 DNA microarrays with varying buffer temperatures and Mg2+ cation concentrations
comparative genomic hybridization by array
synthetic construct
24
20/12/2017
-
5
-
ACE-Scan of the thrombin DNA aptamer on 10^10 Gen1 DNA microarrays with sodium and potassium buffers in two colors
comparative genomic hybridization by array
synthetic construct
12
20/12/2017
-
2
-
ACE-Scan of the cocaine DNA aptamer on 10^12 Gen1 DNA microarray
comparative genomic hybridization by array
synthetic construct
6
20/12/2017
-
2
-
ACE-Scan of the ATP RNA aptamer on 10^12 Gen1 DNA microarray
comparative genomic hybridization by array
synthetic construct
1
20/12/2017
-
2
-
ACE-Scan of the ATP DNA aptamer on various density Gen2 DNA microarrays
comparative genomic hybridization by array
synthetic construct
6
20/12/2017
-
3
-
ACE-Scan of the ATP DNA aptamer on 10^12 density Gen1 DNA microarray
comparative genomic hybridization by array
synthetic construct
6
20/12/2017
-
3
-
Bulk RNA-seq validation experiment comparing blood from healthy donors and two groups of metastatic melanoma patients: responders and non-responders to anti-PD-1 immunotherapy
RNA-seq of coding RNA
Homo sapiens
12
20/12/2017
-
ENA
177
-
Genome wide analysis of STAT3-mediated transcription and binding sites in mouse female germ stem cell (ChIP-seq)
ChIP-seq
Mus musculus
2
20/12/2017
-
ENA
43
-
Genome wide analysis of STAT3-mediated transcription and binding sites in mouse female germ stem cell (RNA-seq)
RNA-seq of coding RNA
Mus musculus
4
20/12/2017
-
ENA
56
-
Transcription profiling by array to investigate doxorubicin-induced toxicity in human cardiomyocytes derived from embryonic stem cell line SA121
transcription profiling by array
Homo sapiens
51
19/12/2017
-
65
-
Transcription profiling by array of decidual CD8+ CCR7-CD45RA- Effector-Memory T cells
transcription profiling by array
Homo sapiens
16
19/12/2017
-
63
-
Methylation profiling identifies two subclasses of squamous cell carcinoma related to distinct cell types of origin
methylation profiling by array
Homo sapiens
92
19/12/2017
-
54
-
Transcriptome analysis of PE-degrading Pseudomonas aeruginosa
RNA-seq of coding RNA
Pseudomonas aeruginosa
4
19/12/2017
-
ENA
53
-
Control libraries for Arabidopsis thaliana Col-0 flower buds
DNA-seq
Arabidopsis thaliana
6
18/12/2017
-
ENA
62
-
The global effect of hypochlorite stress on the changes in the transcriptome in Staphylococcus aureus USA300
RNA-seq of coding RNA
Staphylococcus aureus subsp. aureus USA300
6
18/12/2017
-
ENA
51
-
Microarray analysis of human A549 lung cancer cells treated with brefeldin A, golgicide A, monensin or vehicle control for 8 h or 20 h
transcription profiling by array
Homo sapiens
30
18/12/2017
-
78
-
Transcription profiling of mature and developing leaves of 8 species of the genus Flaveria (F.pringlei, F.robusta, F.floridana, F.ramosissima, F.brownii, F.palmeri, F.bidentis and F.trinervia)
transcription profiling by array
Flaveria bidentis, Flaveria brownii, Flaveria floridana, Flaveria palmeri, Flaveria pringlei, Flaveria ramosissima, Flaveria robusta, Flaveria trinervia
16
18/12/2017
-
31
-
Transcription profiling by array of Ebf2-expressing bone marrow mesenchymal cells from Ebf2-GFP heterozgous and Ebf2-GFP homozygous mice
transcription profiling by array
Mus musculus
12
17/12/2017
-
43
-
RNA-Seq data: RNA-IP (TAP-ZC3H30 pull down followed by RNA-Seq) and total transcriptomics (Effect of ZC3H30 gene deletion) in procyclic form of T. brucei
RNA-seq of coding RNA
Trypanosoma brucei
12
16/12/2017
-
ENA
39
-
RNAi of XAC1 (Tb927.7.2780) in Trypanosoma brucei bloodstream forms
RNAi profiling by high throughput sequencing
Trypanosoma brucei
4
16/12/2017
-
ENA
44
-
Transcriptomic-wide shifts in diurnal gene expression from the disruption of light-dark cycle in a model cnidarian
transcription profiling by array
Nematostella vectensis
12
16/12/2017
34
-
Analysis of Cas9/sgRNA mutagenic activity at a variety of loci in zebrafish (Run 10)
RNA-seq of coding RNA
Danio rerio
11
15/12/2017
ENA
7
-
Analysis of Cas9/sgRNA mutagenic activity at a variety of loci in zebrafish (Run 9)
RNA-seq of coding RNA
Danio rerio
16
15/12/2017
ENA
8
-
Analysis of Cas9/sgRNA mutagenic activity at a variety of loci in zebrafish (Run 8)
RNA-seq of coding RNA
Danio rerio
10
15/12/2017
ENA
7
-
Analysis of Cas9/sgRNA mutagenic activity at a variety of loci in zebrafish (Run 7)
DNA-seq
Danio rerio
16
15/12/2017
ENA
8
-
RNA-seq of human myoblasts isolated from Duchenne muscular dystrophy (DMD) and histologically normal muscle biopsies with or without overexpression of he Polycomb group geneBMI1
RNA-seq of coding RNA
Homo sapiens
96
15/12/2017
ENA
55
-
Transcriptional profiling of activated CD4+ memory T cells exposed to anti-TNF and recombinant human TNF-alpha in vitro
RNA-seq of coding RNA
Homo sapiens
8
15/12/2017
ENA
69
-
Methylation profiling by array of 79 glioblastoma (GBM) patients in a validation cohort to demonstrate the performance and the robustness of an identified six-CpGs biomarker for GBM management
methylation profiling by array
Homo sapiens
79
15/12/2017
82
-
Proteomic profiling of human monocytes stimulated in vitro with Neisseria meningitidis and IL-10
proteomic profiling by array
Homo sapiens
96
15/12/2017
-
28
-
Analysis of binding of the transcriptional factor Nrf1 in mouse embryonic stem cells
ChIP-seq
Mus musculus
3
15/12/2017
-
ENA
30
-
ATAC-seq time-course of human and mouse T helper type 2 cells
ATAC-seq
Homo sapiens, Mus musculus
120
14/12/2017
-
ENA
35
-
RNA-seq of mouse pancreatic pericytes from wild-type and Tcf7l2-mutated mice
RNA-seq of coding RNA
Mus musculus
9
14/12/2017
-
ENA
125
-
Gene expression changes induced by MV130 (Bactek®) in human monocytes-derived dendritic cells
transcription profiling by array
Homo sapiens
8
14/12/2017
26
-
Oryza sativa ssp. indica Illumina lwhole-genome bisulfite sequencing used for coverage comparison next to the method plant-RRBS
Bisulfite-seq
Oryza sativa Indica Group
4
14/12/2017
-
ENA
18
-
Oryza sativa ssp. indica Illumina libraries of the method plant-RRBS used for methylome profiling
Bisulfite-seq
Oryza sativa Indica Group
20
14/12/2017
-
ENA
33
-
Natural variation of gibberellin responses in Arabidopsis thaliana
RNA-seq of coding RNA
Arabidopsis thaliana
45
14/12/2017
ENA
19
-
Expression analysis of Arabidopsis seedlings 3h and 2h after transfer to sucrose
RNA-seq of coding RNA
Arabidopsis thaliana
12
14/12/2017
ENA
18
-
RNA-Seq analysis of human osteoarthritic intact cartilage following total knee replacement
RNA-seq of coding RNA
Homo sapiens
75
13/12/2017
-
ENA
66
-
Global analysis of miRNA expression profile during Mycobacterium tuberculosis infection of human primary dendritic cells
microRNA profiling by array
Homo sapiens
20
12/12/2017
97
-
Methylation array profiling of 24 Pancreatic Ductal Adenocarcinoma samples
methylation profiling by array
Homo sapiens
24
12/12/2017
-
47
-
SNP array profiling of 24 Pancreatic Ductal Adenocarcinoma samples
genotyping by array
Homo sapiens
24
12/12/2017
-
31
-
RNA sequencing of pancreatic adenocarcinoma (PDAC) xenograft samples
RNA-seq of coding RNA
Homo sapiens
30
12/12/2017
-
ENA
62
-
miRNA profiling by high-throughput sequencing of pancreatic adenocarcinoma (PDAC) xenografts
microRNA profiling by high throughput sequencing
Homo sapiens
29
12/12/2017
-
ENA
43
-
Methylation profiling by array of pancreatic adenocarcinoma (PDAC) xenografts
methylation profiling by array
Homo sapiens
30
12/12/2017
-
29
-
SNP profiling of pancreatic adenocarcinoma (PDAC) xenografts
genotyping by array
Homo sapiens
30
12/12/2017
-
131
-
Small non-coding RNAs as biomarkers of musculoskeletal ageing and osteoarthritis
RNA-seq of non coding RNA
Mus musculus
41
12/12/2017
-
ENA
38
-
CCR8 expression defines tissue-resident memory T cells in human skin
RNA-seq of coding RNA
Homo sapiens
32
11/12/2017
-
ENA
16
-
Comparison of gene expression in adult and larvae Drosophila melanogaster strains modified with tTAV-based positive feedback loop
transcription profiling by array
Drosophila melanogaster
60
11/12/2017
-
9
-
RNA-seq of Spinocerebellar Ataxia Type2 (SCA2) transgenic mouse lines and age-matched wild-type
RNA-seq of coding RNA
Mus musculus
64
09/12/2017
-
ENA
3
-
Testis transcriptome alterations in zebrafish (Danio rerio) with reduced fertility due to developmental exposure to 17α-ethinylestradiol
RNA-seq of coding RNA
Danio rerio
12
09/12/2017
ENA
65
-
Expression Profiling by array of Long Noncoding RNAs in Peripheral Blood Mononuclear Cells from Multiple Sclerosis Patients
transcription profiling by array
Homo sapiens
11
08/12/2017
-
54
-
The Ink4a/Arf locus operates as a regulator of the circadian clock modulating RAS activity
transcription profiling by array
Mus musculus
8
08/12/2017
-
38
-
Transcription profiling array of human glioblastoma cell line U87MG comparing control cells (U87RNAi) with U87shLAPTM5 knockdown cells
transcription profiling by array
Homo sapiens
6
07/12/2017
-
28
-
RNA-IP of TAP-tagged ZC3H32 in bloodstream-form Trypanosoma brucei
RNA-seq of coding RNA
Trypanosoma brucei
6
07/12/2017
-
ENA
43
-
Transcription profiling by array of dermal and epidermal cells isolated from scar tissues of patients with keloid disease
transcription profiling by array
Homo sapiens
40
07/12/2017
57
-
ChIP-seq analysis of mouse T helper type 2 cells stimulated with CD3/28 and IL-4
ChIP-seq
Mus musculus
14
06/12/2017
-
ENA
54
-
Role of CCR2+ myeloid cells in pancreatic beta cell growth and regeneration
transcription profiling by array
Mus musculus
6
06/12/2017
61
-
Elucidation of the mechanism behind the potentiating activity of baicalin against Burkholderia cepacia complex biofilms
RNA-seq of coding RNA
Burkholderia cenocepacia
12
04/12/2017
-
ENA
86
-
Basal mRNA expression levels of single-cell derived FaDu clones with cisplatin-sensitive / resistant phenotype
transcription profiling by array
Homo sapiens
8
04/12/2017
-
56
-
Genomic profiling of the FaDu cell line and derived subclones using amplicon-based targeted sequencing
genotyping by high throughput sequencing
Homo sapiens
6
04/12/2017
-
ENA
51
-
RNA-seq to investigate miRNA expression in blood of East Sicilian sufferers of Klinefelter’s syndrome compared to healthy control donors
RNA-seq of non coding RNA
Homo sapiens
20
02/12/2017
-
ENA
108
-
Transcription profiling by array of wheat after inoculation with Puccinia triticina, Puccinia hordei or mock-inoculation to identify candidate genes for nonhost resistance against rust disease
transcription profiling by array
Triticum aestivum
36
02/12/2017
-
82
-
Transcription profiling by array of barley after inoculation with Puccinia hordei, Puccinia triticina or mock-inoculation to identify candidate genes for nonhost resistance against rust disease
transcription profiling by array
Hordeum vulgare
36
02/12/2017
-
53
-
Transcription profiling by array of wheat after inoculation with an adapted and a non-adapted Magnaporthe isolate or mock-inoculation to identify candidate genes for nonhost resistance against blast disease
transcription profiling by array
Triticum aestivum
36
02/12/2017
-
63
-
Transcription profiling by array of barley after inoculation with an adapted and a non-adapted Magnaporthe isolate or mock-inoculation to identify candidate genes for nonhost resistance against blast disease
transcription profiling by array
Hordeum vulgare
36
02/12/2017
-
51
-
Time-series RNA-seq experiment performed on nine melanoma cell lines treated with BRAF inhibitor vemurafenib
RNA-seq of coding RNA
Homo sapiens
33
02/12/2017
-
ENA
93
-
Transcription profiling by microarray of mouse B16F10 cells transduced with cDNAs encoding eGFP control, p19Arf, murine interferon-beta (IF-B) or the combination of p19Arf plus IF-B to study the modulated genes
transcription profiling by array
Mus musculus
12
02/12/2017
-
72
-
Whole transcriptomic analysis of mouse ATDC5 chondrocyte precursor cells under 25 MPa hydrostatic pressure for 0, 1 , 4 or 24h
transcription profiling by array
Mus musculus
8
02/12/2017
56
-
Using mitoribosomal profiling to investigate human mitochondrial translation
RNA-seq of coding RNA
Homo sapiens
5
01/12/2017
-
ENA
69
-
RNAseq of mouse presomitic mesoderm segments along the anteroposterior embryo axis
RNA-seq of coding RNA
Mus musculus
31
01/12/2017
ENA
43
-
Single-cell RNAseq of whole B6 mouse E8.25 embryos
RNA-seq of coding RNA from single cells
Mus musculus
456
01/12/2017
-
117
-
Whole genome transcriptional analysis of Alzheimer's disease patients compared with age-matched non-demented controls
transcription profiling by array
Homo sapiens
35
01/12/2017
144
-
Transcription profiling by array of effect of Copanlisib in Relapsed or Refractory Indolent Lymphoma patients
transcription profiling by array
Homo sapiens
78
01/12/2017
65
-
RNA-seq in a patient with idiopathic X-linked intellectual disability compared to healthy controls with normal mir222 expression
RNA-seq of coding RNA
Homo sapiens
4
01/12/2017
-
ENA
49
-
SNP arrays to confirm X-linkage in a family with idiopathic intellectual disability
genotyping by array
Homo sapiens
16
01/12/2017
-
33
-
ChIP-seq of Mediator subunits in Mediator mutants and wild type yeast
ChIP-seq
Saccharomyces cerevisiae
13
01/12/2017
-
ENA
55
-
Single-cell RNAseq of whole mouse E8.25 embryos
RNA-seq of coding RNA from single cells
Mus musculus
6
01/12/2017
-
106
-
Molecular subtyping of breast cancer by transcription profiling
transcription profiling by array
Homo sapiens
522
01/12/2017
-
154
-
ChIP-seq of the multiple antibiotic resistance repressor (MarR) protein of Enterotoxigenic Escherichia coli strain H10407
ChIP-seq
Escherichia coli
4
01/12/2017
-
ENA
36
-
Microarray analyses of microRNA expressions in comparison with immortal healthy mammary epithelial cells, breast cancer cells, and long-term-cultured breast cancer stem cells
microRNA profiling by array
Homo sapiens
10
01/12/2017
51
-
Transcription profiling of small heterodimer partner deficiency (SHP) knockout mice heart
transcription profiling by array
Mus musculus
12
01/12/2017
-
21
-
IMPC (international mouse phenotyping consortium) high throughput RNA seq of 1143 samples from 106 IMPC knockout lines
RNA-seq of coding RNA
Mus musculus
1143
01/12/2017
-
ENA
49
-
RNA-Seq of wild type yeast and several knockout strains in different chemically defined media
RNA-seq of coding RNA
Saccharomyces cerevisiae
23
01/12/2017
-
ENA
35
-
Opbp ChIP-seq in Drosophila melanogaster embryos
RNA-seq of coding RNA
Drosophila melanogaster
3
01/12/2017
-
ENA
15
-
WG-DASL expression profiling of formalin-fixed paraffin embedded primary breast tumours and matched lymph node metastases across four clinically relevant metastatic groups
transcription profiling by array
Homo sapiens
694
01/12/2017
42
-
Identifying crossover locations in Arabidopsis thaliana recq4a recq4b and HEI10 recq4a recq4b Col x Ler F2 populations using genotyping by sequencing
genotyping by high throughput sequencing
Arabidopsis thaliana
384
30/11/2017
-
ENA
29
-
Transcription profiling of bovine mammary epithelial cells stimulated with Mycoplasma bovis against untreated controls
transcription profiling by array
Bos taurus
6
30/11/2017
23
-
Defining the molecular properties of the repairing epithelium during DSS induced colitis
transcription profiling by array
Mus musculus
6
30/11/2017
-
28
-
Defining the effect of extracellular matrix on cellular identity in mouse intestinal epithelial cells
transcription profiling by array
Mus musculus
6
30/11/2017
-
34
-
Expression analysis of foetal and adult intestinal epithelial cells cultured in vitro
transcription profiling by array
Mus musculus
6
30/11/2017
-
24
-
RNA-seq of fetal urinary bladder and lung tissue
RNA-seq of coding RNA
Homo sapiens
8
30/11/2017
-
, ENA
33
-
Differentiation of the human gonad: temporal expression of key genes in fetal ovary and testis
transcription profiling by array
Homo sapiens
46
29/11/2017
-
69
-
Carboxypeptidase E transmits its anti-migratory function in glioma cells via transcriptional regulation of cell architecture and motility regulating factors
transcription profiling by array
Homo sapiens
6
29/11/2017
-
49
-
Carboxypeptidase E transmits its anti-migratory function in glioma cells via transcriptional regulation of cell architecture and motility regulating factors
transcription profiling by array
Homo sapiens
6
29/11/2017
-
34
-
RNA-Seq of Drosophlia adult mid-gut with the induction of RNAi against the largest subunit of RNA polymerase III
RNA-seq of coding RNA
Drosophila melanogaster
6
29/11/2017
-
ENA
81
-
The expression profiles of 30 transcription factors in 17 inducible gain-of-function lines after activation of overexpression, including 5 time points
transcription profiling by array
Arabidopsis thaliana
380
28/11/2017
37
-
The expression profiles of 31 transcription factors in wild-type Col-0 plants upon mild osmotic stress, including 10 time points and different leaf tissues
transcription profiling by array
Arabidopsis thaliana
96
28/11/2017
47
-
Microarrays of mouse embryonic limb skeletal muscle at days E14.5 and E18.5 lacking the RYR1 or Cav1.1 Ca2+ channels
transcription profiling by array
Mus musculus
36
24/11/2017
-
100
-
RNA-seq of epiblast from mouse embryos at E4.5, E4.75 and E5.0
RNA-seq of coding RNA
Mus musculus
12
24/11/2017
ENA
129
-
Wild-type Lister 427 Bloodstream-form polysome profiles with ZC3H32 knock-down
RNA-seq of coding RNA
Trypanosoma brucei
18
24/11/2017
-
ENA
41
-
Identification of heterogeneous senescence-associated transcriptional programs
RNA-seq of coding RNA
Homo sapiens
78
22/11/2017
-
ENA
156
-
Microarray analysis of resting Nkrp1g+ NK cells versus resting Nkrp1g- NK cells from spleens of female BALB/c mice
transcription profiling by array
Mus musculus
6
21/11/2017
96
-
ChIPseq of Myocyte Enhancer Factor 2 in neonatal rat cardiomyocytes to distinguish MEF2 binding sites
ChIP-seq
Rattus norvegicus
4
21/11/2017
ENA
78
-
Comparison of the metabolic response to over-production of p-coumaric acid in two yeast strains
RNA-seq of coding RNA
Saccharomyces cerevisiae
64
21/11/2017
ENA
75
-
Single cell RNA-Seq of the murine non-myocyte cardiac cellulome
RNA-seq of coding RNA from single cells
Mus musculus
2
21/11/2017
-
92
-
RNA-seq of hypoxic and normoxic soybean roots (cultivars: Embrapa 45 and BR 4)
RNA-seq of coding RNA
Glycine max
12
21/11/2017
ENA
81
-
Diurnal gills transcriptome of the oyster Crassostrea gigas fed with non-harmful and harmful algae
RNA-seq of coding RNA
Crassostrea gigas
52
20/11/2017
-
ENA
85
-
Transcription profiling of primary monocytes in human donors suffering from rheumatoid arthritis compared to healthy controls
transcription profiling by array
Homo sapiens
5
19/11/2017
-
83
-
Hypoxia and Intrinsic Transcriptomic Subtyping of Soft Tissue Sarcoma
RNA-seq of coding RNA
Homo sapiens
40
17/11/2017
-
ENA
115
-
Single-cell RNA-Seq data of zebrafish blood cells
RNA-seq of coding RNA from single cells
Danio rerio
2015
17/11/2017
-
ENA
150
-
RNAseq analysis of microaerobic and aerobic cultures of Pseudomonas extremaustrali
RNA-seq of coding RNA
Pseudomonas extremaustralis
4
17/11/2017
-
ENA
88
-
Mating system manipulation and the evolution of sex-biased gene expression in Drosophila
RNA-seq of coding RNA
Drosophila pseudoobscura bogotana
96
17/11/2017
-
ENA
68
-
Transcription profiling by array of genetically engineered murine hepatoma Hepa8F5 cells with eight doxycylcline-inducible liver-enriched transcription factors to study transcription response under induced high liver function
transcription profiling by array
Mus musculus
5
15/11/2017
-
89
-
RNA-Seq analysis of Arabidopsis heterozygous mutant of gene (AT1G31870), which encodes a pre-mRNA-splicing factor of RES complex protein against the wild type (Col)
RNA-seq of coding RNA
Arabidopsis thaliana
4
11/11/2017
-
ENA
100
-
Transcriptome analysis of myeloid cells (neutrophils, macrophages and dendritic cells) isolated from the spinal cord of mice with experimental autoimmune encephalomyelitis (EAE)
transcription profiling by array
Mus musculus
8
10/11/2017
109
-
Terminus DNA loss in the Escherichia coli
DNA-seq
Escherichia coli str. K-12 substr. MG1655
15
10/11/2017
ENA
103
-
Transcriptional profiling of Th1, Th2, Th9, and Th17 T cell clones
RNA-seq of coding RNA
Homo sapiens
67
10/11/2017
-
ENA
176
-
Transcriptomic characterization of the human cell cycle in individual unsynchronized cells
RNA-seq of coding RNA from single cells
Homo sapiens
96
09/11/2017
ENA
218
-
Population transcriptomics in Daphnia galeata
RNA-seq of coding RNA
Daphnia galeata galeata
72
08/11/2017
-
ENA
102
-
RNA-seq of mouse alveolar macrophages sorted from CD11cCre/+ Tgfbr2fl/fl and control Tgfbr2fl/fl neonatal mice
RNA-seq of coding RNA
Mus musculus
8
08/11/2017
ENA
146
-
Transcription profiling by RNA-seq of murine hearts at different developmental stages and adult mice with ischemia/reperfusion injury
RNA-seq of coding RNA
Mus musculus
18
08/11/2017
-
ENA
111
-
DNA-seq of ELMSeq reporter cassette
DNA-seq
Mycoplasma pneumoniae
18
08/11/2017
-
ENA
79
-
Transcription profiling by high throughput sequencing of mouse embryonic stem cells following Trim24 and/or p53 knockdown
RNA-seq of coding RNA
Mus musculus
11
08/11/2017
-
ENA
435
-
Transcriptome regulating differentiation from the early human embryonic distal foregut
RNA-seq of coding RNA
Homo sapiens
6
07/11/2017
-
189
-
Toxicity of the main electronic cigarette components, propylene glycol, glycerin and nicotine in Sprague Dawley rats in a 90-day OECD inhalation study complemented with molecular endpoints (RNE)
transcription profiling by array
Rattus norvegicus
48
03/11/2017
152
-
Toxicity of the main electronic cigarette components, propylene glycol, glycerin and nicotine in Sprague Dawley rats in a 90-day OECD inhalation study complemented with molecular endpoints (Lung)
transcription profiling by array
Rattus norvegicus
48
03/11/2017
109
-
Toxicity of Toxicity of the main electronic cigarette components, propylene glycol, glycerin and nicotine in Sprague Dawley rats in a 90-day OECD inhalation study complemented with molecular endpoints (Liver)
transcription profiling by array
Rattus norvegicus
32
03/11/2017
117
-
RNA-seq time course analysis of human and mouse T helper type 2 and type 0 cells
RNA-seq of coding RNA
Homo sapiens, Mus musculus
685
02/11/2017
-
ENA
14
-
RNA sequencing of T helper cell type 2 with CRISPR-mediated gene knockouts
RNA-seq of coding RNA
Mus musculus
576
02/11/2017
-
ENA
10
-
Transcription profiling by array of blood mononuclear cells of human volunteers subjected to heat stress
transcription profiling by array
Homo sapiens
45
01/11/2017
72
-
Determination by ChIP-chip of the binding sites of the developmental transcription regulator BldC in the genome of Streptomyces venezuelae ATCC 10712
ChIP-chip by array
Streptomyces venezuelae
4
01/11/2017
110
-
Microarray evaluation of in vitro cultured Sox9+ mouse lung progenitors isolated from E12.5 embryonic lung progenitors
transcription profiling by array
Mus musculus
11
01/11/2017
-
118
-
RNA-seq of in vitro cultured Sox9+ mouse lung progenitors cells from E12.5 embryos compared to freshly isolated cells and control adult lung epithelial cells
RNA-seq of coding RNA
Mus musculus
80
01/11/2017
-
ENA
153
-
Expression differences between zebrafish embryos lacking b3glct and wildtype sibs
transcription profiling by array
Danio rerio
12
01/11/2017
95
-
Transcription profiling by array of differential gene expression in chicken primary B cells infected ex vivo with attenuated and very virulent strains of infectious bursal disease virus (IBDV)
transcription profiling by array
Gallus gallus
9
01/11/2017
116
-
RNA-seq of pooled Arabidopsis thaliana inflorescences of miRNA function related HWS overexpressors, mutants and transgenic lines
RNA-seq of coding RNA
Arabidopsis thaliana
12
01/11/2017
-
ENA
122
-
RNA-seq of human colorectal cancer cell line COLO320DM treated with the secretome of irradiated or control cancer-associated fibroblasts for 6 or 48 hours
RNA-seq of coding RNA
Homo sapiens
96
01/11/2017
-
ENA
291
-
ChIP-Seq of the Streptomyces venezuelae regulator BldD and its D116A mutant
ChIP-seq
Streptomyces venezuelae
4
01/11/2017
ENA
90
-
Gene expression comparison of olfactory neurosphere-derived cells, fibroblasts and induced pluripotent stem cells derived from the same schizophrenic donors
transcription profiling by array
Homo sapiens
30
01/11/2017
-
159
-
RNASeq profiling of AZD8186-treated HCC70 xenografts
RNA-seq of coding RNA
Homo sapiens
6
01/11/2017
ENA
255
-
RNAseq of human Ewing, MSC, fibroblast cell lines - A side population of Ewing cells exhibits stem cell properties
RNA-seq of coding RNA
Homo sapiens
22
31/10/2017
ENA
197
-
DNA-seq of multiple myeloma patient with chromothripsis 18 and rapid progression into extramedullary relapse
DNA-seq
Homo sapiens
1
31/10/2017
ENA
120
-
Comparative genomic hybridization by array of multiple myeloma patient with rapid extramedullary relapse and chromothripsis 18
comparative genomic hybridization by array
Homo sapiens
1
31/10/2017
-
118
-
RNA-seq of coding RNA from human purified intestinal epithelial samples and organoids derived from paediatric gut, feotal gut and induced pluripotent stem cells
RNA-seq of coding RNA
Homo sapiens
50
31/10/2017
-
ENA
208
-
DNA methylation array of human purified intestinal epithelial samples and organoids from paediatric and foetal small and large intestine
methylation profiling by array
Homo sapiens
134
31/10/2017
-
207
-
Transcription profiling by array to investigate interferon gene expression changes in Macaca fascicularis upon infection with Simian immunodeficiency virus
transcription profiling by array
Macaca fascicularis
54
30/10/2017
-
89
-
Gene expression in cells encapsulated within different types of alginate microcapsules
transcription profiling by array
Mus musculus
7
30/10/2017
-
62
-
Microarray gene expression analysis for Escherichia coli O157:H7 (EHEC) and its luxS-deficient mutant strain in osmotic stress condition
transcription profiling by array
Escherichia coli O157:H7 str. EDL933
4
30/10/2017
-
107
-
Cortical transcriptome of female mice treated with vehicle or estrogen and subjected to hypoxia
RNA-seq of coding RNA
Mus musculus
8
30/10/2017
-
ENA
87
-
microRNA response of Galleria mellonella to Listeria monocytogenes infection: a powerful method to predict protein function in mammals exemplified by the autophagy adaptor optineurin
transcription profiling by array
Galleria mellonella, Galleria mellonella and Listeria monocytogenes
6
30/10/2017
64
-
Genome-wide identification of urinary cell-free microRNAs for non-invasive detection of bladder cancer
microRNA profiling by array
Homo sapiens
31
29/10/2017
-
211
-
RNA-sequencing of human cervical cancer HeLa cells treated with splicing inhibitors Sudemycin C1, Sudemycin K, Spliceostatin A or control DMSO
RNA-seq of coding RNA
Homo sapiens
24
29/10/2017
-
ENA
179
-
MicroRNA array profiling on human pluripotent stem cell-derived cardiomyocytes exposed to doxorubicin
microRNA profiling by array
Homo sapiens
51
28/10/2017
140
-
RNA-Sequencing of wild type and UCP1-null beige adipose tissue
RNA-seq of coding RNA
Mus musculus
12
28/10/2017
-
ENA
198
-
B1 C57BL6 wild type versus B1 IL-10 Knockout
transcription profiling by array
Mus musculus
6
28/10/2017
175
-
RNA-seq of the thermophilic biomass-degrading fungus Malbranchea cinnamomea FCH 10.5 when grown on glucose, wheat bran and beechwood xylan
RNA-seq of coding RNA
Malbranchea cinnamomea
30
27/10/2017
-
ENA
141
-
Transcription profiling by array of Streptomyces coelicolor A3(2) M145 vs a ∆sco2127 mutant in modified R5 media
transcription profiling by array
Streptomyces coelicolor A3(2)
4
27/10/2017
97
-
An application of a systems toxicology approach using a human organotypic small airway cultures for a comparative assessment between a candidate modified-risk tobacco product aerosol and cigarette smoke (mRNA data)
transcription profiling by array
Homo sapiens
214
26/10/2017
179
-
An application of a systems toxicology approach using a human organotypic small airway cultures for a comparative assessment between a candidate modified-risk tobacco product aerosol and cigarette smoke
microRNA profiling by array
Homo sapiens
215
26/10/2017
172
-
An RNASeq normal tissue atlas for mouse and rat
RNA-seq of coding RNA
Mus musculus, Rattus norvegicus
77
25/10/2017
ENA
486
-
Global gene expression analysis of OsmiRNA156 over expression switchgrass lines
transcription profiling by array
Panicum virgatum
20
25/10/2017
-
103
-
Gene expression profile of murine Bone marrow derived Dendritic cells stimulated with CD40L in absence or presence of Neural Precursor cell- conditioned medium
transcription profiling by array
Mus musculus
18
25/10/2017
94
-
A novel TetR-like transcriptional regulator is induced in acid-nitrosative stress and controls expression of an efflux pump in mycobacteria
transcription profiling by array
Mycobacterium smegmatis
8
24/10/2017
-
97
-
Transcription profiling by array of liver from diploid and triploid Atlantic salmon fed with marine or vegetable-based diet during early development
transcription profiling by array
Salmo salar
24
24/10/2017
-
154
-
High-throughput RNA sequencing of six ant transcriptomes
RNA-seq of coding RNA
Formica fusca, Lasius flavus, Lasius neglectus, Lasius niger, Myrmica scabrinodis
6
24/10/2017
-
ENA
102
-
Epigenomic changes associated with TGF-beta induced EMT in MDCK cells
ChIP-seq
Canis lupus familiaris
8
23/10/2017
ENA
113
-
RNA-seq of TGF-beta induced and histone variant H2A.Z-knocked-down canine MDCK cells in epithelial-to-mesenchymal transition (EMT)
RNA-seq of coding RNA
Canis lupus familiaris
9
23/10/2017
ENA
120
-
Transcription profiling by array of rat primary hepatic stellate cells with varying degrees of in vitro activation
transcription profiling by array
Rattus norvegicus
12
23/10/2017
-
94
-
Gene expression profiling of bronchoalveolar lavage cells during Aspergillus colonization of the lung allograft
transcription profiling by array
Homo sapiens
22
22/10/2017
195
-
Transcriptional profiling of articular cartilage in a porcine model of early post-traumatic osteoarthritis
RNA-seq of coding RNA
Sus scrofa
42
22/10/2017
-
ENA
153
-
DNA methylation profiling of intestinal epithelial cells from paediatric biopsies including Inflammatory Bowel disease and healthy controls
methylation profiling by array
Homo sapiens
215
20/10/2017
-
344
-
Gene expression response in peripheral blood cells of petroleum workers exposed to very low benzene levels
transcription profiling by array
Homo sapiens
45
19/10/2017
-
343
-
Paraneoplastic Cerebellar Degeneration (PCD) related ovarian cancer transcriptomic analysis
transcription profiling by array
Homo sapiens
12
18/10/2017
234
-
Microarray of Human astrocytes transduced with lentivirus expressing FGFR3-TACC3 treated with vehicle, FGFR3-TACC3 treated with the FGFR inhibitor PD173074 for 12h, FGFR3-TACC3-K508M treated with vehicle or empty vector treated with vehicle
transcription profiling by array
Homo sapiens
16
17/10/2017
-
239
-
Microarray transcription of murine lung and uterine group 2 innate lymphoid cells (ILC2s) cultured in vitro with or without 17beta-estradiol (estrogen, E2)
transcription profiling by array
Mus musculus
9
17/10/2017
144
-
Gene expression profiles new methotrexate resistant cell lines for the study of gestational trophoblastic neoplasia
transcription profiling by array
Homo sapiens
6
17/10/2017
138
-
P63-alpha specific ChIP-seq in E13.5/E14.5 mouse palatal shelves
ChIP-seq
Mus musculus
1
17/10/2017
ENA
111
-
Overexpression of c-Jun in mouse Schwann cells of uninjured nerves
RNA-seq of coding RNA
Mus musculus
12
16/10/2017
ENA
109
-
Gene expression after fetal intestinal obstruction on rat model
transcription profiling by array
Rattus norvegicus
20
16/10/2017
-
111
-
Extravillous trophoblast and endothelial cell crosstalk mediates leukocyte infiltration to the early remodelling decidual spiral arteriole wall
transcription profiling by array
Homo sapiens
2
16/10/2017
147
-
Resistant and susceptible chicken lines show distinctive responses to Newcastle disease virus infection in the lung transcriptome
RNA-seq of coding RNA
Gallus gallus
48
14/10/2017
-
ENA
215
-
mRNA-seq based gene expression profiling of differentiating murine brown preadipocytes (IBA)
RNA-seq of coding RNA
Mus musculus
14
14/10/2017
-
ENA
119
-
Transcriptome profiling of short-term response to chilling stress in resistant and susceptible rice seedlings
RNA-seq of coding RNA
Oryza sativa Japonica Group
18
13/10/2017
-
ENA
161
-
Factor VII activating protease (FSAP) regulates the expression of inflammatory genes in vascular smooth muscle and endothelial cells
transcription profiling by array
Homo sapiens
12
13/10/2017
-
146
-
Effect of stress on the binding affinity of yeast eIF4F components to their target RNAs
RIP-seq, RNA-seq of coding RNA
Saccharomyces cerevisiae
54
11/10/2017
-
ENA
201
-
Transcription controls growth, cell kinetics and cholesterol supply to sustain ACTH responses
transcription profiling by array
Mus musculus
11
11/10/2017
145
-
RNA-Seq analysis of gene expression divergence in mammalian liver
RNA-seq of coding RNA
Balaenoptera borealis, Bos taurus, Callithrix jacchus, Canis familiaris, Cavia porcellus, Chlorocebus aethiops sabaeus, Daubentonia madagascariensis, Delphinus delphis, Felis catus, Heterocephalus glaber, Homo sapiens, Lagenorhynchus albirostris, Lemur catta, Macaca mulatta, Mesoplodon bidens, Microcebus murinus, Monodelphis domestica, Mustela putorius furo, Nycticebus coucang, Oryctolagus cuniculus, Otolemur garnettii, Rattus norvegicus, Sarcophilus harrisii, Sus scrofa, Tupaia belangeri
63
11/10/2017
ENA
289
-
Origins of MLL cancer stem cells govern leukemic self-renewal mediated by -catenin and Hoxa9
RNA-seq of coding RNA
Mus musculus
72
10/10/2017
-
ENA
278
-
Gene expression profiling of ventilation induced muscle wasting in rat diaphragm and intercostal
RNA-seq of coding RNA
Rattus norvegicus
25
08/10/2017
-
ENA
138
-
Single cell RNA sequencing of stem cell-derived retinal ganglion cells
RNA-seq of coding RNA from single cells
Homo sapiens
2
07/10/2017
-
232
-
Genome-wide analysis of long non-coding RNA expression in the mouse Pilocarpine model of temporal lobe epilepsy
transcription profiling by array
Mus musculus
8
06/10/2017
-
158
-
miRNA anlysis of extracellular vesicles (EV) secreted by embryonic stem cell-derived cardiovascular progenitor cells (hES-CPg) which recapitulate the therapeutic effects of these cells in a model of chronic heart failure (CHF)
microRNA profiling by array
Mus musculus
6
06/10/2017
-
156
-
Extracellular vesicles (EV) secreted by embryonic stem cell-derived cardiovascular progenitor cells (hES-CPg) recapitulate the therapeutic effects of these cells in a model of chronic heart failure (CHF)
transcription profiling by array
Mus musculus
38
06/10/2017
-
161
-
Oxygen-dependent changes in gene expression in Campylobacter jejuni NCTC 11168
transcription profiling by array
Campylobacter jejuni subsp. jejuni NCTC 11168
19
04/10/2017
-
174
-
RNA-Seq of human regulatory T cells and effector T cells cultured at standard 37C temperature and in mild hypothermia (33C)
RNA-seq of coding RNA
Homo sapiens
9
04/10/2017
ENA
160
-
Integrated host and viral transcriptome analysis by RNA-seq of specific pathogen-free chicken infected with Avian leukosis virus
RNA-seq of coding RNA, RNA-seq of non coding RNA
Gallus gallus
12
04/10/2017
-
ENA
166
-
Liver Transcriptome Response to Hyperthermia Stress in Three Distinct Chicken Lines
RNA-seq of coding RNA
Gallus gallus
48
04/10/2017
-
ENA
161
-
Gene expression profiles of H16N2 cells expressing EZH2 variants
RNA-seq of coding RNA
Homo sapiens
18
04/10/2017
-
ENA
121
-
microRNA array of extracellular vesicles isolated from the conditioned culture medium of HL60 cells and their chemo-resistant counterparts (HL-60/AR)
microRNA profiling by array
Homo sapiens
2
03/10/2017
215
-
Functional and transcriptional heterogeneity of human hemopoietic lympho-myeloid progenitors
RNA-seq of coding RNA
Homo sapiens
28
03/10/2017
-
ENA
264
-
DNAseq of human Ewing cell line - CADO-ES1
DNA-seq
Homo sapiens
12
02/10/2017
ENA
218
-
Transcription profiling of wild type and XY Nrg1 knock out male pooled embryonic gonads to decipher the role of this gene in sexual differentiation
RNA-seq of coding RNA
Mus musculus
8
02/10/2017
ENA
133
-
Fe ions and X-ray radiation exposure of Est2-immortalised human coronary artery endothelial cells - 1 day and 7 days post-irradiation
transcription profiling by array
Homo sapiens
24
02/10/2017
-
140
-
Transcriptome of S2 cells after depletion of the PAF1 complex component Atu/Leo1
RNA-seq of coding RNA
Drosophila melanogaster
6
02/10/2017
-
ENA
110
-
Myc binding to target sites in S2 cells (ChIPseq) in response to knockdown of Myc or the PAF1 complex component Atu/Leo1
ChIP-seq
Drosophila melanogaster
3
02/10/2017
-
ENA
112
-
Myc-dependent transcriptome of Drosophila L3 larval wing imaginal discs, and its dependency on Max and/or the PAF1 complex component Atu/Leo1
RNA-seq of coding RNA
Drosophila melanogaster
24
02/10/2017
-
ENA
107
-
RNA-seq of the zebrafish (danio rerio) brain after developmental exposure to 17-ethinylestradiol
RNA-seq of coding RNA
Danio rerio
12
02/10/2017
ENA
121
-
Salt stress in salt sensitive Oryza sativa Indica group Pokkali (salt sensitive)
RNA-seq of coding RNA
Oryza sativa Indica group
30
02/10/2017
-
ENA
123
-
Salt stress in salt sensitive Oryza sativa Indica group IR29
RNA-seq of coding RNA
Oryza sativa Indica group
30
02/10/2017
-
ENA
159
-
Tandem mass tag (TMT) quantification data from knee chondrocytes for 12 osteoarthritis patients, comparing disease tissue against control tissue in each individual
proteomic profiling by mass spectrometer
Homo sapiens
24
01/10/2017
-
140
-
Transcriptome profiling of radiation-transformed breast cells after TRPS1 siRNA knockdown
transcription profiling by array
Homo sapiens
24
01/10/2017
-
274
-
RNA-seq of the nematode Ascaridia galli exposed to flubendazole against untreated control
RNA-seq of coding RNA
Ascaridia galli
6
01/10/2017
-
ENA
132
-
RNAseq of wild-type and giantin knockout retinal pigment epithelial cell lines
RNA-seq of coding RNA
Homo sapiens
6
01/10/2017
-
ENA
138
-
Gene expression analysis of root tissue from rice grown on arsenite-spiked sediments
transcription profiling by array
Oryza sativa Indica Group
60
01/10/2017
-
164
-
Protein microarray (Protoarray, Invitrogen) screening with APECED patient, healthy relative and healthy control serum samples
proteomic profiling by array
Homo sapiens
120
01/10/2017
204
-
Global gene expression profiling of endothelial colony-forming cells from term and preterm neonates
transcription profiling by array
Homo sapiens
15
01/10/2017
123
-
Time course Chromatin Immunoprecipitation on Drosophila virilis embryos during embryogenesis
ChIP-seq
Drosophila virilis
40
01/10/2017
-
ENA
150
-
Kinome analysis of CD151 overexpressing Jurkat T cells
proteomic profiling by array
Homo sapiens
2
30/09/2017
-
149
-
Kinome analysis of human CD151+ and CD151- T cells in the absence or presence of IL-2 stimulation
proteomic profiling by array
Homo sapiens
4
30/09/2017
-
98
-
ChIP-seq of the multiple antibiotic resistance activator (MarA) protein and RNA polymerase sigma70 subunit of Enterotoxigenic Escherichia coli strain H10407
ChIP-seq
Escherichia coli
12
30/09/2017
-
ENA
103
-
Transcriptomic profiling in the animal model of multiple sclerosis
transcription profiling by array
Mus musculus
14
30/09/2017
-
122
-
Peripheral blood gene expression profiling in multiple sclerosis
transcription profiling by array
Homo sapiens
76
30/09/2017
-
304
-
Transcriptome analysis of melon-Fusarium oxysporum f. sp. melonis race 1.2 pathosystem using RNA-Sequencing
RNA-seq of coding RNA
Cucumis melo
16
30/09/2017
-
ENA
113
-
Peripheral blood gene expression profiling in multiple sclerosis
transcription profiling by array
Homo sapiens
182
30/09/2017
313
-
Transcription profiling by array of the effects of offshore saturation diving and antioxidant vitamins on human blood
transcription profiling by array
Homo sapiens
40
30/09/2017
-
173
-
Methylation profiling by array of pancreas from ductal adenocarcinoma patients and healthy controls
methylation profiling by array
Homo sapiens
24
30/09/2017
-
198
-
Transcription profiling of mice breast cancer cells with and without the introduction of PTEN pseudogene
transcription profiling by array
Mus musculus
16
30/09/2017
-
269
-
Gene expression profiles of human cancer cells UMSCC47, SCC090, and U2OS treated or not with 3 uM of 5-azacytidine for 48h
transcription profiling by array
Homo sapiens
18
29/09/2017
183
-
RNA-seq of barley lines overexpressing or silencing HvPap-1 gene
RNA-seq of coding RNA
Hordeum vulgare subsp. vulgare
9
29/09/2017
-
ENA
95
-
Global gene expression levels in wild-type (Col-0), med18 and med25 mutant lines of Arabidopsis thaliana
transcription profiling by array
Arabidopsis thaliana
9
29/09/2017
-
123
-
Illumina Infinium HumanMethylation450 BeadChip profiling of paediatric high grade gliomas and diffuse intrinsic pontine gliomas
methylation profiling by array
Homo sapiens
206
28/09/2017
-
457
-
Large-scale study of total and polysomial mRNA after DDX6 depletion in HEK293 cells
RNA-seq of coding RNA
Homo sapiens
12
28/09/2017
ENA
127
-
RNA-seq comparison of Clostridium acetobutylicum wild-type and pks mutant under batch fermentation conditions
RNA-seq of coding RNA
Clostridium acetobutylicum
6
27/09/2017
-
ENA
100
-
Microarray profiling of mESCs differentiation time course toward neuronal lineage
transcription profiling by array
Mus musculus
12
27/09/2017
-
134
-
Microarray analysis of pancreatic islets from mice treated with adenovirus containing constitutively active mutant of MEK1 against mice treated with control adenovirus containing LacZ
transcription profiling by array
Mus musculus
11
26/09/2017
115
-
ChIP-seq for Meis on mouse branchial arches at E11.5
ChIP-seq
Mus musculus
8
25/09/2017
-
ENA
133
-
ChIP-seq for Gata6 and histone H3K27Ac on mouse branchial arches at E11.5
ChIP-seq
Mus musculus
12
25/09/2017
ENA
128
-
RNA-seq analysis of branchial arches and outflow tract of the mouse embryo at E10.5 and E11.5
RNA-seq of coding RNA
Mus musculus
8
25/09/2017
-
ENA
159
-
The transcription of long non-coding RNAs is regulated by EGF in MCF10A cell line
RNA-seq of coding RNA
Homo sapiens
6
25/09/2017
-
ENA
178
-
MeDIP profiling by high-throughput sequencing of Primary Human Hepatocytes (PHH) exposed to Valproic Acid (VPA) for 5 days daily and 5 days daily exposure followed by 3 days washout
MeDIP-seq
Homo sapiens
24
25/09/2017
-
ENA
180
-
Sanger Genomics of Drug Sensitivity in Cancer Project (GDSC) RNA-seq cancer cell line gene expression data
RNA-seq of coding RNA
Homo sapiens
462
25/09/2017
-
EGA
1154
Transcription profiling of pneumonia lung tissue of H1N1 influenza infected mice
transcription profiling by array
Mus musculus
22
25/09/2017
112
-
Comparison of seven single cell Whole Genome Amplification commercial kits using targeted sequencing
genotyping by high throughput sequencing
Homo sapiens
190
24/09/2017
-
ENA
257
-
RNA-seq of Drosophila melanogaster gut to investigate the effect FKH shRNA knockdown and reduced insulin signalling activity
RNA-seq of coding RNA
Drosophila melanogaster
12
23/09/2017
-
ENA
149
-
Transcription profiling by array of peripheral blood mononuclear cells from patients suffering from Burkholderia pseudomallei induced sepsis exposed to heat inactivated B. pseudomallei or one of its antigens
transcription profiling by array
Homo sapiens
60
22/09/2017
184
-
Transcription profiling by array of four human tonsil-derived B cell populations
transcription profiling by array
Homo sapiens
8
22/09/2017
-
149
-
Barcoded mRNA-seq of murine brown preadipocytes (IBA) upon transcriptomic perturbation
RNA-seq of coding RNA
Mus musculus
23
21/09/2017
-
ENA
110
-
ChIP-seq based genome wide profiling of the histone mark H3K27ac and transcription factor Nuclear Factor 1 (NFI) in a differentiating murine brown preadipocyte cell line (IBA)
ChIP-seq
Mus musculus
14
21/09/2017
-
ENA
106
-
RNA-seq of retina from 6 pairs of litter-matched Bhlhe23-/- and wild type mice at postnatal day 7
RNA-seq of coding RNA
Mus musculus
12
20/09/2017
-
ENA
139
-
Comparison of the retinal transcriptomes of four Bhlhe23-/- mice and 4 sex and litter-matched wild type mice
transcription profiling by array
Mus musculus
8
20/09/2017
-
126
-
Microarray expression analysis of hearts of zebrafish tremblor mutants at 48 hpf compared to wild-type siblings
transcription profiling by array
Danio rerio
6
20/09/2017
95
-
RNA sequencing 10.5 dpc Rathke''s pouch with deletion of Shh
RNA-seq of coding RNA
Mus musculus
4
19/09/2017
-
ENA
130
-
A single therapeutic early-in-life antibiotic course alters host immunologic development
RNA-seq of coding RNA
Mus musculus
16
19/09/2017
-
ENA
181
-
ChIP-seq of FliA binding sites in wild-type Salmonella enterica serovar Typhimurium
ChIP-seq
Salmonella enterica subsp. enterica serovar Typhimurium
4
18/09/2017
-
ENA
113
-
RNA-seq of coding RNA wild type and fliA deletion mutant strains of Salmonella enterica serovar Typhimurium
RNA-seq of coding RNA
Salmonella enterica subsp. enterica serovar Typhimurium
4
18/09/2017
-
ENA
102
-
Marker Frequency analysis on Escherichia coli RecB mutants
DNA-seq
Escherichia coli str. K-12 substr. MG1655
38
18/09/2017
ENA
147
-
Single-cell RNA-sequencing of Platynereis dumerilii
RNA-seq of coding RNA from single cells
Platynereis dumerilii
383
18/09/2017
-
ENA
304
-
RNA-Seq of Pichia pastoris GS115 to determine the effect of inducing heterologous expression of human lysozyme (HuLy) variants
RNA-seq of coding RNA
Pichia pastoris
8
17/09/2017
ENA
148
-
Methylation profiling by array shows that mIDH-associated DNA hypermethylation in acute myeloid leukemia reflects differentiation blockage rather than inhibition of TET-mediated demethylation
methylation profiling by array
Homo sapiens
16
15/09/2017
-
232
-
RNA-seq of Gordonia rubripertincta CWB2 to uncover the styrene specific degradation pathway
RNA-seq of coding RNA
Gordonia rubripertincta
13
15/09/2017
-
ENA
147
-
CAGE transcriptomes on EBV transformed lymphoblastoid cell lines from central European individuals
RNA-seq of coding RNA
Homo sapiens
154
15/09/2017
-
ENA
262
-
Defining Immune Heterogeneity in HNSCC with RNAseq
RNA-seq of coding RNA
Homo sapiens
45
15/09/2017
-
311
-
Gene expression profile analysis of MEC cells transfected with p66Shc coding sequence (MEC-p66)
transcription profiling by array
Homo sapiens
4
14/09/2017
175
-
CD38-NAD+ Immuno-Metabolic Axis Regulates Potent Anti-Tumor T Response
transcription profiling by array
Mus musculus domesticus
9
13/09/2017
114
-
Transcription profiling by array of wild type mouse hippocampi from 186 animals of both genders and two background strains (C57Bl/6 and 129s5) between the ages of 58 to 600 days
transcription profiling by array
Mus musculus
186
13/09/2017
-
287
-
Timecourse gene expression microarray analysis of bi-allelic targeted Setdb1 mutant mouse ES cells, comparing cells with one inducible conditional (floxed) null allele and a second constitutive null allele, to control mouse ES cell lines
transcription profiling by array
Mus musculus
30
12/09/2017
-
135
-
Gene expression microarray of: 1) Cbx1 null versus revertant (single allele expression), and 2) Jarid2 null versus revertant, mutant mouse ES cells
transcription profiling by array
Mus musculus
18
12/09/2017
-
118
-
Irisin is a Pro-Myogenic Factor that Induces Skeletal Muscle Hypertrophy and Rescues Denervation-Induced Atrophy
transcription profiling by array
Mus musculus
8
11/09/2017
-
127
-
RNA-Seq of murine lung endothelial cells stimulated with IFN-gamma and dexamethasone
RNA-seq of coding RNA
Mus musculus
12
11/09/2017
ENA
151
RNAseq timecourse of rat neurons at hours (0, 2, 4, 8, 16, and 24) after treatment with BDNF, with & without ATF4 knockdown
RNA-seq of coding RNA
Rattus norvegicus
24
09/09/2017
-
ENA
132
-
Microarray gene expression analysis of T-cell prolymphocytic leukemia (T-PLL) patient samples
transcription profiling by array
Homo sapiens
12
08/09/2017
248
-
nCounter (NanoString) expression analysis of CD19+CD27-IgD- and CD19+CD27+IgD- B cells cultured with plasmacytoid dendritic cells and RNA containing immune complexes in vitro for 6 days
transcription profiling by array
Homo sapiens
20
07/09/2017
115
-
Effects of cycloheximide (CHX) on ribosome profiling experiments in Schizosaccharomyces pombe
RNA-seq of coding RNA
Schizosaccharomyces pombe
16
05/09/2017
-
ENA
154
-
Cross-reactive antibodies enhance live attenuated virus infection for increased immunogenicity
transcription profiling by array
Homo sapiens
180
05/09/2017
330
-
RNA-Seq of Brachypodium distachyon callus treated with methyl-jasmonate
RNA-seq of coding RNA
Brachypodium distachyon
32
04/09/2017
-
ENA
164
-
Expression data from tumor tissue-derived long-term-cultured breast cancer stem cells
transcription profiling by array
Homo sapiens
4
04/09/2017
-
331
-
Comparing the transcriptome profiling of ob/ob mice treated with the GLP-1 receptor agonist liraglutide, a clinically used GLP-1 receptor agonist, versus baseline controls
RNA-seq of coding RNA
Mus musculus
17
03/09/2017
-
ENA
127
-
The transcriptional regulator LysG of Mycobacterium tuberculosis activates lysE in a lysine-dependent manner
RNA-seq of coding RNA
Mycobacterium tuberculosis
7
03/09/2017
-
ENA
115
-
Acetyl-H4 chIP-seq of control, NaBu-treated, and random behavioral clusters of zebrafish 8 dpf larvae
ChIP-seq
Danio rerio
11
01/09/2017
ENA
98
-
RNA-seq of wheat leaves and roots in response to Xanthomonas translucens infection
RNA-seq of coding RNA
Triticum aestivum
12
01/09/2017
-
ENA
91
RNA-seq of human intestinal organoids colonized with E. coli and other immature intestinal tissues
RNA-seq of coding RNA
Homo sapiens
72
01/09/2017
-
ENA
217
-
Differential gene expression analysis comparing vehicle (DMSO) versus KHS101 in glioblastoma cells
transcription profiling by array
Homo sapiens
4
01/09/2017
-
174
-
Microarray of zebrafish (Danio rerio) sfpq-/-;Tg(mnx1:GFP) against sfpq+/+;Tg(mnx1:GFP) and sfpq+/-;Tg(mnx1:GFP) siblings at 24 hpf
transcription profiling by array
Danio rerio
6
01/09/2017
-
101
-
RNA-Seq of purified P-bodies from HEK293 cells
RNA-seq of coding RNA
Homo sapiens
6
01/09/2017
-
ENA
168
-
Microarray analysis of rat hippocampal microvessels at acute time points following focused ultrasound-induced increase in blood-brain barrier permeability
transcription profiling by array
Rattus norvegicus
21
01/09/2017
-
98
-
RNA-Seq analysis of mouse dopamine neurons identifies transcriptional repression of PlexinC1 by Lmx1a and Lmx1b
RNA-seq of coding RNA
Mus musculus
14
31/08/2017
-
ENA
153
Expression data of CD11b+ cells isolated from WT and C3aR knockout mice after CTX injury
RNA-seq of coding RNA
Mus musculus
4
31/08/2017
-
ENA
91
-
The role of HvCBP20 in drought response in barley
transcription profiling by array
Hordeum vulgare
18
31/08/2017
97
-
RNA-microarray analysis of PLB-985 cells cultured with or without interferon-gamma under both conditions that induce or do not induce cell differentiation
transcription profiling by array
Homo sapiens
24
31/08/2017
-
172
-
Transcriptome sequencing of the bovine parasite Trypanosoma (Megatrypanum) theileri
RNA-seq of coding RNA
Trypanosoma theileri
2
31/08/2017
-
ENA
80
-
Microarray gene expression profiling of the whole brain hemisphere in the rats with C6-glioma tumor
transcription profiling by array
Rattus norvegicus
7
31/08/2017
-
138
-
Transcription profiling of heart tissue from mice overexpressing integrin α11 or wild type controls
transcription profiling by array
Mus musculus
12
31/08/2017
-
80
-
Changes in the coding/non-coding transcriptome and DNA methylome that define the Schwann cell repair phenotype after nerve injury
RNA-seq of coding RNA
Mus musculus domesticus
27
30/08/2017
-
ENA
203
-
Different Behavioral Responses in Male and Female Mice Following a Perinatal Low Protein Diet Associates With Sex-Specific Regulation of Immediate Early Genes and Neuropeptide Y (NPY) in the Brain
transcription profiling by array
Mus musculus
24
30/08/2017
-
74
-
Transcription profiling by array of porcine peripheral blood with differing poly I:C-induced neutrophil ratio variation
transcription profiling by array
Sus scrofa
12
30/08/2017
-
80
-
Transcriptional response in acute lymphoblastic leukaemia cells to bone marrow microenvironment
transcription profiling by array
Homo sapiens
12
30/08/2017
295
-
Transcriptome analysis of Vibrio vulnificus cells that are either exposed to HT29-methotrexate intestinal epithelial cells or grown in basal medium eagle
RNA-seq of coding RNA
Vibrio vulnificus
12
29/08/2017
-
ENA
97
-
Time course RNA-seq of Mycobacterium tuberculosis exposed to nitric oxide
RNA-seq of coding RNA
Mycobacterium tuberculosis H37Rv
15
29/08/2017
-
ENA
122
-
Transcription profiling array of human glioblastoma cell line U87 comparing control cells with U87-shLIN7a knockdown cells and rescue cells which have the same Lin7a knockdown but re-express Lin7a lentivirally (U87-shLin7a+Lin7A)
transcription profiling by array
Homo sapiens
9
27/08/2017
-
202
-
Transcriptional profiling of THP1-derived human macrophages with different stimuli
transcription profiling by array
Homo sapiens
21
25/08/2017
231
-
Transcriptional profiling of primary human macrophages with different stimuli
transcription profiling by array
Homo sapiens
48
25/08/2017
290
-
Microarray analysis of bone-marrow derived macrophages (BMDMs) stimulated with two different TLR2 agonists, H. hepaticus polysaccharide or Pam3CSK4
transcription profiling by array
Mus musculus
18
25/08/2017
-
90
-
Ablation of casein kinase 1 in keratinocytes induces p53-dependent hyperpigmentation of the skin
RNA-seq of coding RNA
Mus musculus
19
25/08/2017
-
ENA
164
-
RNA-seq of C17.2 neuronal progenitor cells exposed to cerium oxide nanoparticles during cell differentiation
RNA-seq of coding RNA
Mus musculus
39
25/08/2017
ENA
145
-
Effect of Hamamelitannin, vancomycin and combination treatment of Hamamelitannin and vancomycin on gene expression in S. aureus Mu50 biofilms
RNA-seq of coding RNA
Staphylococcus aureus subsp. aureus Mu50
12
25/08/2017
-
ENA
93
-
Sequence Requirements for Cascade Function in a Type I-E CRISPR System: ChIP Library-seq
ChIP-seq
Escherichia coli str. K-12 substr. MG1655
10
24/08/2017
-
ENA
89
-
Sequence Requirements for Cascade Function in a Type I-E CRISPR System: RNA-Seq
RNA-seq of coding RNA
Escherichia coli str. K-12 substr. MG1655
4
24/08/2017
-
ENA
107
-
Sequence Requirements for Cascade Function in a Type I-E CRISPR System: ChIP-Seq
ChIP-seq
Escherichia coli str. K-12 substr. MG1655
16
24/08/2017
-
ENA
81
-
Sequence Requirements for Cascade Function in a Type I-E CRISPR System: Plasmid Loss
DNA-seq
Escherichia coli str. K-12 substr. MG1655
6
24/08/2017
-
ENA
91
-
Role of RccR in the transcriptional control of primary carbon metabolism in Pseudomonas
ChIP-seq
Pseudomonas fluorescens
8
24/08/2017
ENA
90
-
Ribosome profiling of Pseudomonas fluorescens SBW25 and its hfq deletion mutant
RNA-seq of coding RNA
Pseudomonas fluorescens
4
24/08/2017
ENA
181
-
Analysis of the Hfq regulon in Pseudomonas fluorescens SBW25
RNA-seq of coding RNA
Pseudomonas fluorescens
4
24/08/2017
ENA
316
-
Rna-seq of control and 2mM NaBu-treated zebrafish larvae (8 dpf)
RNA-seq of coding RNA
Danio rerio
6
23/08/2017
ENA
82
-
Gene expression patterns in 34 decidua samples of women in term and preterm labour
transcription profiling by array
Homo sapiens
36
23/08/2017
-
111
-
RNA-seq of starfish ( Astropecten Aranciacus ) eggs and early embyos from the Gulf of Naples, Italy, to study the molecular mechanisms of meiotic maturation and the cell cycle
RNA-seq of coding RNA
Astropecten aranciacus
13
22/08/2017
-
ENA
123
-
Genome-wide SNP signal intensity scanning to find genes differentiating cows with ovarian pathologies from healthy cows
genotyping by array
Bos taurus
12
22/08/2017
105
-
Diel changes of transcriptome in cold-treated maize
transcription profiling by array
Zea mays
56
21/08/2017
178
-
MicroRNA expression profile of non-Hodgkin B-cell lymphomas, reactive lymph nodes, pure B and T cell, lymphoblastoid cell lines and mononucleosis
microRNA profiling by array
Homo sapiens
158
20/08/2017
-
316
-
Expression profiling of Jurkat cells infected with HIV-1 and treated with digoxin or DMSO
RNA-seq of coding RNA
Homo sapiens
6
19/08/2017
-
ENA
167
Transcription profiling by microarray of 18 micro-dissected Human kidney tubule tissue samples
transcription profiling by array
Homo sapiens
18
19/08/2017
-
121
-
Gene expression in sRNA deletion mutant Burkholderia cenocepacia J2315 delta ncS35
RNA-seq of coding RNA
Burkholderia cenocepacia
18
19/08/2017
-
ENA
91
-
miRNA array of 5 plasma with recurrent stage II gastric cancer against 5 plasma non-recurrent stage III gastric cancer in humans
microRNA profiling by array
Homo sapiens
10
18/08/2017
-
178
-
Transcription profiling by array of the frontal cortices of embryonic UspX knock out mice
transcription profiling by array
Mus musculus
16
18/08/2017
83
-
Transcriptomic profiling of the brains of WNV and CHIKV infection-induced encephalitis in young mice after 2, 3 or 5 days post infection
transcription profiling by array
Mus musculus
29
17/08/2017
-
162
-
MicroRNA profiling of different TUT4 and TUT7 deficient mouse tissues/cells against controls
microRNA profiling by high throughput sequencing
Mus musculus
21
17/08/2017
-
ENA
93
-
Array profiling of different TUT4 and TUT7 deficient mouse tissues/cells against controls
transcription profiling by array
Mus musculus
32
17/08/2017
-
155
-
Transcription profiling of Arabidopsis thaliana wild-type plants under a high salinity stress condition
transcription profiling by array
Arabidopsis thaliana
4
17/08/2017
-
173
-
Transcription profiling of the Arabidopsis thaliana srk2abgh quadruple mutant under a high salinity stress condition
transcription profiling by array
Arabidopsis thaliana
4
17/08/2017
-
115
-
A Liver Capsular Network of Monocyte-Derived Macrophages Restricts Hepatic Dissemination of Intraperitoneal Bacteria by Neutrophil Recruitment
transcription profiling by array
Mus musculus
7
16/08/2017
-
117
-
Transcription profiling by array of a novel prostate progenitor cell (LSCmed) in mouse in contrast to prostate luminal and basal stem cells
transcription profiling by array
Mus musculus
9
15/08/2017
-
129
-
Transcription profiling by array of SPEN-expressing and control T47D cells grown in the presence or absence of hormones (Estradiol or Tamoxifen)
transcription profiling by array
Homo sapiens
18
15/08/2017
-
178
-
Transcription profiling by array of MCF-10A cells transfected with Split Ends (SPEN)-silencing or control siRNA
transcription profiling by array
Homo sapiens
6
15/08/2017
-
88
-
Transcription profiling by array of naive CD4+ T cell populations defined by CD25 and CD31 expression
transcription profiling by array
Homo sapiens
90
15/08/2017
-
148
-
Transcription profiling by array of CD20-positive B cells from healthy individuals
transcription profiling by array
Homo sapiens
12
15/08/2017
-
114
-
Transcription profiling by nanostring of human CD4 T cell subsets stratified by complement receptor type 2 (CR2) expression
transcription profiling by array
Homo sapiens
24
15/08/2017
68
-
RNA-seq analysis of transport deficient S. pneumoniae TIGR4 mutants
RNA-seq of coding RNA
Streptococcus pneumoniae
8
14/08/2017
ENA
107
-
Microarray of non-polarized and M1- and M2-polarized canine macrophages in vitro
transcription profiling by array
Canis lupus familiaris
18
10/08/2017
124
-
Transcriptomics during the differentiation of human pluripotent stem cells to hepatocyte-like cells
transcription profiling by array
Homo sapiens
62
09/08/2017
180
-
RNA-seq of whole lungs from Irgm1-/- and wildtype littermates mice that were either uninfected or infected with influenza for 3, 6, or 10 days
RNA-seq of coding RNA
Mus musculus
48
08/08/2017
ENA
167
-
Gene expression profiling in patients with polymyalgia rheumatica before and after symptom abolishing glucocorticoid treatment
transcription profiling by array
Homo sapiens
36
08/08/2017
-
150
-
RNA-seq of chemically reset human naive pluripotent stem cells
RNA-seq of coding RNA
Homo sapiens
30
07/08/2017
-
ENA
188
-
RNA sequencing of T. brucei EATRO1125 expressing RBP10
RNA-seq of coding RNA
Trypanosoma brucei
8
07/08/2017
-
ENA
101
-
Role assessment of the type VI secretion systems during disease interactions of Erwinia amylovora with its plant host by comparing the in planta and in vitro RNA-seq transcriptomes of wildtype CFBP 1430 and its T6SS double mutant (T6-d1d3)
RNA-seq of coding RNA
Erwinia amylovora
4
07/08/2017
-
ENA
94
-
RNA-seq analysis of wild type Columbia seedlings
RNA-seq of coding RNA
Arabidopsis thaliana
3
07/08/2017
-
ENA
140
-
RNAseq analysis of wild type dark grown PSB-D cell cultures
RNA-seq of coding RNA
Arabidopsis thaliana
3
07/08/2017
-
ENA
89
-
Identification of gene expression signature for cigarette smoke exposure response--from man to mouse
transcription profiling by array
Homo sapiens
302
05/08/2017
279
-
Identification of gene expression signature for cigarette smoke exposure response--from man to mouse
transcription profiling by array
Homo sapiens
302
05/08/2017
261
-
COPD progression in C57l/6 mice in response to chronic exposure (up to 7 months) to conventional cigarette smoke or a prototype modified risk tobacco product (pMRTP) and the impact of cessation or switching to pMRTP after initial exposure to conventional cigarette smoke
transcription profiling by array
Mus musculus
194
05/08/2017
226
-
An 8-Month Systems Toxicology Inhalation/Cessation Study in Apoe-/- Mice to Investigate Cardiovascular and Respiratory Exposure Effects of a Candidate Modified Risk Tobacco Product, THS 2.2, Compared With Conventional Cigarettes
transcription profiling by array
Mus musculus
54
05/08/2017
133
-
Transcription profiling of blood from smokers, non-smokers and former smokers to identify gene expression signature for cigarette smoke exposure response
transcription profiling by array
Homo sapiens
89
05/08/2017
177
-
Transcription profiling of blood from smokers (with or without COPD), non-smokers and former smokers to identify gene expression signature for cigarette smoke exposure response
transcription profiling by array
Homo sapiens
233
05/08/2017
397
-
Transcriptional response of LPS-stimulated monocyte-derived macrophages in the presence or absence of the anti-TNF agonist Etanercept
transcription profiling by array
Homo sapiens
18
04/08/2017
177
-
Whole blood transcriptional profiling of healthy volunteers and rheumatoid arthritis patients treated with methotrexate or anti-TNF therapy after ex vivo whole blood stimulation with TNF
transcription profiling by array
Homo sapiens
16
04/08/2017
236
-
Transcriptional profiling of the tuberculin skin test in healthy volunteers and in rheumatoid arthritis patients treated with methotrexate or anti-TNF therapy
transcription profiling by array
Homo sapiens
25
04/08/2017
156
-
Genome variation and conserved regulation identify genomic regions responsible for strain specific phenotypes of metabolic syndrome in rats
RNA-seq of coding RNA
Rattus norvegicus
20
03/08/2017
ENA
132
-
Identification of high-affinity microRNA targets
RIP-seq
Mus musculus
26
03/08/2017
ENA
107
-
RNA-seq analysis of C. elegans CPEB homolog mutants
RNA-seq of coding RNA
Caenorhabditis elegans
27
03/08/2017
-
ENA
114
-
iCLIP analysis of RNA binding sites of Stau2 protein in mouse brain cells
CLIP-seq
Mus musculus
6
02/08/2017
-
ENA
108
-
RNAseq of primary human gallbladder cells, reprogrammed human gallbladder cells, and human pancreatic beta cells
RNA-seq of coding RNA
Homo sapiens
18
02/08/2017
ENA
127
-
microRNAseq of primary human gallbladder cells, reprogrammed human gallbladder cells, and human pancreatic beta cells
microRNA profiling by high throughput sequencing
Homo sapiens
4
02/08/2017
ENA
87
-
Strategies for in vivo screening and mitigation of hepatotoxicity associated with antisense drugs
RNA-seq of coding RNA
Mus musculus
79
02/08/2017
-
ENA
172
-
RNA-Seq of bacteriophage S-PM2d infecting Synechococcus spp. WH7803 at high light and low light treatments
RNA-seq of coding RNA
Synechococcus phage S-PM2
6
01/08/2017
-
ENA
63
-
RNA-seq of human tissues
RNA-seq of coding RNA
Homo sapiens
14
01/08/2017
-
ENA
232
-
RNA-seq of HEK293T cell line
RNA-seq of coding RNA
Homo sapiens
136
01/08/2017
-
ENA
339
-
Targeted sequencing of 86 regulatory elements and 12 breast cancer genes
DNA-seq
Homo sapiens
290
01/08/2017
-
ENA
433
-
ATAC-seq of HEK293T cell line
ATAC-seq
Homo sapiens
14
01/08/2017
-
ENA
207
-
Mutant Cd36 and Wars2 genes affect mass and function of brown adipose tissue in spontaneously hypertensive rats
transcription profiling by array
Rattus norvegicus
128
01/08/2017
-
99
-
Dual RNA-seq of M. tuberculosis H37Rv infecting macrophage-like THP-1 cells during 48h
RNA-seq of coding RNA
Homo sapiens, Mycobacterium tuberculosis H37Rv
42
01/08/2017
-
ENA
312
-
Methylation profiling of end-stage renal disease patients and healthy controls
methylation profiling by array
Homo sapiens
144
01/08/2017
-
178
-
Global mRNA transcriptome analysis of wild type and Hfq mutant strains of Serratia marcescens by RNAseq
RNA-seq of coding RNA
Serratia marcescens
8
01/08/2017
-
ENA
62
-
Comparison of gene expression profiling among high-grade ovarian epithelial cancer, ovarian epithelium and fallopian tube
transcription profiling by array
Homo sapiens
12
01/08/2017
-
153
-
Cross-tissue transcriptomic analysis of human secondary lymphoid organ residing ILC3 reveals a default quiescent state in the absence of inflammation
RNA-seq of coding RNA
Homo sapiens
20
31/07/2017
-
87
-
RNA-seq analysis of date-palms treated with stress hormone ABA compared to controls
RNA-seq of coding RNA
Phoenix dactylifera
8
31/07/2017
-
ENA
117
-
RNAseq of circulating neutrophils in peripartal grazing dairy cows divergent in metabolic health
RNA-seq of coding RNA
Bos taurus
120
30/07/2017
-
ENA
171
-
Transcriptional profiling by array of mouse hearts from animals with heterozygous truncation of Igf1 gene (HZ), or HZ treated with low doses of IGF-1 (substitutive therapy) against wild-type control
transcription profiling by array
Mus musculus
3
30/07/2017
-
67
-
Global Expression profiling of mutant mouse lineage negative progenitors
transcription profiling by array
Mus musculus
10
30/07/2017
-
78
-
Global Expression profiling of mutant mouse lineage negative progenitors
transcription profiling by array
Mus musculus
33
30/07/2017
-
105
-
Global Expression profiling of mutant mouse multipotent progenitors
transcription profiling by array
Mus musculus
28
30/07/2017
-
123
-
Array Comparative Hybridisation of Acute Myeloid Leukemia's generated from mouse models of Npm1cA/+, compound Npm1cA/+; NrasG12D/+ and Npm1cA/+;Flt3ITD/+ myeloid leukemia
comparative genomic hybridization by array
Mus musculus
25
30/07/2017
-
174
-
Effect of a KRAS peptide nucleic acid clamp on the Ion Torrent sequencing protocol
DNA-seq
Homo sapiens
36
29/07/2017
ENA
147
-
RNA-seq analyses of most resistance Indica Rice varieties (Oryza sativa L.) leaves tissue under water-deficit condition
RNA-seq of coding RNA
Oryza sativa Indica Group
4
27/07/2017
-
ENA
93
-
Transcription profiling by microarray of lncRNA affected by EGF stimulation of MCF10A cells
transcription profiling by array
Homo sapiens
15
27/07/2017
169
-
Genes affected by manipulation of LIMT, a novel metastasis inhibiting lncRNA is suppressed by EGF and down-regulated in aggressive breast cancer
transcription profiling by array
Homo sapiens
12
27/07/2017
149
-
Microarray analysis of the effect of ppGpp, cdiAMP, and cdiGMP on Saccharomyces cerevisiae
transcription profiling by array
Saccharomyces cerevisiae
24
26/07/2017
89
-
RNA-seq of coding RNA from DDX6 knockout human haploid (HAP1) cells
RNA-seq of coding RNA
Homo sapiens
8
25/07/2017
ENA
203
-
Haploid genome-wide screens for essential components and negative regulators of interferon lambda signaling in human cells
DNA-seq
Homo sapiens
3
25/07/2017
-
ENA
136
-
RNA-seq of coding RNA from USP14 knockout human haploid (HAP1) cells
RNA-seq of coding RNA
Homo sapiens
8
25/07/2017
ENA
129
-
Analysis of mitochondrial gene expression with Ribosome Profiling
RNA-seq of coding RNA
Homo sapiens
3
25/07/2017
-
ENA
120
-
Cytogenetics 2.7M and Cytoscan HD 2.8M Microarrays in autistic families in the Lebanese population
comparative genomic hybridization by array
Homo sapiens
142
24/07/2017
-
170
-
RNA localization is a key determinant of neurite-enriched proteome - Riboseq
translation profiling
Mus musculus
6
23/07/2017
-
ENA
108
-
RNA localization is a key determinant of neurite-enriched proteome - RNAseq
RNA-seq of coding RNA
Mus musculus
6
23/07/2017
-
ENA
150
-
Whole transcriptome profiling of Esophageal adenocarcinoma and Barrett's
RNA-seq of coding RNA
Homo sapiens
63
23/07/2017
-
ENA
409
Transcriptome profiling by microarray of Caenorhabditis elegans MT2124 x CB4856 RILs used for eQTL mapping
transcription profiling by array
Caenorhabditis elegans
24
21/07/2017
-
124
-
RNA-seq of different Plodia interpunctella tissues for males and females
RNA-seq of coding RNA
Plodia interpunctella
16
19/07/2017
-
ENA
135
-
RNA-seq experiment of Drosophila melanogaster larvae reared on Aspergillus nidulans infested breeding substrate
RNA-seq of coding RNA
Drosophila melanogaster
131
19/07/2017
-
ENA
139
-
Transcription profiling by array of rice cell line N1 treated with herbicide safener fenclorim and its analogue CMP
transcription profiling by array
Oryza sativa Japonica Group
18
18/07/2017
-
109
-
mRNA time-course transcription profiling of bacteriocytes and gut tissue of pea aphids reared on standard artificial diet (AP3) and artificial diet depleted in Tyr and Phe (YFØ)
transcription profiling by array
Acyrthosiphon pisum
66
18/07/2017
-
122
-
RNA-seq of HEK293T cells treated with control b-globin siRNA and Pat1b siRNA
RNA-seq of coding RNA
Homo sapiens
8
17/07/2017
-
ENA
199
-
Glucocorticoid receptor ChIP-seq in an immortalized podocyte cell line
ChIP-seq
Homo sapiens
2
17/07/2017
ENA
113
-
Glucocorticoid therapy regulates podocyte motility by inhibition of Rac1
transcription profiling by array
Homo sapiens
6
17/07/2017
106
-
RNA-seq for splenic gene expression in response to Newcastle disease virus challenge in two chicken lines with different disease resistance
RNA-seq of coding RNA
Gallus gallus
31
16/07/2017
-
ENA
145
-
RNA-seq of different Bombyx mori tissues for males and females
RNA-seq of coding RNA
Bombyx mori
12
16/07/2017
-
ENA
81
-
Determination of mRNA half-lives in embryonic mouse skin
RNA-seq of coding RNA
Mus musculus
12
14/07/2017
-
ENA
149
-
Chipseq on Sox18Ragged-mCherry over-expressed zebrafish larvae at 26-28hpf
ChIP-seq
Danio rerio
2
13/07/2017
ENA
82
-
Whole genome expression changes in Candida albicans due to a mutation in transcription factor Grf10
transcription profiling by array
Candida albicans
3
12/07/2017
-
77
-
MicroRNA profiling by arrray of unilaterial and bilateral retinoblastoma tumours from enucleated patients with no chemotherapy history
microRNA profiling by array
Homo sapiens
12
11/07/2017
155
-
Global gene regulation during immunoglobulin class switching in human activated B cells
transcription profiling by array
Homo sapiens
18
11/07/2017
-
107
-
Transcription profiling of paw skin from young and old mice to study the effect of ageing in interfollicular epidermis
transcription profiling by array
Mus musculus
8
11/07/2017
-
107
-
A UNIQUE ENHANCER BOUNDARY COMPLEX DEFINES THE STABLE POISED STATE OF THE MOUSE RIBOSOMAL RNA GENES IN THE ABSENCE OF RRN3, UBF AND RNA POLYMERASE I TRANSCRIPTION
ChIP-seq, DNA-seq
Mus musculus
78
08/07/2017
ENA
301
-
Transcription profiling of oesophageal adenocarcinoma by RNA-seq
RNA-seq of coding RNA
Homo sapiens
6
07/07/2017
-
ENA
162
-
ATAC-seq of oesophageal cell lines and tissue samples
ATAC-seq, DNA-seq
Homo sapiens
11
07/07/2017
ENA
140
-
ETV1 ChIP-seq in OE33 esophageal adenocarcinoma cells
ChIP-seq
Homo sapiens
3
07/07/2017
ENA
161
-
Transcription profiling of oesophageal adenocarcinoma
transcription profiling by array
Homo sapiens
14
07/07/2017
-
242
-
Signatures of inflammation and impending multiple organ dysfunction in the hyperacute phase of trauma: A prospective cohort study
transcription profiling by array
Homo sapiens
118
06/07/2017
345
-
Transcription profiling by array of single and double deletion mutants involved in ribosome assembly
transcription profiling by array
Saccharomyces cerevisiae
22
06/07/2017
120
-