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Showing 1 - 100 of 71550 experiments
AccessionTitleTypeOrganismAssaysReleasedProcessedRawViewsAtlas
Transcriptome changes in the mice lumbar spinal cord after the 30-day space flight and subsequent 7-day re-adaptation on Earth
transcription profiling by array
Mus musculus
6
08/12/2018
-
-
Transcriptome profiling of human fetal small intestine epithelial cell line FHs 74 int (ATCC CCL-241) in response to human skimmed milk treatment for 12 hours
transcription profiling by array
Homo sapiens
4
07/12/2018
4
-
RNA-seq from cortex and hippocampus of mice harboring heterozygous and homozygous deletion of Kctd13, as well as wild-type controls
RNA-seq of coding RNA
Mus musculus
47
06/12/2018
ENA
13
-
The yeast GG-NER complex evicts histone H2A.Z-containing barrier nucleosomes from CID boundaries during DNA repair
ChIP-seq
Saccharomyces cerevisiae
27
06/12/2018
-
ENA
15
-
Single-cell RNAseq of Tal1 knockout chimeric mouse embryos at embryonic day 8.5 of mouse development
RNA-seq of coding RNA from single cells
Mus musculus
80
05/12/2018
ENA
12
-
Single-cell RNAseq of control chimeric mouse embryos at embryonic days 7.5 and 8.5 of mouse development
RNA-seq of coding RNA from single cells
Mus musculus
120
05/12/2018
ENA
11
-
Single-cell RNA-seq of mouse endothelial cells from three distinct embryonic locations
RNA-seq of coding RNA from single cells
Mus musculus
288
05/12/2018
-
ENA
11
-
Single-cell RNAseq of Tal1 knockout chimeric mouse embryos at embryonic days 7.5 and 8.5 of mouse development
RNA-seq of coding RNA
Mus musculus
128
05/12/2018
-
ENA
13
-
Timecourse single-cell RNAseq of whole mouse embryos harvested between days 6.5 and 8.5 of development
RNA-seq of coding RNA from single cells
Mus musculus
2560
05/12/2018
ENA
12
-
Genome-wide screen for regulators of the yeast pleiotropic drug response
genotyping by array
Saccharomyces cerevisiae S288C
72
05/12/2018
-
16
-
Gene expression microarray analysis of whole intestine from Kaiso-/- mice
transcription profiling by array
Mus musculus
6
05/12/2018
-
22
-
RNA-seq expression profiling of humain MAIT cells in blood and liver as compared to mainstream TCD4+ and TCD8+ cells
RNA-seq of coding RNA
Homo sapiens
24
03/12/2018
ENA
22
-
Microarray expression profiling of NKT and MAIT subsets in different organs of B6-MAIT/CAST mice
transcription profiling by array
Mus musculus
42
03/12/2018
20
-
Transcriptomic study of the pathogenic fungus Aspergillus fumigatus during a murine intranasal infection, using the Whole A. fumigatus Genome Expression 44K v.1 microarray (AWAFUGE)
transcription profiling by array
Aspergillus fumigatus Af293
12
03/12/2018
-
28
-
A genomic biomarker signature can predict skin sensitizers using a cell-based in vitro alternative to animal tests
transcription profiling by array
Homo sapiens
137
02/12/2018
157
-
Comprehensive RNA-Seq Profiling of the Lung Transcriptome of Bashbay Sheep in Response to Experimental Mycoplasma ovipneumoniae Infection
RNA-seq of coding RNA
Ovis aries
9
01/12/2018
-
ENA
40
-
Receptor Tyrosine Kinase pathway activation is sufficient to trigger chordoma in zebrafish
RNA-seq of coding RNA
Danio rerio
6
01/12/2018
-
ENA
35
-
RNA-seq of JAK2VF and DNMT3A mutant Myelofibrosis patients
RNA-seq of coding RNA
Homo sapiens
8
01/12/2018
ENA
48
-
MicroRNA-regulated phase change controls reproductive stem elongation (Experiment M2)
transcription profiling by array
Hordeum vulgare
28
01/12/2018
-
34
-
Survey of RNA viruses present in East African maize with symptoms of maize lethal necrosis
RNA-seq of coding RNA
Zea mays
30
01/12/2018
-
ENA
38
-
RNA-seq of zebrafish larvae fed with different diets
RNA-seq of coding RNA
Danio rerio
4
01/12/2018
-
ENA
36
-
The role of the transcription factors GATA2 and FOXA1 in immortalized basal-like prostate epithelial cells
transcription profiling by array
Homo sapiens
23
01/12/2018
-
29
-
Analysis of mouse T cell transcription profile after co-culture with BaF3 cells with or without the oncogenic point mutation JAK2 V617F
transcription profiling by array
Mus musculus
7
01/12/2018
-
31
-
Transcription profiling of human blood eosinophils in eosinophilic asthma patients compared to healthy individuals
transcription profiling by array
Homo sapiens
6
01/12/2018
30
-
Transcriptional profiling by array of fetal and maternal of mesenchymal stem cell (MSC) populations from human term placenta
transcription profiling by array
Homo sapiens
12
01/12/2018
49
-
RNA-seq of the whole retina of rat intravitreally injected with aldosterone
RNA-seq of coding RNA
Rattus norvegicus
6
30/11/2018
ENA
39
-
Corynebacterium Cell Factory Design and Culture Process Optimization for Muconic Acid Biosynthesis
RNA-seq of coding RNA
Corynebacterium glutamicum
2
30/11/2018
-
ENA
39
-
Comparative transcriptomics of B cell transdifferentiation in human and mouse. RNA-Seq data
RNA-seq of coding RNA
Homo sapiens, Mus musculus
24
30/11/2018
-
ENA
43
-
RNA-seq to investigate differential expression of serotype emm1 Streptococcus pyogenes strains S119 and S126
RNA-seq of coding RNA
Streptococcus pyogenes
12
30/11/2018
-
ENA
28
-
Transcription start site profiling of a Streptococcus pyogenes emm1 strain
RNA-seq of coding RNA
Streptococcus pyogenes
2
30/11/2018
-
ENA
34
-
Genomic encoding of transcriptional burst kinetics
RNA-seq of coding RNA from single cells
Mus musculus
480
30/11/2018
-
ENA
30
-
Inducible defense response of C. cinerea against its fungiverous nematode A. avenae in microfluidics device
RNA-seq of coding RNA
Coprinopsis cinerea
12
30/11/2018
ENA
31
-
RNA-seq of mid-gestation mouse mammary tissues from E12.5 stage organs
RNA-seq of coding RNA
Mus musculus
24
30/11/2018
-
ENA
24
-
RNA-seq of embryonic mammary progenitor cell lines (part A)
RNA-seq of coding RNA
Mus musculus
46
30/11/2018
-
ENA
35
-
Embryonic mouse mammary progenitor cells +/-Sox9
RNA-seq of coding RNA
Mus musculus
12
30/11/2018
-
ENA
30
-
Opposing Role of Dpf2 and Eed on Differentiation of Mouse Embryonic Stem Cells via Regulating Tbx3 (4C)
4C
Mus musculus
4
30/11/2018
-
ENA
24
-
Opposing Role of Dpf2 and Eed on Differentiation of Mouse Embryonic Stem Cells via Regulating Tbx3 (RNA-seq)
RNA-seq of coding RNA
Mus musculus
4
30/11/2018
-
ENA
32
-
Role of Anlotinib-induced CCL2 decrease in anti-angiogensis and response prediction for Non-Small Cell Lung Cancer therapy
RNA-seq of coding RNA
Homo sapiens
4
30/11/2018
-
ENA
26
-
Low input Hi-C datasets for a diffuse large B-cell lymphoma sample, healthy control human B-cells and mouse embryonic stem cells
Hi-C
Homo sapiens, Mus musculus
16
30/11/2018
ENA
233
-
Investigating epigenetic effects of activation-induced deaminase in chronic lymphocytic leukemia
methylation profiling by array
Homo sapiens
16
29/11/2018
28
-
Single-cell RNA-seq of mouse developing spinal cord
RNA-seq of coding RNA from single cells
Mus musculus
23
29/11/2018
ENA
19
-
RNA-Seq of full-length RNA from worker and royal jelly of honey bees (Apis mellifera)
RNA-seq of non coding RNA
Apis mellifera
6
29/11/2018
-
ENA
25
-
Response of Escherichia coli after Phage T4 Ghost Adsorption
transcription profiling by array
Escherichia coli K-12
8
29/11/2018
-
15
-
Methylation profiling of human trophoblast organoids providing a model for maternal-fetal interactions in early pregnancy and placenta tissue for comparison
methylation profiling by array
Homo sapiens
18
28/11/2018
-
30
-
Comparison of the gene expression profile of a wild type Pseudo-nitzschia multistriata strain and a strain displaying sex reversal
RNA-seq of coding RNA
Pseudo-nitzschia multistriata
4
28/11/2018
-
ENA
20
-
Transcriptomic profile of human placenta derived trophoblast organoid cultures with its tissue of origin, human placental villi
transcription profiling by array
Homo sapiens
18
28/11/2018
67
-
RNA sequencing of Mus musculus T helper cell type 2 with retroviral overexpression of different genes
RNA-seq of coding RNA
Mus musculus
156
27/11/2018
-
ENA
17
-
RNA-seq of the prototrophic non-hyphal smooth-33 mutant (FKP514) and its prototrophic control strain (FKP391)
RNA-seq of coding RNA
Yarrowia lipolytica
5
26/11/2018
-
ENA
21
-
Transcriptomic profiles of two sponge species upon exposure to microbial-associated molecular patterns (lipopolysaccharide and peptidoglycan) compared against control (sterile artificial seawater)
RNA-seq of coding RNA
Aplysina aerophoba, Dysidea avara
35
26/11/2018
ENA
22
-
Transcription profiling of colon mucosa from HLAB27 transgenic rats fed extra-virgin olive oil rich in polyphenols
transcription profiling by array
Rattus norvegicus
3
26/11/2018
-
18
-
Sparse feature selection methods identify unexpected global cellular response to strontium-containing materials
transcription profiling by array
Homo sapiens
75
25/11/2018
23
-
RNA-seq of 36 individuals with autism spectrum disorder
RNA-seq of coding RNA
Homo sapiens
36
25/11/2018
ENA
20
-
ChIP-seq of Mus musculus T helper cell type 2 with retroviral overexpression of Bhlhe40 and Pparg
ChIP-seq
Mus musculus
4
23/11/2018
-
ENA
37
-
Opposing Role of Dpf2 and Eed on Differentiation of Mouse Embryonic Stem Cells via Regulating Tbx3 (ChIP-seq)
ChIP-seq
Mus musculus
39
23/11/2018
-
ENA
30
-
RNA-Seq of Danionine species
RNA-seq of coding RNA
Danio aesculapii, Danio albolineatus, Danio rerio
13
22/11/2018
-
ENA
-
-
ChIP-seq of beta-catenin in TCF/LEF or beta-cetenin knockout HEK293T cells to study TCF/LEF dependent and independent regulation of Wnt/beta-catenin transcription
ChIP-seq
Homo sapiens
13
22/11/2018
-
ENA
26
-
Bisulphite-seq to investigate the proto CpG island methylator phenotype of sessile serrated adenoma/polyps
Bisulfite-seq
Homo sapiens
62
22/11/2018
-
ENA
26
-
RNA-seq to investigate the proto CpG island methylator phenotype of sessile serrated adenoma/polyps
RNA-seq of coding RNA
Homo sapiens
62
22/11/2018
-
ENA
25
-
Bisulphite-seq to investigate the proto CpG island methylator phenotype of sessile serrated adenoma/polyps, dataset 2
Bisulfite-seq
Homo sapiens
12
22/11/2018
-
ENA
27
-
RNA-seq expression profiling upon DDX3X or DDX54 knockdown in human breast cancer MCF7 cells
RNA-seq of coding RNA
Homo sapiens
15
21/11/2018
-
ENA
55
-
iCLIP of DDX3X and DDX54 in human breast cancer MCF7 cells
CLIP-seq
Homo sapiens
6
21/11/2018
-
ENA
42
-
Transcription profiling of fibroblasts from a Friedreich Ataxia patient to identify genes involved in Friedreich Ataxia pathophysiology
transcription profiling by array
Homo sapiens
6
21/11/2018
-
32
-
Transcription profiling by array of rat experimental tumours to study the effects of dietary lipids
transcription profiling by array
Rattus norvegicus
30
21/11/2018
-
30
-
Microarray of Saccharomyces cerevisiae grown by inoculation into 2nM rapamycin against untreated cultures
transcription profiling by array
Saccharomyces cerevisiae
16
20/11/2018
-
30
-
Transcriptional profiling of long-term stimulated primary murine intestinal fibroblasts with interleukin-36
RNA-seq of coding RNA
Mus musculus
6
19/11/2018
-
ENA
35
-
Identifying the fitness cost of rifampicin-resistance in Mycobacterium tuberculosis through RNAseq profiling
RNA-seq of coding RNA
Mycobacterium tuberculosis
36
18/11/2018
ENA
43
-
ChIP-chip of primary hippocampal neurons treated with lead against non-treated controls
transcription profiling by array
Rattus norvegicus
6
17/11/2018
-
40
-
RNA-seq comparison of fetal lung and cultured fetal lung derived organoids with pluripotent stem cell derived lung organoids
RNA-seq of coding RNA
Homo sapiens
31
17/11/2018
-
ENA
37
-
Transcriptomics study on the effect of alternative oxidase expression in Bcs1l mutant (S78G) mice (Mus musculus)
RNA-seq of coding RNA
Mus musculus
288
16/11/2018
-
ENA
53
-
Gene expression profiling of patients from the Danish Center for Translational Breast Cancer Research program
transcription profiling by array
Homo sapiens
94
16/11/2018
32
-
Single-cell transcriptional analysis reveals ILC-like cells in zebrafish
RNA-seq of coding RNA from single cells
Danio rerio
4
16/11/2018
-
ENA
33
-
Single-cell transcriptional analysis reveals innate lymphoid cell (ILC)-like cells in zebrafish
RNA-seq of coding RNA from single cells
Danio rerio
1056
16/11/2018
-
ENA
36
-
Transcription profiling by array to investigate susceptibility to multiple azole resistance in Candida glabrata
transcription profiling by array
[Candida] glabrata
8
16/11/2018
-
34
-
RNASeq of multiple Mycoplasma species in wild-type condition including: Mycoplasma pneumoniae, Mycoplasma genitalium, Mycoplasma hyopneumoniae, Mycoplasma capricolum, Mycoplasma gallisepticum, Mycoplasma mycoides
RNA-seq of coding RNA
Mycoplasma capricolum subsp. capricolum ATCC 27343, Mycoplasma gallisepticum str. R(high), Mycoplasma genitalium G37, Mycoplasma hyopneumoniae 168, Mycoplasma mycoides subsp. capri LC str. 95010, Mycoplasma pneumoniae M129
11
16/11/2018
-
ENA
35
-
Single-cell phenotyping and RNA sequencing reveal novel patterns of gene expression heterogeneity and regulation during growth and stress adaptation in a unicellular eukaryote
RNA-seq of coding RNA from single cells
Schizosaccharomyces pombe
2806
14/11/2018
-
ENA
43
-
The effect of micronutrient supplementation on growth and hepatic metabolism in diploid and triploid Atlantic salmon (Salmo salar) parr fed a low marine ingredient diet
transcription profiling by array
Salmo salar
36
14/11/2018
-
43
-
RNA-seq of adipose tissue from pigs divergent in feed efficiency reveals variations in adipose growth, extracellular matrix formation, lipid metabolism and immune response
RNA-seq of coding RNA
Sus scrofa
20
14/11/2018
-
ENA
37
-
MDA-MB-231/1833 bone-metastatic breast cancer cell gene expression after conditioning in conditioned medium from HUVECs conditioned in conditioned medium from static and flow-stimulated MLO-Y4 osteocytes
RNA-seq of coding RNA
Homo sapiens
8
13/11/2018
ENA
40
-
RNA-seq study on time of day specific Glucocorticoid action in mouse liver and lung tissues
RNA-seq of coding RNA
Mus musculus
32
13/11/2018
-
ENA
43
-
RNASeq data analysis of wild type and reverb alpha knockout cells from mouse liver, at different time points, with or without DEX treatment
RNA-seq of coding RNA
Mus musculus
40
13/11/2018
-
ENA
34
-
Histone H3K27ac ChIP-seq binding regions in mouse liver
ChIP-seq
Mus musculus
16
13/11/2018
ENA
31
-
ZEB1 ChIP-seq Data from Control CD8+cDC1
ChIP-seq
Mus musculus
1
13/11/2018
-
ENA
26
-
RNA-seq from ZEB1 Knockdown and Control CD8+cDC1
RNA-seq of coding RNA
Mus musculus
12
13/11/2018
-
ENA
28
-
RNA-seq of human fibroblast cell cultures treated with resveratrol against DMSO treated controls, with and without siRNA treatment targeting SIRT1
RNA-seq of coding RNA
Homo sapiens
8
12/11/2018
ENA
36
-
Selenite treatment of a Candida albicans wild type strain
transcription profiling by array
Candida albicans
32
12/11/2018
-
29
-
Selenite treatment of a Debaryomyces hansenii wild type strain
transcription profiling by array
Debaryomyces hansenii
32
12/11/2018
-
30
-
Selenite treatment of a Kluyveromyces lactis wild type strain
transcription profiling by array
Kluyveromyces lactis
32
12/11/2018
-
29
-
Selenite treatment of a Lachancea kluyveri wild type strain
transcription profiling by array
Lachancea kluyveri
32
12/11/2018
-
28
-
Selenite treatment of a Lachancea thermotolerans wild type strain
transcription profiling by array
Lachancea thermotolerans
32
12/11/2018
-
24
-
Selenite treatment of a Yarrowia lipolytica wild type strain
transcription profiling by array
Yarrowia lipolytica
32
12/11/2018
-
21
-
Transcriptome analyses of the response of C. glabrata wild type cells to iron excess, salt excess, cadmium treatment and iron starvation
transcription profiling by array
[Candida] glabrata
16
12/11/2018
-
20
-
Transcriptome analyses of a C. glabrata strain deleted for the transcription factor Aft2
transcription profiling by array
[Candida] glabrata
8
12/11/2018
-
23
-
Selenite treatment of a Candida glabrata wild type strain
transcription profiling by array
[Candida] glabrata
32
12/11/2018
-
21
-
Selenite treatment of a Saccharomyces cerevisiae wild type strain
transcription profiling by array
Saccharomyces cerevisiae
32
12/11/2018
-
20
-
RNA-seq of wild type Mycobacterium smegmatis mc2 155 (exponential and stationary phase) and Ms1 deletion strain (exponential and stationary phase)
RNA-seq of coding RNA
Mycolicibacterium smegmatis
12
12/11/2018
-
ENA
28
-
Single cell RNA-seq of mouse skin cells
RNA-seq of coding RNA from single cells
Mus musculus
2
11/11/2018
-
ENA
35
-
High content imaging in the screening of biomaterial-induced MSC behavior
transcription profiling by array
Homo sapiens
12
10/11/2018
23
-
Ribosome profiling of NEW1 knock-out of budding yeast Saccharomyces cerevisiae
RNA-seq of coding RNA
Saccharomyces cerevisiae
12
10/11/2018
-
ENA
25
-
Salicylic acid-induced gene expression in wild-type Col-0 and mutant upl3-4 Arabidopsis thaliana plants
RNA-seq of coding RNA
Arabidopsis thaliana
11
09/11/2018
-
ENA
51
-
ChIP-Seq of H3K4me3 in primary unstimulated monocyte subsets from 2 healthy donors buffy coats
ChIP-seq
Homo sapiens
12
09/11/2018
-
ENA
28
-