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Showing 1 - 100 of 70988 experiments
AccessionTitleTypeOrganismAssaysReleasedProcessedRawViewsAtlas
RNAseq of whole ovarian follicles from young and old mice
RNA-seq of coding RNA
Mus musculus
48
Yesterday
-
ENA
-
-
Microarray of formalin-fixed, paraffin-embedded uninvolved terminal ileal tissue obtained from ileo-colic resection surgeries of Crohn’s disease and control patients
transcription profiling by array
Homo sapiens
136
Yesterday
-
-
-
RNA-seq of formalin-fixed, paraffin-embedded uninvolved terminal ileal tissue obtained from ileo-colic resection surgeries of Crohns disease and control patients
RNA-seq of coding RNA
Homo sapiens
68
Yesterday
ENA
-
-
RNA-seq on Hesx1+/+ and Hesx1-/- ES cells deprived of 2i/LIF for 24 hours
RNA-seq of coding RNA
Mus musculus
5
21/05/2018
-
ENA
1
-
PUF2 and UBP1 RNAi and pull-down in Trypanosoma brucei
RNA-seq of coding RNA
Trypanosoma brucei
6
21/05/2018
-
ENA
-
-
MIRNA - Integrative multi-omics survey of effects carbon-based engineered nanomaterials on lung derived cell-lines
transcription profiling by array
Homo sapiens
91
19/05/2018
9
-
DNA-METHYLATION - Integrative multi-omics survey of effects carbon-based engineered nanomaterials on lung derived cell-lines
transcription profiling by array
Homo sapiens
198
19/05/2018
9
-
MRNA-Integrative multi-omics survey of effects carbon-based engineered nanomaterials on lung derived cell-lines
transcription profiling by array
Homo sapiens
64
19/05/2018
11
-
Regulation of total and polysomal RNA expression in rat neonatal cardiac myocytes by H2O2
transcription profiling by array
Rattus norvegicus
16
17/05/2018
-
17
-
Haploid genetic screen for components of MLKL-mediated cell death
DNA-seq
Homo sapiens
2
16/05/2018
-
ENA
45
-
RNA-seq analysis of Arabidopsis sulki1, Kas-2 and Ler/Kas-2 near isogenic line (NIL)
RNA-seq of coding RNA
Arabidopsis thaliana
9
16/05/2018
-
ENA
28
-
RNA-Seq of human aortic endothelial cells with lysophosphatidylinositol against untreated controls
RNA-seq of coding RNA
Homo sapiens
6
16/05/2018
-
ENA
23
-
RNA-Seq of human aortic endothelial cells with lysophosphatidylcholine against untreated controls
RNA-seq of coding RNA
Homo sapiens
2
16/05/2018
-
ENA
19
-
Microarray transcription profiling of healthy and PVYNTN infected potato tuber tissues (necrotic and non-necrotic)
transcription profiling by array
Solanum tuberosum
16
16/05/2018
17
-
Ribosome profiling and RNA sequencing of ED fibroblast cells in response to infection by equine torovirus, Berne strain
RNA-seq of coding RNA
Equus caballus
10
15/05/2018
-
ENA
16
-
Transcriptome analysis of khd-1, spen-1 and hub1-4 Arabidopsis mutants
RNA-seq of coding RNA
Arabidopsis thaliana
12
14/05/2018
ENA
51
-
BCL-2 levels do not predict azathioprine treatment response in inflammatory bowel disease, but inhibition induces lymphocyte apoptosis and ameliorates colitis in mice
RNA-seq of coding RNA
Homo sapiens
6
14/05/2018
ENA
42
-
Identification of the Tetracycline dependent genes in Salmonella enterica serovar Typhimurium SL1344 (R27)
transcription profiling by array
Salmonella enterica subsp. enterica serovar Typhimurium str. SL1344
6
14/05/2018
-
24
-
RNA-seq of the anterior third (head) region of fifty pooled danio rerio embryos at the 15-somite stage following crispld2 morpholino knockdown compared to uninjected controls
RNA-seq of coding RNA
Danio rerio
2
13/05/2018
ENA
24
-
RNA-seq of myocytes from mice treated in vivo for 3 days with vehicle, angiotensin II, or phenylephrine
RNA-seq of coding RNA
Mus musculus
14
12/05/2018
ENA
35
-
Whole-genome methylation analysis (450k) of school aged children prenatally exposed to alcohol vs controls
methylation profiling by array
Homo sapiens
358
12/05/2018
29
-
Transcription profiling by RNA-seq of Arabidopsis thaliana (Col-0) cell lines following light exposure to study chloroplast development
RNA-seq of coding RNA
Arabidopsis thaliana
24
12/05/2018
-
ENA
29
-
Illumina Infinium HumanMethylation450 BeadChip profiling of paediatric high grade gliomas from the HERBY clinical trial
methylation profiling by array
Homo sapiens
164
11/05/2018
-
47
-
Variation in RNA expression in a panel of 30 breast cancer cell lines
RNA-seq of coding RNA
Homo sapiens
30
11/05/2018
ENA
121
-
Expression profiling of mouse CD4+ T cells following Klf1 retrovirus vector transfection
RNA-seq of coding RNA
Mus musculus
12
10/05/2018
-
ENA
28
-
RNA-Seq of seed dormancy in red rice
RNA-seq of coding RNA
Oryza sativa
18
10/05/2018
-
ENA
48
-
Effects on adult testis of Sertoli cell-specific ablation of miR-17-92 in mouse embryos
RNA-seq of coding RNA
Mus musculus
6
10/05/2018
-
ENA
28
-
Transcription profiling by array of 60 pre-chemotherapy FFPE endoscopic oesophageal adenocarcinoma biopsies
transcription profiling by array
Homo sapiens
63
10/05/2018
-
38
-
Transcriptional profiling of human bronchial epithelial cell BEAS-2B exposed to diesel and biomass ultrafine particles
RNA-seq of coding RNA
Homo sapiens
45
09/05/2018
ENA
62
-
Gene expression data from 10 untreated human colon cancer cell lines
transcription profiling by array
Homo sapiens
20
08/05/2018
77
-
Single-cell RNA-seq of murine medullary thymic epithelial cells (mTECs)
RNA-seq of coding RNA from single cells
Mus musculus
164
08/05/2018
ENA
54
-
Thioredoxin DCC1 regulates shoot regeneration through modulating multiple genes expression by RNA-seq analyses in Arabidopsis
RNA-seq of coding RNA
Arabidopsis thaliana
6
06/05/2018
ENA
55
-
The expression profiles of miRNAs in H. pylori infected esophageal cells were analyzed by microarray
microRNA profiling by array
Homo sapiens
4
05/05/2018
-
56
-
RNA-seq of peri-infarct cortex of the rat dMCAO model of ischemic stroke treated with AAV7-hMANF or AAV7-GFP
RNA-seq of coding RNA
Rattus norvegicus
10
04/05/2018
-
ENA
64
-
RNA-seq of human ovarian adenocarcinoma cell line SKOV3 treated with bisphenol A (10 or 100 nM) against untreated controls
RNA-seq of coding RNA
Homo sapiens
9
04/05/2018
-
ENA
84
-
Single cell RNA-seq of WTC-CRISPRi human induced pluripotent stem cells
RNA-seq of coding RNA from single cells
Homo sapiens
5
03/05/2018
-
78
-
RNA-seq of HeLa-MZ cells treated with Wnt3a conditioned media for 0, 2 and 6 hours
RNA-seq of coding RNA
Homo sapiens
29
01/05/2018
-
ENA
92
-
RNA-seq to investigate differentially expressed genes in KPC mouse PDAC treated with CSF-1R small molecule inhibitor AZD7507 and/or the CXCR2 small molecule inhibitor AZD5069
RNA-seq of coding RNA
Mus musculus
58
01/05/2018
-
ENA
59
-
Transcriptome 3' end profiling by high throughput sequencing of HeLa cells depleted of MATR3, PTBP1/2 individually or in combination
RNA-seq of coding RNA
Homo sapiens
20
01/05/2018
-
ENA
48
-
4SU-iCLIP of PTBP1 from HEK293 cells with or without MATR3 depletion
RNA-seq of coding RNA
Homo sapiens
4
01/05/2018
-
ENA
39
-
iCLIP of MATR3 from C57BL/6J wildtype mice
CLIP-seq
Mus musculus
7
01/05/2018
-
ENA
39
-
Transciptome time course of Arabidopsis stigma senescence
RNA-seq of coding RNA
Arabidopsis thaliana
9
01/05/2018
-
ENA
38
-
4SU-iCLIP of MATR3 from HEK293 cells with or without PTBP1 depletion
CLIP-seq
Homo sapiens
3
01/05/2018
-
ENA
38
-
Transcriptome profiling by high throughput sequencing of HeLa cells depleted of MATR3, PTBP1/2 individually or in combination by siRNA
RNA-seq of coding RNA
Homo sapiens
36
01/05/2018
-
ENA
73
-
Transcriptional profiling of tfap2a;tfap2c loss of function in zebrafish single whole embryos at 15 somites post fertilisation
RNA-seq of coding RNA
Danio rerio
360
01/05/2018
ENA
49
-
RNA-seq to investigate host response in resistant versus susceptible breeds of Gallus gallus to Newcastle disease virus challenge in the Harderian gland transcriptome
RNA-seq of coding RNA
Gallus gallus
94
01/05/2018
-
ENA
37
-
Atp4b-Cre;Cdh1(fl/fl);Kras(LSL-G12D/+);Trp53(fl/fl);Rosa26(LSL-YFP/LSL-YFP) mouse stomach vs. Atp4b-Cre;Cdh1(fl/+);Kras(LSL-G12D/+);Trp53(fl/fl);Rosa26(LSL-YFP/LSL-YFP) mouse stomach microarray
transcription profiling by array
Mus musculus
8
01/05/2018
71
-
RNA-seq of mouse adipose stem and progenitor cells
RNA-seq of coding RNA
Mus musculus
10
01/05/2018
ENA
36
-
scRNA-seq of mouse adipose stem and progenitor cells
RNA-seq of coding RNA from single cells
Mus musculus
288
01/05/2018
ENA
39
-
3' RNA-seq of CD142+/- mouse adipose stem and progenitor cells
RNA-seq of coding RNA
Mus musculus
50
01/05/2018
ENA
37
-
3' RNA-seq of CD142+/- human adipose stem and progenitor cells
RNA-seq of coding RNA
Homo sapiens
12
01/05/2018
ENA
30
-
Comparative transcriptome analysis of a lowly virulent strain of Erwinia amylovora in shoots of two apple cultivars susceptible and resistant to fire blight
RNA-seq of coding RNA
Erwinia amylovora
30
01/05/2018
-
ENA
31
-
RNA-seq of barley lines after dehydration, spider mite or combined stress
RNA-seq of coding RNA
Hordeum vulgare subsp. vulgare
12
30/04/2018
-
ENA
36
-
ChIP-seq of IDS1-myc using Oryza sativa seedlings
ChIP-seq
Oryza sativa Japonica Group
4
30/04/2018
ENA
23
-
DNA methylation profiling of BEAS-2B cells exposed to low doses of Ag nanoparticles for 6 weeks
methylation profiling by array
Homo sapiens
6
30/04/2018
-
25
-
RNA-Seq of BEAS-2B cells treated with low doses of Ag nanoparticles for 6 weeks
RNA-seq of coding RNA
Homo sapiens
13
30/04/2018
ENA
30
-
Examination of tumor samples obtained after laparoscopic supracervical hysterectomy and a derivative leiomyosarcoma
comparative genomic hybridization by array
Homo sapiens
10
30/04/2018
-
28
-
Transcriptional response of Pseudomonas aeruginosa PAO1 to NaClO
transcription profiling by array
Pseudomonas aeruginosa PAO1
4
30/04/2018
-
38
-
RNA-seq of Pseudomonas aeruginosa PAO1 planktonic and biofilm cells treated with coumarin
RNA-seq of coding RNA
Pseudomonas aeruginosa PAO1
12
29/04/2018
-
ENA
46
-
Genetic Engineering of indica Rice with AtDREB1A Gene for enhanced Abiotic Stress Tolerance
transcription profiling by array
Oryza sativa Indica Group
8
29/04/2018
-
20
-
Ultra-deep sequencing of plasma DNA identifies druggable mutations in hepatocellular carcinoma
genotyping by high throughput sequencing
Homo sapiens
40
29/04/2018
-
ENA
49
-
Gene expression profile in human monocytes treated with IgG from APS patients or IgG from controls
transcription profiling by array
Homo sapiens
22
28/04/2018
-
34
-
Identification of cis-eQTLs in six immune cell types CD4, CD8, CD14,CD15, CD19, PLA and ileal, colonic and rectal biopsies in 323 healthy European individuals (CEDAR cohort)
transcription profiling by array
Homo sapiens
2967
28/04/2018
-
71
-
Genotyping of 323 healthy Europeans blood samples (CEDAR cohort) for cis-eQTL analysis in 6 immune cell types and ileal, colonic and rectal biopsies
genotyping by array
Homo sapiens
692
28/04/2018
-
31
-
Transcriptome profiling during interactions between food-spoilage-associated lactic acid bacteria: Leuconostoc gelidum, Lactococcus piscium and Lactobacillus oligofermentans
RNA-seq of coding RNA
Lactobacillus oligofermentans LMG 22743T, Lactobacillus oligofermentans LMG 22743T + Lactococcus piscium MKFS47, Lactobacillus oligofermentans LMG 22743T + Lactococcus piscium MKFS47 + Leuconostoc gelidum subsp. gasicomitatum LMG 18811T, Lactococcus piscium MKFS47, Lactococcus piscium MKFS47 + Leuconostoc gelidum subsp. gasicomitatum LMG 18811T, Leuconostoc gelidum subsp. gasicomitatum LMG 18811T, Leuconostoc gelidum subsp. gasicomitatum LMG 18811T + Lactobacillus oligofermentans LMG 22743T
71
27/04/2018
-
ENA
32
-
RNAseq of old and young Macrotermes bellicosus (Blattodea, Isoptera) individuals
RNA-seq of coding RNA
Macrotermes bellicosus
36
26/04/2018
-
ENA
43
-
Transcription profiling by array time course of Arabidopsis thaliana Ler-1 plants with STM RNAi knock down or overexpression compared to controls
transcription profiling by array
Arabidopsis thaliana
30
26/04/2018
-
45
-
Ampliseq transcriptomic array of REF seq. genes in Snai1 knock out triple negative breast cancer cells
RNA-seq of coding RNA
Homo sapiens
6
25/04/2018
-
ENA
84
-
Ampliseq transcriptomic array of REF seq. genes in ZEB1 knock out triple negative breast cancer cells
RNA-seq of coding RNA
Homo sapiens
6
25/04/2018
-
ENA
50
-
ChIP-sequencing of Snai1 transcription factor in triple negative breast cancer cell line Hs578T
ChIP-seq
Homo sapiens
4
25/04/2018
-
ENA
50
-
ChIP-sequencing of ZEB1 in triple negative breast cancer cell line Hs578T
ChIP-seq
Homo sapiens
4
25/04/2018
-
ENA
56
-
Transcription profiling of human primary bone cells exposed to Staphylococcus aureus
transcription profiling by array
Homo sapiens
6
24/04/2018
-
48
-
Jak kinase inhibition in mouse adipocyte progenitors
transcription profiling by array
Mus musculus
12
24/04/2018
-
31
-
Microarray of ZEB1 Loss-of-Function in NCH421K cells
transcription profiling by array
Homo sapiens
6
24/04/2018
47
-
ChIP-seq for Zeb1 in Human Neural Stem Cells and Glioblastoma Cancer Stem-like Cells
ChIP-seq
Homo sapiens
2
24/04/2018
ENA
48
-
Transcription profiling by array to investigate gene expression changes caused by TNF-alpha induced fusion of human M13SV1-Cre breast epithelial cells and MDA-MB-435-pFDR1 breast cancer cells during normoxia and hypoxia
transcription profiling by array
Homo sapiens
8
23/04/2018
-
41
-
Transcriptional Profiling of Synovium in a Porcine Model of Early Post-traumatic Osteoarthritis
RNA-seq of coding RNA
Sus scrofa
42
21/04/2018
-
ENA
60
-
Biochemical Efficacy and Safety Trial of Vitamin D: dose-finding, placebo-controlled, randomised clinical trial assessing effects of high dose vitamin D
transcription profiling by array
Homo sapiens
574
21/04/2018
43
-
RNA sequencing of chicken limb distal mesenchyme cells to compare gene expression over time and in heterochronic grafted cells
RNA-seq of coding RNA
Gallus gallus
12
20/04/2018
ENA
57
-
Single cell RNA-seq of isolated human foetal L/M-opsin cone photoreceptor populations labelled using the AAV2/9.pR2.1.GFP reporter
RNA-seq of coding RNA from single cells
Homo sapiens
295
20/04/2018
-
ENA
62
-
RNA-seq of isolated human foetal and hiPSC L/M-opsin cone photoreceptor populations labelled using the AAV2/9.pR2.1.GFP reporter
RNA-seq of coding RNA
Homo sapiens
95
20/04/2018
-
ENA
63
-
Morphine treatment leads to temporal modulation of the gut microbiome
DNA-seq
mouse gut metagenome
64
16/04/2018
-
ENA
62
-
Morphine treatment induces distinct changes in the gut microbiome at day 3 post treatment
DNA-seq
mouse gut metagenome
16
16/04/2018
-
ENA
49
-
Microarray analysis of human pediatric omental biopsies obtained from uremic patients, patients on peritoneal dialysis or healthy controls
transcription profiling by array
Homo sapiens
19
12/04/2018
-
76
-
Genome-wide profiling of H3K27ac (ChIP-seq) in IMR90 cells
ChIP-seq
Homo sapiens
4
12/04/2018
ENA
69
-
Genome-wide profiling of CTCF binding (ChIP-seq) in A549 and U2OS cells
ChIP-seq
Homo sapiens
4
12/04/2018
ENA
71
-
Circularized chromosome conformation capture (4C-seq) in A549 and U2OS cells stably expressing rat GR
4C
Homo sapiens
4
12/04/2018
ENA
63
-
RNA Sequencing of Adamantinomatous Craniopharyngioma
RNA-seq of coding RNA
Homo sapiens
24
11/04/2018
ENA
117
-
Laser Capture Microdissection and RNA Sequencing Human Adamantinomatous Craniopharyngioma
RNA-seq of coding RNA
Homo sapiens
8
11/04/2018
ENA
85
-
IL-17A treatment of mouse primary colonic epithelial spheroids in 3 differentiation states
transcription profiling by array
Mus musculus
24
10/04/2018
-
59
-
Rat-CHTP1.2-Experiment
transcription profiling by array
Rattus norvegicus
79
10/04/2018
47
-
Systems toxicology assessment of CHTP1.2 [Lung Data]
transcription profiling by array
Rattus norvegicus
70
10/04/2018
47
-
Systems toxicology assessment of CHTP1.2 [Liver Data]
transcription profiling by array
Rattus norvegicus
83
10/04/2018
40
-
Changes in nitrogen availability lead to a reprogramming of pyruvate metabolism
transcription profiling by array
Hordeum vulgare
15
09/04/2018
11
-
RNA-seq of Streptomyces coelicolor and Streptomyces davawensis including a dodecin gene deletion variant in response to plumbagin treatment
RNA-seq of coding RNA
Streptomyces coelicolor A3(2), Streptomyces davaonensis JCM 4913
12
07/04/2018
-
ENA
56
-
ATAC-seq of oesophageal adenocarcinoma cell line MFD-1
ATAC-seq
Homo sapiens
2
06/04/2018
-
ENA
12
-
RNA-seq to investigate how human-specific Notch2 paralogs expand cortical neurogenesis through regulation of Delta/Notch interactions
RNA-seq of coding RNA
Homo sapiens
11
06/04/2018
EGA
80
-
Transcription profiling by array of mouse primary hepatocytes from wild type and Xpa-/-p53+/- strains treated with carcinogens
transcription profiling by array
Mus musculus
114
06/04/2018
121
-
Transcriptome analysis of Huntington disease and control cerebral organoids at day 45 and 105 of differentiation
transcription profiling by array
Homo sapiens
15
05/04/2018
-
65
-
Single-molecule sequencing of maize and sorghum developmental tissues
RNA-seq of coding RNA
Sorghum bicolor, Zea mays
16
05/04/2018
-
ENA
72
-