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AccessionTitleTypeOrganismAssaysReleasedProcessedRawViewsAtlas
ChIPseq of Myocyte Enhancer Factor 2 in neonatal rat cardiomyocytes to distinguish MEF2 binding sites
ChIP-seq
Rattus norvegicus
4
Today
ENA
1
-
RNA-seq of hypoxic and normoxic soybean roots (cultivars: Embrapa 45 and BR 4)
RNA-seq of coding RNA
Glycine max
12
Today
ENA
8
-
Diurnal gills transcriptome of the oyster Crassostrea gigas fed with non-harmful and harmful algae
RNA-seq of coding RNA
Crassostrea gigas
52
Yesterday
-
ENA
15
-
Transcription profiling of primary monocytes in human donors suffering from rheumatoid arthritis compared to healthy controls
transcription profiling by array
Homo sapiens
5
19/11/2017
-
-
-
Hypoxia and Intrinsic Transcriptomic Subtyping of Soft Tissue Sarcoma
RNA-seq of coding RNA
Homo sapiens
40
17/11/2017
-
ENA
14
-
Single-cell RNA-Seq data of zebrafish blood cells
RNA-seq of coding RNA from single cells
Danio rerio
2015
17/11/2017
-
ENA
29
-
RNAseq analysis of microaerobic and aerobic cultures of Pseudomonas extremaustrali
RNA-seq of coding RNA
Pseudomonas extremaustralis
4
17/11/2017
-
ENA
17
-
Mating system manipulation and the evolution of sex-biased gene expression in Drosophila
RNA-seq of coding RNA
Drosophila pseudoobscura bogotana
96
17/11/2017
-
ENA
21
-
Transcription profiling by array of genetically engineered murine hepatoma Hepa8F5 cells with eight doxycylcline-inducible liver-enriched transcription factors to study transcription response under induced high liver function
transcription profiling by array
Mus musculus
5
15/11/2017
-
43
-
RNA-Seq analysis of Arabidopsis heterozygous mutant of gene (AT1G31870), which encodes a pre-mRNA-splicing factor of RES complex protein against the wild type (Col)
RNA-seq of coding RNA
Arabidopsis thaliana
4
11/11/2017
-
ENA
53
-
Transcriptome analysis of myeloid cells (neutrophils, macrophages and dendritic cells) isolated from the spinal cord of mice with experimental autoimmune encephalomyelitis (EAE)
transcription profiling by array
Mus musculus
8
10/11/2017
57
-
Terminus DNA loss in the Escherichia coli
DNA-seq
Escherichia coli str. K-12 substr. MG1655
15
10/11/2017
ENA
46
-
Transcriptional profiling of Th1, Th2, Th9, and Th17 T cell clones
RNA-seq of coding RNA
Homo sapiens
67
10/11/2017
-
ENA
78
-
Transcriptomic characterization of the human cell cycle in individual unsynchronized cells
RNA-seq of coding RNA from single cells
Homo sapiens
96
09/11/2017
ENA
131
-
Population transcriptomics in Daphnia galeata
RNA-seq of coding RNA
Daphnia galeata galeata
72
08/11/2017
-
ENA
75
-
RNA-seq of mouse alveolar macrophages sorted from CD11cCre/+ Tgfbr2fl/fl and control Tgfbr2fl/fl neonatal mice
RNA-seq of coding RNA
Mus musculus
8
08/11/2017
ENA
77
-
Transcription profiling by RNA-seq of murine hearts at different developmental stages and adult mice with ischemia/reperfusion injury
RNA-seq of coding RNA
Mus musculus
18
08/11/2017
-
ENA
70
-
DNA-seq of ELMSeq reporter cassette
DNA-seq
Mycoplasma pneumoniae
18
08/11/2017
-
ENA
53
-
Transcription profiling by high throughput sequencing of
RNA-seq of coding RNA
Mus musculus
11
08/11/2017
-
ENA
323
-
Transcriptome regulating differentiation from the early human embryonic distal foregut
RNA-seq of coding RNA
Homo sapiens
6
07/11/2017
-
103
-
Toxicity of the main electronic cigarette components, propylene glycol, glycerin and nicotine in Sprague Dawley rats in a 90-day OECD inhalation study complemented with molecular endpoints (RNE)
transcription profiling by array
Rattus norvegicus
48
03/11/2017
124
-
Toxicity of the main electronic cigarette components, propylene glycol, glycerin and nicotine in Sprague Dawley rats in a 90-day OECD inhalation study complemented with molecular endpoints (Lung)
transcription profiling by array
Rattus norvegicus
48
03/11/2017
85
-
Toxicity of Toxicity of the main electronic cigarette components, propylene glycol, glycerin and nicotine in Sprague Dawley rats in a 90-day OECD inhalation study complemented with molecular endpoints (Liver)
transcription profiling by array
Rattus norvegicus
32
03/11/2017
95
-
Transcription profiling by array of blood mononuclear cells of human volunteers subjected to heat stress
transcription profiling by array
Homo sapiens
45
01/11/2017
22
-
Determination by ChIP-chip of the binding sites of the developmental transcription regulator BldC in the genome of Streptomyces venezuelae ATCC 10712
ChIP-chip by array
Streptomyces venezuelae
4
01/11/2017
97
-
Microarray evaluation of in vitro cultured Sox9+ mouse lung progenitors isolated from E12.5 embryonic lung progenitors
transcription profiling by array
Mus musculus
11
01/11/2017
-
98
-
RNA-seq of in vitro cultured Sox9+ mouse lung progenitors cells from E12.5 embryos compared to freshly isolated cells and control adult lung epithelial cells
RNA-seq of coding RNA
Mus musculus
80
01/11/2017
-
ENA
130
-
Expression differences between zebrafish embryos lacking b3glct and wildtype sibs
transcription profiling by array
Danio rerio
12
01/11/2017
85
-
Transcription profiling by array of differential gene expression in chicken primary B cells infected ex vivo with attenuated and very virulent strains of infectious bursal disease virus (IBDV)
transcription profiling by array
Gallus gallus
9
01/11/2017
100
-
RNA-seq of pooled Arabidopsis thaliana inflorescences of miRNA function related HWS overexpressors, mutants and transgenic lines
RNA-seq of coding RNA
Arabidopsis thaliana
12
01/11/2017
-
ENA
86
-
RNA-seq of human colorectal cancer cell line COLO320DM treated with the secretome of irradiated or control cancer-associated fibroblasts for 6 or 48 hours
RNA-seq of coding RNA
Homo sapiens
96
01/11/2017
-
ENA
235
-
ChIP-Seq of the Streptomyces venezuelae regulator BldD and its D116A mutant
ChIP-seq
Streptomyces venezuelae
4
01/11/2017
ENA
83
-
Gene expression comparison of olfactory neurosphere-derived cells, fibroblasts and induced pluripotent stem cells derived from the same schizophrenic donors
transcription profiling by array
Homo sapiens
30
01/11/2017
-
123
-
RNASeq profiling of AZD8186-treated HCC70 xenografts
RNA-seq of coding RNA
Homo sapiens
6
01/11/2017
ENA
163
-
RNAseq of human Ewing, MSC, fibroblast cell lines - A side population of Ewing cells exhibits stem cell properties
RNA-seq of coding RNA
Homo sapiens
22
31/10/2017
ENA
172
-
DNA-seq of multiple myeloma patient with chromothripsis 18 and rapid progression into extramedullary relapse
DNA-seq
Homo sapiens
1
31/10/2017
ENA
98
-
Comparative genomic hybridization by array of multiple myeloma patient with rapid extramedullary relapse and chromothripsis 18
comparative genomic hybridization by array
Homo sapiens
1
31/10/2017
-
103
-
RNA-seq of coding RNA from human purified intestinal epithelial samples and organoids derived from paediatric gut, feotal gut and induced pluripotent stem cells
RNA-seq of coding RNA
Homo sapiens
50
31/10/2017
-
ENA
146
-
DNA methylation array of human purified intestinal epithelial samples and organoids from paediatric and foetal small and large intestine
methylation profiling by array
Homo sapiens
134
31/10/2017
-
146
-
Transcription profiling by array to investigate interferon gene expression changes in Macaca fascicularis upon infection with Simian immunodeficiency virus
transcription profiling by array
Macaca fascicularis
54
30/10/2017
-
82
-
Gene expression in cells encapsulated within different types of alginate microcapsules
transcription profiling by array
Mus musculus
7
30/10/2017
-
53
-
Microarray gene expression analysis for Escherichia coli O157:H7 (EHEC) and its luxS-deficient mutant strain in osmotic stress condition
transcription profiling by array
Escherichia coli O157:H7 str. EDL933
4
30/10/2017
-
95
-
Cortical transcriptome of female mice treated with vehicle or estrogen and subjected to hypoxia
RNA-seq of coding RNA
Mus musculus
8
30/10/2017
-
ENA
76
-
microRNA response of Galleria mellonella to Listeria monocytogenes infection: a powerful method to predict protein function in mammals exemplified by the autophagy adaptor optineurin
transcription profiling by array
Galleria mellonella, Galleria mellonella and Listeria monocytogenes
6
30/10/2017
48
-
Genome-wide identification of urinary cell-free microRNAs for non-invasive detection of bladder cancer
microRNA profiling by array
Homo sapiens
31
29/10/2017
-
161
-
RNA-sequencing of human cervical cancer HeLa cells treated with splicing inhibitors Sudemycin C1, Sudemycin K, Spliceostatin A or control DMSO
RNA-seq of coding RNA
Homo sapiens
24
29/10/2017
-
ENA
136
-
MicroRNA array profiling on human pluripotent stem cell-derived cardiomyocytes exposed to doxorubicin
microRNA profiling by array
Homo sapiens
51
28/10/2017
125
-
RNA-Sequencing of wild type and UCP1-null beige adipose tissue
RNA-seq of coding RNA
Mus musculus
12
28/10/2017
-
ENA
120
-
B1 C57BL6 wild type versus B1 IL-10 Knockout
transcription profiling by array
Mus musculus
6
28/10/2017
160
-
RNA-seq of the thermophilic biomass-degrading fungus Malbranchea cinnamomea FCH 10.5 when grown on glucose, wheat bran and beechwood xylan
RNA-seq of coding RNA
Malbranchea cinnamomea
30
27/10/2017
-
ENA
133
-
Transcription profiling by array of Streptomyces coelicolor A3(2) M145 vs a ∆sco2127 mutant in modified R5 media
transcription profiling by array
Streptomyces coelicolor A3(2)
4
27/10/2017
88
-
An application of a systems toxicology approach using a human organotypic small airway cultures for a comparative assessment between a candidate modified-risk tobacco product aerosol and cigarette smoke (mRNA data)
transcription profiling by array
Homo sapiens
214
26/10/2017
152
-
An application of a systems toxicology approach using a human organotypic small airway cultures for a comparative assessment between a candidate modified-risk tobacco product aerosol and cigarette smoke
microRNA profiling by array
Homo sapiens
215
26/10/2017
159
-
An RNASeq normal tissue atlas for mouse and rat
RNA-seq of coding RNA
Mus musculus, Rattus norvegicus
77
25/10/2017
ENA
302
-
Global gene expression analysis of OsmiRNA156 over expression switchgrass lines
transcription profiling by array
Panicum virgatum
20
25/10/2017
-
93
-
Gene expression profile of murine Bone marrow derived Dendritic cells stimulated with CD40L in absence or presence of Neural Precursor cell- conditioned medium
transcription profiling by array
Mus musculus
18
25/10/2017
86
-
A novel TetR-like transcriptional regulator is induced in acid-nitrosative stress and controls expression of an efflux pump in mycobacteria
transcription profiling by array
Mycobacterium smegmatis
8
24/10/2017
-
86
-
Transcription profiling by array of liver from diploid and triploid Atlantic salmon fed with marine or vegetable-based diet during early development
transcription profiling by array
Salmo salar
24
24/10/2017
-
115
-
High-throughput RNA sequencing of six ant transcriptomes
RNA-seq of coding RNA
Formica fusca, Lasius flavus, Lasius neglectus, Lasius niger, Myrmica scabrinodis
6
24/10/2017
-
ENA
94
-
Epigenomic changes associated with TGF-beta induced EMT in MDCK cells
ChIP-seq
Canis lupus familiaris
8
23/10/2017
ENA
105
-
RNA-seq of TGF-beta induced and histone variant H2A.Z-knocked-down canine MDCK cells in epithelial-to-mesenchymal transition (EMT)
RNA-seq of coding RNA
Canis lupus familiaris
9
23/10/2017
ENA
107
-
Transcription profiling by array of rat primary hepatic stellate cells with varying degrees of in vitro activation
transcription profiling by array
Rattus norvegicus
12
23/10/2017
-
87
-
Gene expression profiling of bronchoalveolar lavage cells during Aspergillus colonization of the lung allograft
transcription profiling by array
Homo sapiens
22
22/10/2017
182
-
Transcriptional profiling of articular cartilage in a porcine model of early post-traumatic osteoarthritis
RNA-seq of coding RNA
Sus scrofa
42
22/10/2017
-
ENA
123
-
DNA methylation profiling of intestinal epithelial cells from paediatric biopsies including Inflammatory Bowel disease and healthy controls
methylation profiling by array
Homo sapiens
215
20/10/2017
-
240
-
Gene expression response in peripheral blood cells of petroleum workers exposed to very low benzene levels
transcription profiling by array
Homo sapiens
45
19/10/2017
-
318
-
Paraneoplastic Cerebellar Degeneration (PCD) related ovarian cancer transcriptomic analysis
transcription profiling by array
Homo sapiens
12
18/10/2017
206
-
Microarray of Human astrocytes transduced with lentivirus expressing FGFR3-TACC3 treated with vehicle, FGFR3-TACC3 treated with the FGFR inhibitor PD173074 for 12h, FGFR3-TACC3-K508M treated with vehicle or empty vector treated with vehicle
transcription profiling by array
Homo sapiens
16
17/10/2017
-
124
-
Microarray transcription of murine lung and uterine group 2 innate lymphoid cells (ILC2s) cultured in vitro with or without 17beta-estradiol (estrogen, E2)
transcription profiling by array
Mus musculus
9
17/10/2017
137
-
Gene expression profiles new methotrexate resistant cell lines for the study of gestational trophoblastic neoplasia
transcription profiling by array
Homo sapiens
6
17/10/2017
128
-
P63-alpha specific ChIP-seq in E13.5/E14.5 mouse palatal shelves
ChIP-seq
Mus musculus
1
17/10/2017
ENA
99
-
Overexpression of c-Jun in mouse Schwann cells of uninjured nerves
RNA-seq of coding RNA
Mus musculus
12
16/10/2017
ENA
90
-
Gene expression after fetal intestinal obstruction on rat model
transcription profiling by array
Rattus norvegicus
20
16/10/2017
-
101
-
Extravillous trophoblast and endothelial cell crosstalk mediates leukocyte infiltration to the early remodelling decidual spiral arteriole wall
transcription profiling by array
Homo sapiens
2
16/10/2017
131
-
Resistant and susceptible chicken lines show distinctive responses to Newcastle disease virus infection in the lung transcriptome
RNA-seq of coding RNA
Gallus gallus
48
14/10/2017
-
ENA
168
-
mRNA-seq based gene expression profiling of differentiating murine brown preadipocytes (IBA)
RNA-seq of coding RNA
Mus musculus
14
14/10/2017
-
ENA
104
-
Transcriptome profiling of short-term response to chilling stress in resistant and susceptible rice seedlings
RNA-seq of coding RNA
Oryza sativa Japonica Group
18
13/10/2017
-
ENA
148
-
Factor VII activating protease (FSAP) regulates the expression of inflammatory genes in vascular smooth muscle and endothelial cells
transcription profiling by array
Homo sapiens
12
13/10/2017
-
139
-
Effect of stress on the binding affinity of yeast eIF4F components to their target RNAs
RIP-seq, RNA-seq of coding RNA
Saccharomyces cerevisiae
54
11/10/2017
-
ENA
182
-
Transcription controls growth, cell kinetics and cholesterol supply to sustain ACTH responses
transcription profiling by array
Mus musculus
11
11/10/2017
135
-
RNA-Seq analysis of gene expression divergence in mammalian liver
RNA-seq of coding RNA
Balaenoptera borealis, Bos taurus, Callithrix jacchus, Canis familiaris, Cavia porcellus, Chlorocebus aethiops sabaeus, Daubentonia madagascarensis, Delphinus delphis, Felis catus, Heterocephalus glaber, Homo sapiens, Lagenorhynchus albirostris, Lemur catta, Macaca mulatta, Mesoplodon bidens, Microcebus murinus, Monodelphis domestica, Mustela putorius furo, Nycticebus coucang, Oryctolagus cuniculus, Otolemur garnettii, Rattus norvegicus, Sarcophilus harrisii, Sus scrofa, Tupaia belangeri
63
11/10/2017
ENA
244
-
Origins of MLL cancer stem cells govern leukemic self-renewal mediated by -catenin and Hoxa9
RNA-seq of coding RNA
Mus musculus
72
10/10/2017
-
ENA
264
-
Gene expression profiling of ventilation induced muscle wasting in rat diaphragm and intercostal
RNA-seq of coding RNA
Rattus norvegicus
25
08/10/2017
-
ENA
129
-
Single cell RNA sequencing of stem cell-derived retinal ganglion cells
RNA-seq of coding RNA from single cells
Homo sapiens
2
07/10/2017
-
173
-
Genome-wide analysis of long non-coding RNA expression in the mouse Pilocarpine model of temporal lobe epilepsy
transcription profiling by array
Mus musculus
8
06/10/2017
-
135
-
miRNA anlysis of extracellular vesicles (EV) secreted by embryonic stem cell-derived cardiovascular progenitor cells (hES-CPg) which recapitulate the therapeutic effects of these cells in a model of chronic heart failure (CHF)
microRNA profiling by array
Mus musculus
6
06/10/2017
-
137
-
Extracellular vesicles (EV) secreted by embryonic stem cell-derived cardiovascular progenitor cells (hES-CPg) recapitulate the therapeutic effects of these cells in a model of chronic heart failure (CHF)
transcription profiling by array
Mus musculus
38
06/10/2017
-
152
-
Oxygen-dependent changes in gene expression in Campylobacter jejuni NCTC 11168
transcription profiling by array
Campylobacter jejuni subsp. jejuni NCTC 11168
19
04/10/2017
-
165
-
RNA-Seq of human regulatory T cells and effector T cells cultured at standard 37C temperature and in mild hypothermia (33C)
RNA-seq of coding RNA
Homo sapiens
9
04/10/2017
ENA
141
-
Integrated host and viral transcriptome analysis by RNA-seq of specific pathogen-free chicken infected with Avian leukosis virus
RNA-seq of coding RNA, RNA-seq of non coding RNA
Gallus gallus
12
04/10/2017
-
ENA
144
-
Liver Transcriptome Response to Hyperthermia Stress in Three Distinct Chicken Lines
RNA-seq of coding RNA
Gallus gallus
48
04/10/2017
-
ENA
151
-
Gene expression profiles of H16N2 cells expressing EZH2 variants
RNA-seq of coding RNA
Homo sapiens
18
04/10/2017
-
ENA
108
-
microRNA array of extracellular vesicles isolated from the conditioned culture medium of HL60 cells and their chemo-resistant counterparts (HL-60/AR)
microRNA profiling by array
Homo sapiens
2
03/10/2017
205
-
Functional and transcriptional heterogeneity of human hemopoietic lympho-myeloid progenitors
RNA-seq of coding RNA
Homo sapiens
28
03/10/2017
-
ENA
151
-
DNAseq of human Ewing cell line - CADO-ES1
DNA-seq
Homo sapiens
12
02/10/2017
ENA
204
-
Transcription profiling of wild type and XY Nrg1 knock out male pooled embryonic gonads to decipher the role of this gene in sexual differentiation
RNA-seq of coding RNA
Mus musculus
8
02/10/2017
ENA
123
-
Fe ions and X-ray radiation exposure of Est2-immortalised human coronary artery endothelial cells - 1 day and 7 days post-irradiation
transcription profiling by array
Homo sapiens
24
02/10/2017
-
124
-
Transcriptome of S2 cells after depletion of the PAF1 complex component Atu/Leo1
RNA-seq of coding RNA
Drosophila melanogaster
6
02/10/2017
-
ENA
103
-
Myc binding to target sites in S2 cells (ChIPseq) in response to knockdown of Myc or the PAF1 complex component Atu/Leo1
ChIP-seq
Drosophila melanogaster
3
02/10/2017
-
ENA
104
-
Myc-dependent transcriptome of Drosophila L3 larval wing imaginal discs, and its dependency on Max and/or the PAF1 complex component Atu/Leo1
RNA-seq of coding RNA
Drosophila melanogaster
24
02/10/2017
-
ENA
99
-
RNA-seq of the zebrafish (danio rerio) brain after developmental exposure to 17-ethinylestradiol
RNA-seq of coding RNA
Danio rerio
12
02/10/2017
ENA
110
-
Salt stress in salt sensitive Oryza sativa Indica group Pokkali (salt sensitive)
RNA-seq of coding RNA
Oryza sativa Indica group
30
02/10/2017
-
ENA
112
-
Salt stress in salt sensitive Oryza sativa Indica group IR29
RNA-seq of coding RNA
Oryza sativa Indica group
30
02/10/2017
-
ENA
145
-
Tandem mass tag (TMT) quantification data from knee chondrocytes for 12 osteoarthritis patients, comparing disease tissue against control tissue in each individual
proteomic profiling by mass spectrometer
Homo sapiens
24
01/10/2017
-
128
-
Transcriptome profiling of radiation-transformed breast cells after TRPS1 siRNA knockdown
transcription profiling by array
Homo sapiens
24
01/10/2017
-
251
-
RNA-seq of the nematode Ascaridia galli exposed to flubendazole against untreated control
RNA-seq of coding RNA
Ascaridia galli
6
01/10/2017
-
ENA
125
-
RNAseq of wild-type and giantin knockout retinal pigment epithelial cell lines
RNA-seq of coding RNA
Homo sapiens
6
01/10/2017
-
ENA
106
-
Gene expression analysis of root tissue from rice grown on arsenite-spiked sediments
transcription profiling by array
Oryza sativa Indica Group
60
01/10/2017
-
156
-
Protein microarray (Protoarray, Invitrogen) screening with APECED patient, healthy relative and healthy control serum samples
proteomic profiling by array
Homo sapiens
120
01/10/2017
182
-
Global gene expression profiling of endothelial colony-forming cells from term and preterm neonates
transcription profiling by array
Homo sapiens
15
01/10/2017
115
-
Time course Chromatin Immunoprecipitation on Drosophila virilis embryos during embryogenesis
ChIP-seq
Drosophila virilis
40
01/10/2017
-
ENA
113
-
Kinome analysis of CD151 overexpressing Jurkat T cells
proteomic profiling by array
Homo sapiens
2
30/09/2017
-
133
-
Kinome analysis of human CD151+ and CD151- T cells in the absence or presence of IL-2 stimulation
proteomic profiling by array
Homo sapiens
4
30/09/2017
-
90
-
ChIP-seq of the multiple antibiotic resistance activator (MarA) protein and RNA polymerase sigma70 subunit of Enterotoxigenic Escherichia coli strain H10407
ChIP-seq
Escherichia coli
12
30/09/2017
-
ENA
92
-
Transcriptomic profiling in the animal model of multiple sclerosis
transcription profiling by array
Mus musculus
14
30/09/2017
-
109
-
Peripheral blood gene expression profiling in multiple sclerosis
transcription profiling by array
Homo sapiens
76
30/09/2017
-
250
-
Transcriptome analysis of melon-Fusarium oxysporum f. sp. melonis race 1.2 pathosystem using RNA-Sequencing
RNA-seq of coding RNA
Cucumis melo
16
30/09/2017
-
ENA
91
-
Peripheral blood gene expression profiling in multiple sclerosis
transcription profiling by array
Homo sapiens
182
30/09/2017
277
-
Transcription profiling by array of the effects of offshore saturation diving and antioxidant vitamins on human blood
transcription profiling by array
Homo sapiens
40
30/09/2017
-
164
-
Methylation profiling by array of pancreas from ductal adenocarcinoma patients and healthy controls
methylation profiling by array
Homo sapiens
24
30/09/2017
-
181
-
Transcription profiling of mice breast cancer cells with and without the introduction of PTEN pseudogene
transcription profiling by array
Mus musculus
16
30/09/2017
-
249
-
Functionally conserved non-coding regulators of cardiomyocyte proliferation and regeneration in mouse and human
RNA-seq of coding RNA, RNA-seq of non coding RNA
Mus musculus
78
30/09/2017
-
ENA
192
-
Gene expression profiles of human cancer cells UMSCC47, SCC090, and U2OS treated or not with 3 uM of 5-azacytidine for 48h
transcription profiling by array
Homo sapiens
18
29/09/2017
151
-
RNA-seq of barley lines overexpressing or silencing HvPap-1 gene
RNA-seq of coding RNA
Hordeum vulgare subsp. vulgare
9
29/09/2017
-
ENA
76
-
Global gene expression levels in wild-type (Col-0), med18 and med25 mutant lines of Arabidopsis thaliana
transcription profiling by array
Arabidopsis thaliana
9
29/09/2017
-
110
-
Illumina Infinium HumanMethylation450 BeadChip profiling of paediatric high grade gliomas and diffuse intrinsic pontine gliomas
methylation profiling by array
Homo sapiens
206
28/09/2017
-
333
-
Large-scale study of total and polysomial mRNA after DDX6 depletion in HEK293 cells
RNA-seq of coding RNA
Homo sapiens
12
28/09/2017
ENA
103
-
RNA-seq comparison of Clostridium acetobutylicum wild-type and pks mutant under batch fermentation conditions
RNA-seq of coding RNA
Clostridium acetobutylicum
6
27/09/2017
-
ENA
91
-
Microarray profiling of mESCs differentiation time course toward neuronal lineage
transcription profiling by array
Mus musculus
12
27/09/2017
-
126
-
Microarray analysis of pancreatic islets from mice treated with adenovirus containing constitutively active mutant of MEK1 against mice treated with control adenovirus containing LacZ
transcription profiling by array
Mus musculus
11
26/09/2017
98
-
ChIP-seq for Meis on mouse branchial arches at E11.5
ChIP-seq
Mus musculus
8
25/09/2017
-
ENA
122
-
ChIP-seq for Gata6 and histone H3K27Ac on mouse branchial arches at E11.5
ChIP-seq
Mus musculus
12
25/09/2017
ENA
119
-
RNA-seq analysis of branchial arches and outflow tract of the mouse embryo at E10.5 and E11.5
RNA-seq of coding RNA
Mus musculus
8
25/09/2017
-
ENA
143
-
The transcription of long non-coding RNAs is regulated by EGF in MCF10A cell line
RNA-seq of coding RNA
Homo sapiens
6
25/09/2017
-
ENA
168
-
MeDIP profiling by high-throughput sequencing of Primary Human Hepatocytes (PHH) exposed to Valproic Acid (VPA) for 5 days daily and 5 days daily exposure followed by 3 days washout
MeDIP-seq
Homo sapiens
24
25/09/2017
-
ENA
160
-
Sanger Genomics of Drug Sensitivity in Cancer Project (GDSC) RNA-seq cancer cell line gene expression data
RNA-seq of coding RNA
Homo sapiens
462
25/09/2017
-
EGA
823
Transcription profiling of pneumonia lung tissue of H1N1 influenza infected mice
transcription profiling by array
Mus musculus
22
25/09/2017
97
-
Comparison of seven single cell Whole Genome Amplification commercial kits using targeted sequencing
genotyping by high throughput sequencing
Homo sapiens
190
24/09/2017
-
ENA
242
-
RNA-seq of Drosophila melanogaster gut to investigate the effect FKH shRNA knockdown and reduced insulin signalling activity
RNA-seq of coding RNA
Drosophila melanogaster
12
23/09/2017
-
ENA
143
-
Transcription profiling by array of peripheral blood mononuclear cells from patients suffering from Burkholderia pseudomallei induced sepsis exposed to heat inactivated B. pseudomallei or one of its antigens
transcription profiling by array
Homo sapiens
60
22/09/2017
166
-
Transcription profiling by array of four human tonsil-derived B cell populations
transcription profiling by array
Homo sapiens
8
22/09/2017
-
121
-
Barcoded mRNA-seq of murine brown preadipocytes (IBA) upon transcriptomic perturbation
RNA-seq of coding RNA
Mus musculus
23
21/09/2017
-
ENA
103
-
ChIP-seq based genome wide profiling of the histone mark H3K27ac and transcription factor Nuclear Factor 1 (NFI) in a differentiating murine brown preadipocyte cell line (IBA)
ChIP-seq
Mus musculus
14
21/09/2017
-
ENA
98
-
RNA-seq of retina from 6 pairs of litter-matched Bhlhe23-/- and wild type mice at postnatal day 7
RNA-seq of coding RNA
Mus musculus
12
20/09/2017
-
ENA
126
-
Comparison of the retinal transcriptomes of four Bhlhe23-/- mice and 4 sex and litter-matched wild type mice
transcription profiling by array
Mus musculus
8
20/09/2017
-
113
-
Microarray expression analysis of hearts of zebrafish tremblor mutants at 48 hpf compared to wild-type siblings
transcription profiling by array
Danio rerio
6
20/09/2017
86
-
RNA sequencing 10.5 dpc Rathke''s pouch with deletion of Shh
RNA-seq of coding RNA
Mus musculus
4
19/09/2017
-
ENA
122
-
A single therapeutic early-in-life antibiotic course alters host immunologic development
RNA-seq of coding RNA
Mus musculus
16
19/09/2017
-
ENA
173
-
ChIP-seq of FliA binding sites in wild-type Salmonella enterica serovar Typhimurium
ChIP-seq
Salmonella enterica subsp. enterica serovar Typhimurium
4
18/09/2017
-
ENA
104
-
RNA-seq of coding RNA wild type and fliA deletion mutant strains of Salmonella enterica serovar Typhimurium
RNA-seq of coding RNA
Salmonella enterica subsp. enterica serovar Typhimurium
4
18/09/2017
-
ENA
93
-
Marker Frequency analysis on Escherichia coli RecB mutants
DNA-seq
Escherichia coli str. K-12 substr. MG1655
38
18/09/2017
ENA
129
-
Single-cell RNA-sequencing of Platynereis dumerilii
RNA-seq of coding RNA from single cells
Platynereis dumerilii
383
18/09/2017
-
ENA
296
-
RNA-Seq of Pichia pastoris GS115 to determine the effect of inducing heterologous expression of human lysozyme (HuLy) variants
RNA-seq of coding RNA
Pichia pastoris
8
17/09/2017
ENA
142
-
Methylation profiling by array shows that mIDH-associated DNA hypermethylation in acute myeloid leukemia reflects differentiation blockage rather than inhibition of TET-mediated demethylation
methylation profiling by array
Homo sapiens
16
15/09/2017
-
189
-
RNA-seq of Gordonia rubripertincta CWB2 to uncover the styrene specific degradation pathway
RNA-seq of coding RNA
Gordonia rubripertincta
13
15/09/2017
-
ENA
135
-
CAGE transcriptomes on EBV transformed lymphoblastoid cell lines from central European individuals
RNA-seq of coding RNA
Homo sapiens
154
15/09/2017
-
ENA
221
-
Defining Immune Heterogeneity in HNSCC with RNAseq
RNA-seq of coding RNA
Homo sapiens
45
15/09/2017
-
256
-
Gene expression profile analysis of MEC cells transfected with p66Shc coding sequence (MEC-p66)
transcription profiling by array
Homo sapiens
4
14/09/2017
160
-
CD38-NAD+ Immuno-Metabolic Axis Regulates Potent Anti-Tumor T Response
transcription profiling by array
Mus musculus domesticus
9
13/09/2017
99
-
Transcription profiling by array of wild type mouse hippocampi from 186 animals of both genders and two background strains (C57Bl/6 and 129s5) between the ages of 58 to 600 days
transcription profiling by array
Mus musculus
186
13/09/2017
-
266
-
Timecourse gene expression microarray analysis of bi-allelic targeted Setdb1 mutant mouse ES cells, comparing cells with one inducible conditional (floxed) null allele and a second constitutive null allele, to control mouse ES cell lines
transcription profiling by array
Mus musculus
30
12/09/2017
-
128
-
Gene expression microarray of: 1) Cbx1 null versus revertant (single allele expression), and 2) Jarid2 null versus revertant, mutant mouse ES cells
transcription profiling by array
Mus musculus
18
12/09/2017
-
112
-
Irisin is a Pro-Myogenic Factor that Induces Skeletal Muscle Hypertrophy and Rescues Denervation-Induced Atrophy
transcription profiling by array
Mus musculus
8
11/09/2017
-
114
-
RNA-Seq of murine lung endothelial cells stimulated with IFN-gamma and dexamethasone
RNA-seq of coding RNA
Mus musculus
12
11/09/2017
ENA
128
RNAseq timecourse of rat neurons at hours (0, 2, 4, 8, 16, and 24) after treatment with BDNF, with & without ATF4 knockdown
RNA-seq of coding RNA
Rattus norvegicus
24
09/09/2017
-
ENA
126
-
Microarray gene expression analysis of T-cell prolymphocytic leukemia (T-PLL) patient samples
transcription profiling by array
Homo sapiens
12
08/09/2017
228
-
nCounter (NanoString) expression analysis of CD19+CD27-IgD- and CD19+CD27+IgD- B cells cultured with plasmacytoid dendritic cells and RNA containing immune complexes in vitro for 6 days
transcription profiling by array
Homo sapiens
20
07/09/2017
103
-
Effects of cycloheximide (CHX) on ribosome profiling experiments in Schizosaccharomyces pombe
RNA-seq of coding RNA
Schizosaccharomyces pombe
16
05/09/2017
-
ENA
143
-
Cross-reactive antibodies enhance live attenuated virus infection for increased immunogenicity
transcription profiling by array
Homo sapiens
180
05/09/2017
271
-
RNA-Seq of Brachypodium distachyon callus treated with methyl-jasmonate
RNA-seq of coding RNA
Brachypodium distachyon
32
04/09/2017
-
ENA
154
-
Expression data from tumor tissue-derived long-term-cultured breast cancer stem cells
RNA-seq of coding RNA
Homo sapiens
4
04/09/2017
ENA
228
-
Comparing the transcriptome profiling of ob/ob mice treated with the GLP-1 receptor agonist liraglutide, a clinically used GLP-1 receptor agonist, versus baseline controls
RNA-seq of coding RNA
Mus musculus
17
03/09/2017
-
ENA
115
-
The transcriptional regulator LysG of Mycobacterium tuberculosis activates lysE in a lysine-dependent manner
RNA-seq of coding RNA
Mycobacterium tuberculosis
7
03/09/2017
-
ENA
103
-
Acetyl-H4 chIP-seq of control, NaBu-treated, and random behavioral clusters of zebrafish 8 dpf larvae
ChIP-seq
Danio rerio
11
01/09/2017
ENA
92
-
RNA-seq of wheat leaves and roots in response to Xanthomonas translucens infection
RNA-seq of coding RNA
Triticum aestivum
12
01/09/2017
-
ENA
85
RNA-seq of human intestinal organoids colonized with E. coli and other immature intestinal tissues
RNA-seq of coding RNA
Homo sapiens
72
01/09/2017
-
ENA
155
-
Differential gene expression analysis comparing vehicle (DMSO) versus KHS101 in glioblastoma cells
transcription profiling by array
Homo sapiens
4
01/09/2017
-
158
-
Microarray of zebrafish (Danio rerio) sfpq-/-;Tg(mnx1:GFP) against sfpq+/+;Tg(mnx1:GFP) and sfpq+/-;Tg(mnx1:GFP) siblings at 24 hpf
transcription profiling by array
Danio rerio
6
01/09/2017
-
95
-
RNA-Seq of purified P-bodies from HEK293 cells
RNA-seq of coding RNA
Homo sapiens
6
01/09/2017
-
ENA
129
-
Microarray analysis of rat hippocampal microvessels at acute time points following focused ultrasound-induced increase in blood-brain barrier permeability
transcription profiling by array
Rattus norvegicus
21
01/09/2017
-
88
-
RNA-Seq analysis of mouse dopamine neurons identifies transcriptional repression of PlexinC1 by Lmx1a and Lmx1b
RNA-seq of coding RNA
Mus musculus
14
31/08/2017
-
ENA
136
Expression data of CD11b+ cells isolated from WT and C3aR knockout mice after CTX injury
RNA-seq of coding RNA
Mus musculus
4
31/08/2017
-
ENA
84
-
The role of HvCBP20 in drought response in barley
transcription profiling by array
Hordeum vulgare
18
31/08/2017
87
-
RNA-microarray analysis of PLB-985 cells cultured with or without interferon-gamma under both conditions that induce or do not induce cell differentiation
transcription profiling by array
Homo sapiens
24
31/08/2017
-
161
-
Transcriptome sequencing of the bovine parasite Trypanosoma (Megatrypanum) theileri
RNA-seq of coding RNA
Trypanosoma theileri
2
31/08/2017
-
ENA
74
-
Microarray gene expression profiling of the whole brain hemisphere in the rats with C6-glioma tumor
transcription profiling by array
Rattus norvegicus
7
31/08/2017
-
132
-
Transcription profiling of heart tissue from mice overexpressing integrin α11 or wild type controls
transcription profiling by array
Mus musculus
12
31/08/2017
-
73
-
Changes in the coding/non-coding transcriptome and DNA methylome that define the Schwann cell repair phenotype after nerve injury
RNA-seq of coding RNA
Mus musculus domesticus
27
30/08/2017
-
ENA
165
-
Different Behavioral Responses in Male and Female Mice Following a Perinatal Low Protein Diet Associates With Sex-Specific Regulation of Immediate Early Genes and Neuropeptide Y (NPY) in the Brain
transcription profiling by array
Mus musculus
24
30/08/2017
-
68
-
Transcription profiling by array of porcine peripheral blood with differing poly I:C-induced neutrophil ratio variation
transcription profiling by array
Sus scrofa
12
30/08/2017
-
74
-
Transcriptional response in acute lymphoblastic leukaemia cells to bone marrow microenvironment
transcription profiling by array
Homo sapiens
12
30/08/2017
261
-
Transcriptome analysis of Vibrio vulnificus cells that are either exposed to HT29-methotrexate intestinal epithelial cells or grown in basal medium eagle
RNA-seq of coding RNA
Vibrio vulnificus
12
29/08/2017
-
ENA
90
-
Time course RNA-seq of Mycobacterium tuberculosis exposed to nitric oxide
RNA-seq of coding RNA
Mycobacterium tuberculosis H37Rv
15
29/08/2017
-
ENA
99
-
Transcription profiling array of human glioblastoma cell line U87 comparing control cells with U87-shLIN7a knockdown cells and rescue cells which have the same Lin7a knockdown but re-express Lin7a lentivirally (U87-shLin7a+Lin7A)
transcription profiling by array
Homo sapiens
9
27/08/2017
-
165
-
Transcriptional profiling of THP1-derived human macrophages with different stimuli
transcription profiling by array
Homo sapiens
21
25/08/2017
210
-
Transcriptional profiling of primary human macrophages with different stimuli
transcription profiling by array
Homo sapiens
48
25/08/2017
262
-
Microarray analysis of bone-marrow derived macrophages (BMDMs) stimulated with two different TLR2 agonists, H. hepaticus polysaccharide or Pam3CSK4
transcription profiling by array
Mus musculus
18
25/08/2017
-
82
-
Ablation of casein kinase 1 in keratinocytes induces p53-dependent hyperpigmentation of the skin
RNA-seq of coding RNA
Mus musculus
19
25/08/2017
-
ENA
141
-
RNA-seq of C17.2 neuronal progenitor cells exposed to cerium oxide nanoparticles during cell differentiation
RNA-seq of coding RNA
Mus musculus
39
25/08/2017
ENA
136
-
Effect of Hamamelitannin, vancomycin and combination treatment of Hamamelitannin and vancomycin on gene expression in S. aureus Mu50 biofilms
RNA-seq of coding RNA
Staphylococcus aureus subsp. aureus Mu50
12
25/08/2017
-
ENA
80
-
Sequence Requirements for Cascade Function in a Type I-E CRISPR System: ChIP Library-seq
ChIP-seq
Escherichia coli str. K-12 substr. MG1655
10
24/08/2017
-
ENA
82
-
Sequence Requirements for Cascade Function in a Type I-E CRISPR System: RNA-Seq
RNA-seq of coding RNA
Escherichia coli str. K-12 substr. MG1655
4
24/08/2017
-
ENA
96
-
Sequence Requirements for Cascade Function in a Type I-E CRISPR System: ChIP-Seq
ChIP-seq
Escherichia coli str. K-12 substr. MG1655
16
24/08/2017
-
ENA
75
-
Sequence Requirements for Cascade Function in a Type I-E CRISPR System: Plasmid Loss
DNA-seq
Escherichia coli str. K-12 substr. MG1655
6
24/08/2017
-
ENA
83
-
Role of RccR in the transcriptional control of primary carbon metabolism in Pseudomonas
ChIP-seq
Pseudomonas fluorescens
8
24/08/2017
ENA
78
-
Ribosome profiling of Pseudomonas fluorescens SBW25 and its hfq deletion mutant
RNA-seq of coding RNA
Pseudomonas fluorescens
4
24/08/2017
ENA
76
-
Analysis of the Hfq regulon in Pseudomonas fluorescens SBW25
RNA-seq of coding RNA
Pseudomonas fluorescens
4
24/08/2017
ENA
96
-
Rna-seq of control and 2mM NaBu-treated zebrafish larvae (8 dpf)
RNA-seq of coding RNA
Danio rerio
6
23/08/2017
ENA
76
-
Gene expression patterns in 34 decidua samples of women in term and preterm labour
transcription profiling by array
Homo sapiens
36
23/08/2017
-
102
-
RNA-seq of starfish ( Astropecten Aranciacus ) eggs and early embyos from the Gulf of Naples, Italy, to study the molecular mechanisms of meiotic maturation and the cell cycle
RNA-seq of coding RNA
Astropecten aranciacus
13
22/08/2017
-
ENA
117
-
Genome-wide SNP signal intensity scanning to find genes differentiating cows with ovarian pathologies from healthy cows
genotyping by array
Bos taurus
12
22/08/2017
98
-
Diel changes of transcriptome in cold-treated maize
transcription profiling by array
Zea mays
56
21/08/2017
167
-
MicroRNA expression profile of non-Hodgkin B-cell lymphomas, reactive lymph nodes, pure B and T cell, lymphoblastoid cell lines and mononucleosis
microRNA profiling by array
Homo sapiens
158
20/08/2017
-
291
-
Expression profiling of Jurkat cells infected with HIV-1 and treated with digoxin or DMSO
RNA-seq of coding RNA
Homo sapiens
6
19/08/2017
-
ENA
138
Transcription profiling by microarray of 18 micro-dissected Human kidney tubule tissue samples
transcription profiling by array
Homo sapiens
18
19/08/2017
-
106
-
Gene expression in sRNA deletion mutant Burkholderia cenocepacia J2315 delta ncS35
RNA-seq of coding RNA
Burkholderia cenocepacia
18
19/08/2017
-
ENA
72
-
miRNA array of 5 plasma with recurrent stage II gastric cancer against 5 plasma non-recurrent stage III gastric cancer in humans
microRNA profiling by array
Homo sapiens
10
18/08/2017
-
158
-
Transcription profiling by array of the frontal cortices of embryonic UspX knock out mice
transcription profiling by array
Mus musculus
16
18/08/2017
77
-
Transcriptomic profiling of the brains of WNV and CHIKV infection-induced encephalitis in young mice after 2, 3 or 5 days post infection
transcription profiling by array
Mus musculus
29
17/08/2017
-
140
-
MicroRNA profiling of different TUT4 and TUT7 deficient mouse tissues/cells against controls
microRNA profiling by high throughput sequencing
Mus musculus
21
17/08/2017
-
ENA
85
-
Array profiling of different TUT4 and TUT7 deficient mouse tissues/cells against controls
transcription profiling by array
Mus musculus
32
17/08/2017
-
139
-
Transcription profiling of Arabidopsis thaliana wild-type plants under a high salinity stress condition
transcription profiling by array
Arabidopsis thaliana
4
17/08/2017
-
144
-
Transcription profiling of the Arabidopsis thaliana srk2abgh quadruple mutant under a high salinity stress condition
transcription profiling by array
Arabidopsis thaliana
4
17/08/2017
-
104
-
A Liver Capsular Network of Monocyte-Derived Macrophages Restricts Hepatic Dissemination of Intraperitoneal Bacteria by Neutrophil Recruitment
transcription profiling by array
Mus musculus
7
16/08/2017
-
110
-
Transcription profiling by array of a novel prostate progenitor cell (LSCmed) in mouse in contrast to prostate luminal and basal stem cells
transcription profiling by array
Mus musculus
9
15/08/2017
-
119
-
Transcription profiling by array of SPEN-expressing and control T47D cells grown in the presence or absence of hormones (Estradiol or Tamoxifen)
transcription profiling by array
Homo sapiens
18
15/08/2017
-
155
-
Transcription profiling by array of MCF-10A cells transfected with Split Ends (SPEN)-silencing or control siRNA
transcription profiling by array
Homo sapiens
6
15/08/2017
-
82
-
Transcription profiling by array of naive CD4+ T cell populations defined by CD25 and CD31 expression
transcription profiling by array
Homo sapiens
90
15/08/2017
-
140
-
Transcription profiling by array of CD20-positive B cells from healthy individuals
transcription profiling by array
Homo sapiens
12
15/08/2017
-
100
-
Transcription profiling by nanostring of human CD4 T cell subsets stratified by complement receptor type 2 (CR2) expression
transcription profiling by array
Homo sapiens
24
15/08/2017
61
-
RNA-seq analysis of transport deficient S. pneumoniae TIGR4 mutants
RNA-seq of coding RNA
Streptococcus pneumoniae
8
14/08/2017
ENA
95
-
Microarray of non-polarized and M1- and M2-polarized canine macrophages in vitro
transcription profiling by array
Canis lupus familiaris
18
10/08/2017
116
-
Transcriptomics during the differentiation of human pluripotent stem cells to hepatocyte-like cells
transcription profiling by array
Homo sapiens
62
09/08/2017
139
-
RNA-seq of whole lungs from Irgm1-/- and wildtype littermates mice that were either uninfected or infected with influenza for 3, 6, or 10 days
RNA-seq of coding RNA
Mus musculus
48
08/08/2017
ENA
160
-
Gene expression profiling in patients with polymyalgia rheumatica before and after symptom abolishing glucocorticoid treatment
transcription profiling by array
Homo sapiens
36
08/08/2017
-
144
-
RNA-seq of chemically reset human naive pluripotent stem cells
RNA-seq of coding RNA
Homo sapiens
30
07/08/2017
-
ENA
150
-
RNA sequencing of T. brucei EATRO1125 expressing RBP10
RNA-seq of coding RNA
Trypanosoma brucei
8
07/08/2017
-
ENA
78
-
Role assessment of the type VI secretion systems during disease interactions of Erwinia amylovora with its plant host by comparing the in planta and in vitro RNA-seq transcriptomes of wildtype CFBP 1430 and its T6SS double mutant (T6-d1d3)
RNA-seq of coding RNA
Erwinia amylovora
4
07/08/2017
-
ENA
86
-
RNA-seq analysis of wild type Columbia seedlings
RNA-seq of coding RNA
Arabidopsis thaliana
3
07/08/2017
-
ENA
123
-
RNAseq analysis of wild type dark grown PSB-D cell cultures
RNA-seq of coding RNA
Arabidopsis thaliana
3
07/08/2017
-
ENA
78
-
Identification of gene expression signature for cigarette smoke exposure response--from man to mouse
transcription profiling by array
Homo sapiens
302
05/08/2017
270
-
Identification of gene expression signature for cigarette smoke exposure response--from man to mouse
transcription profiling by array
Homo sapiens
302
05/08/2017
252
-
COPD progression in C57l/6 mice in response to chronic exposure (up to 7 months) to conventional cigarette smoke or a prototype modified risk tobacco product (pMRTP) and the impact of cessation or switching to pMRTP after initial exposure to conventional cigarette smoke
transcription profiling by array
Mus musculus
194
05/08/2017
217
-
An 8-Month Systems Toxicology Inhalation/Cessation Study in Apoe-/- Mice to Investigate Cardiovascular and Respiratory Exposure Effects of a Candidate Modified Risk Tobacco Product, THS 2.2, Compared With Conventional Cigarettes
transcription profiling by array
Mus musculus
54
05/08/2017
123
-
Transcription profiling of blood from smokers, non-smokers and former smokers to identify gene expression signature for cigarette smoke exposure response
transcription profiling by array
Homo sapiens
89
05/08/2017
153
-
Transcription profiling of blood from smokers (with or without COPD), non-smokers and former smokers to identify gene expression signature for cigarette smoke exposure response
transcription profiling by array
Homo sapiens
233
05/08/2017
352
-
Transcriptional response of LPS-stimulated monocyte-derived macrophages in the presence or absence of the anti-TNF agonist Etanercept
transcription profiling by array
Homo sapiens
18
04/08/2017
158
-
Whole blood transcriptional profiling of healthy volunteers and rheumatoid arthritis patients treated with methotrexate or anti-TNF therapy after ex vivo whole blood stimulation with TNF
transcription profiling by array
Homo sapiens
16
04/08/2017
223
-
Transcriptional profiling of the tuberculin skin test in healthy volunteers and in rheumatoid arthritis patients treated with methotrexate or anti-TNF therapy
transcription profiling by array
Homo sapiens
25
04/08/2017
146
-
Genome variation and conserved regulation identify genomic regions responsible for strain specific phenotypes of metabolic syndrome in rats
RNA-seq of coding RNA
Rattus norvegicus
20
03/08/2017
ENA
123
-
Identification of high-affinity microRNA targets
RIP-seq
Mus musculus
26
03/08/2017
ENA
98
-
RNA-seq analysis of C. elegans CPEB homolog mutants
RNA-seq of coding RNA
Caenorhabditis elegans
27
03/08/2017
-
ENA
106
-
iCLIP analysis of RNA binding sites of Stau2 protein in mouse brain cells
CLIP-seq
Mus musculus
6
02/08/2017
-
ENA
97
-
RNAseq of primary human gallbladder cells, reprogrammed human gallbladder cells, and human pancreatic beta cells
RNA-seq of coding RNA
Homo sapiens
18
02/08/2017
ENA
114
-
microRNAseq of primary human gallbladder cells, reprogrammed human gallbladder cells, and human pancreatic beta cells
microRNA profiling by high throughput sequencing
Homo sapiens
4
02/08/2017
ENA
80
-
Strategies for in vivo screening and mitigation of hepatotoxicity associated with antisense drugs
RNA-seq of coding RNA
Mus musculus
79
02/08/2017
-
ENA
162
-
RNA-Seq of bacteriophage S-PM2d infecting Synechococcus spp. WH7803 at high light and low light treatments
RNA-seq of coding RNA
Synechococcus phage S-PM2
6
01/08/2017
-
ENA
57
-
RNA-seq of human tissues
RNA-seq of coding RNA
Homo sapiens
14
01/08/2017
-
ENA
203
-
RNA-seq of HEK293T cell line
RNA-seq of coding RNA
Homo sapiens
136
01/08/2017
-
ENA
308
-
Targeted sequencing of 86 regulatory elements and 12 breast cancer genes
DNA-seq
Homo sapiens
290
01/08/2017
-
ENA
412
-
ATAC-seq of HEK293T cell line
ATAC-seq
Homo sapiens
14
01/08/2017
-
ENA
185
-
Mutant Cd36 and Wars2 genes affect mass and function of brown adipose tissue in spontaneously hypertensive rats
transcription profiling by array
Rattus norvegicus
128
01/08/2017
-
90
-
Dual RNA-seq of M. tuberculosis H37Rv infecting macrophage-like THP-1 cells during 48h
RNA-seq of coding RNA
Homo sapiens, Mycobacterium tuberculosis H37Rv
42
01/08/2017
-
ENA
260
-
Methylation profiling of end-stage renal disease patients and healthy controls
methylation profiling by array
Homo sapiens
144
01/08/2017
-
148
-
Global mRNA transcriptome analysis of wild type and Hfq mutant strains of Serratia marcescens by RNAseq
RNA-seq of coding RNA
Serratia marcescens
8
01/08/2017
-
ENA
56
-
Comparison of gene expression profiling among high-grade ovarian epithelial cancer, ovarian epithelium and fallopian tube
transcription profiling by array
Homo sapiens
12
01/08/2017
-
139
-
Cross-tissue transcriptomic analysis of human secondary lymphoid organ residing ILC3 reveals a default quiescent state in the absence of inflammation
RNA-seq of coding RNA
Homo sapiens
20
31/07/2017
-
75
-
RNA-seq analysis of date-palms treated with stress hormone ABA compared to controls
RNA-seq of coding RNA
Phoenix dactylifera
8
31/07/2017
-
ENA
111
-
RNAseq of circulating neutrophils in peripartal grazing dairy cows divergent in metabolic health
RNA-seq of coding RNA
Bos taurus
120
30/07/2017
-
ENA
156
-
Transcriptional profiling by array of mouse hearts from animals with heterozygous truncation of Igf1 gene (HZ), or HZ treated with low doses of IGF-1 (substitutive therapy) against wild-type control
transcription profiling by array
Mus musculus
3
30/07/2017
-
61
-
Global Expression profiling of mutant mouse lineage negative progenitors
transcription profiling by array
Mus musculus
10
30/07/2017
-
72
-
Global Expression profiling of mutant mouse lineage negative progenitors
transcription profiling by array
Mus musculus
33
30/07/2017
-
98
-
Global Expression profiling of mutant mouse multipotent progenitors
transcription profiling by array
Mus musculus
28
30/07/2017
-
117
-
Array Comparative Hybridisation of Acute Myeloid Leukemia's generated from mouse models of Npm1cA/+, compound Npm1cA/+; NrasG12D/+ and Npm1cA/+;Flt3ITD/+ myeloid leukemia
comparative genomic hybridization by array
Mus musculus
25
30/07/2017
-
167
-
Effect of a KRAS peptide nucleic acid clamp on the Ion Torrent sequencing protocol
DNA-seq
Homo sapiens
36
29/07/2017
ENA
131
-
RNA-seq analyses of most resistance Indica Rice varieties (Oryza sativa L.) leaves tissue under water-deficit condition
RNA-seq of coding RNA
Oryza sativa Indica Group
4
27/07/2017
-
ENA
85
-
Transcription profiling by microarray of lncRNA affected by EGF stimulation of MCF10A cells
transcription profiling by array
Homo sapiens
15
27/07/2017
138
-
Genes affected by manipulation of LIMT, a novel metastasis inhibiting lncRNA is suppressed by EGF and down-regulated in aggressive breast cancer
transcription profiling by array
Homo sapiens
12
27/07/2017
134
-
Microarray analysis of the effect of ppGpp, cdiAMP, and cdiGMP on Saccharomyces cerevisiae
transcription profiling by array
Saccharomyces cerevisiae
24
26/07/2017
83
-
RNA-seq of coding RNA from DDX6 knockout human haploid (HAP1) cells
RNA-seq of coding RNA
Homo sapiens
8
25/07/2017
ENA
159
-
Haploid genome-wide screens for essential components and negative regulators of interferon lambda signaling in human cells
DNA-seq
Homo sapiens
3
25/07/2017
-
ENA
125
-
RNA-seq of coding RNA from USP14 knockout human haploid (HAP1) cells
RNA-seq of coding RNA
Homo sapiens
8
25/07/2017
ENA
119
-
Analysis of mitochondrial gene expression with Ribosome Profiling
RNA-seq of coding RNA
Homo sapiens
3
25/07/2017
-
ENA
108
-
Cytogenetics 2.7M and Cytoscan HD 2.8M Microarrays in autistic families in the Lebanese population
comparative genomic hybridization by array
Homo sapiens
142
24/07/2017
-
160
-
RNA localization is a key determinant of neurite-enriched proteome - Riboseq
translation profiling
Mus musculus
6
23/07/2017
-
ENA
101
-
RNA localization is a key determinant of neurite-enriched proteome - RNAseq
RNA-seq of coding RNA
Mus musculus
6
23/07/2017
-
ENA
135
-
Whole transcriptome profiling of Esophageal adenocarcinoma and Barrett's
RNA-seq of coding RNA
Homo sapiens
63
23/07/2017
-
ENA
267
Transcriptome profiling by microarray of Caenorhabditis elegans MT2124 x CB4856 RILs used for eQTL mapping
transcription profiling by array
Caenorhabditis elegans
24
21/07/2017
-
117
-
RNA-seq of different Plodia interpunctella tissues for males and females
RNA-seq of coding RNA
Plodia interpunctella
16
19/07/2017
-
ENA
129
-
RNA-seq experiment of Drosophila melanogaster larvae reared on Aspergillus nidulans infested breeding substrate
RNA-seq of coding RNA
Drosophila melanogaster
131
19/07/2017
-
ENA
132
-
Transcription profiling by array of rice cell line N1 treated with herbicide safener fenclorim and its analogue CMP
transcription profiling by array
Oryza sativa Japonica Group
18
18/07/2017
-
101
-
mRNA time-course transcription profiling of bacteriocytes and gut tissue of pea aphids reared on standard artificial diet (AP3) and artificial diet depleted in Tyr and Phe (YFØ)
transcription profiling by array
Acyrthosiphon pisum
66
18/07/2017
-
116
-
RNA-seq of HEK293T cells treated with control b-globin siRNA and Pat1b siRNA
RNA-seq of coding RNA
Homo sapiens
8
17/07/2017
-
ENA
161
-
Glucocorticoid receptor ChIP-seq in an immortalized podocyte cell line
ChIP-seq
Homo sapiens
2
17/07/2017
ENA
104
-
Glucocorticoid therapy regulates podocyte motility by inhibition of Rac1
transcription profiling by array
Homo sapiens
6
17/07/2017
92
-
RNA-seq for splenic gene expression in response to Newcastle disease virus challenge in two chicken lines with different disease resistance
RNA-seq of coding RNA
Gallus gallus
31
16/07/2017
-
ENA
122
-
RNA-seq of different Bombyx mori tissues for males and females
RNA-seq of coding RNA
Bombyx mori
12
16/07/2017
-
ENA
72
-
Determination of mRNA half-lives in embryonic mouse skin
RNA-seq of coding RNA
Mus musculus
12
14/07/2017
-
ENA
143
-
Chipseq on Sox18Ragged-mCherry over-expressed zebrafish larvae at 26-28hpf
ChIP-seq
Danio rerio
2
13/07/2017
ENA
76
-
Whole genome expression changes in Candida albicans due to a mutation in transcription factor Grf10
transcription profiling by array
Candida albicans
3
12/07/2017
-
69
-
MicroRNA profiling by arrray of unilaterial and bilateral retinoblastoma tumours from enucleated patients with no chemotherapy history
microRNA profiling by array
Homo sapiens
12
11/07/2017
146
-
Global gene regulation during immunoglobulin class switching in human activated B cells
transcription profiling by array
Homo sapiens
18
11/07/2017
-
91
-
Transcription profiling of paw skin from young and old mice to study the effect of ageing in interfollicular epidermis
transcription profiling by array
Mus musculus
8
11/07/2017
-
99
-
A UNIQUE ENHANCER BOUNDARY COMPLEX DEFINES THE STABLE POISED STATE OF THE MOUSE RIBOSOMAL RNA GENES IN THE ABSENCE OF RRN3, UBF AND RNA POLYMERASE I TRANSCRIPTION
ChIP-seq, DNA-seq
Mus musculus
78
08/07/2017
ENA
215
-
Transcription profiling of oesophageal adenocarcinoma by RNA-seq
RNA-seq of coding RNA
Homo sapiens
6
07/07/2017
-
ENA
141
-
ATAC-seq of oesophageal cell lines and tissue samples
ATAC-seq, DNA-seq
Homo sapiens
11
07/07/2017
ENA
123
-
ETV1 ChIP-seq in OE33 esophageal adenocarcinoma cells
ChIP-seq
Homo sapiens
3
07/07/2017
ENA
132
-
Transcription profiling of oesophageal adenocarcinoma
transcription profiling by array
Homo sapiens
14
07/07/2017
-
171
-
Signatures of inflammation and impending multiple organ dysfunction in the hyperacute phase of trauma: A prospective cohort study
transcription profiling by array
Homo sapiens
118
06/07/2017
306
-
Transcription profiling by array of single and double deletion mutants involved in ribosome assembly
transcription profiling by array
Saccharomyces cerevisiae
22
06/07/2017
113
-
Transcription profiling by array of 60 deletion mutants involved in ribosome assembly
transcription profiling by array
Saccharomyces cerevisiae
107
06/07/2017
186
-
Microarray comparing gene expression changes between control, normoglycaemic mice, and mice expressing the human neonatal diabetes mutation Kir6.2-V59M in pancreatic beta-cells left diabetic for 2 weeks
transcription profiling by array
Mus musculus
8
05/07/2017
-
117
-
Gene expression profiling of biphenotypic acute leukemia
transcription profiling by array
Homo sapiens
12
05/07/2017
-
230
-
Transcription profiling of human glioblastoma cells with EGFR amplification grown in rat xenograft model
transcription profiling by array
Homo sapiens
6
05/07/2017
-
176
-
Transcription profiling by high throughput sequencing of CD8 single positive thymocytes from F5 Rag1KO TCR transgenic mice stimulated with tumor necrosis factor
RNA-seq of coding RNA
Mus musculus
11
05/07/2017
ENA
83
-
Gene expression of IKK1/2 deficient thymocytes
RNA-seq of coding RNA
Mus musculus
7
05/07/2017
ENA
80
-
Acquired TET2 mutation-linked clonal hematopoiesis in FPD/AML patient led to the development of pre-leukemic clone resulting independently in T2-ALL and AML-M0
DNA-seq
Homo sapiens
3
05/07/2017
-
ENA
139
-
Transcription profiling by array of Bacillus amyloliquefaciens FZB42 wildtype and sigD-mutants grown in media supplemented with soil extract or soil extract plus maize root exudates
transcription profiling by array
Bacillus amyloliquefaciens
9
05/07/2017
85
-
Transcription profiling by array of hepatocellular carcinoma cell lines following treatment with STAT3 shRNA and IL-6, IL-27 or IFN-gamma
transcription profiling by array
Homo sapiens
48
05/07/2017
-
223
-
Transcription profiling by array of a human embryonic kidney cell line (HEK-293) expressing mutant or wild type KIT following treatment with stem cell factor
transcription profiling by array
Homo sapiens
18
05/07/2017
-
84
-
microRNA profiling by array of human Autosomal Dominant Polycystic Kidney Disease kidney epithelial cell lines
microRNA profiling by array
Homo sapiens
6
05/07/2017
-
102
-
Gene expression profiling in human ADPKD cell lines
transcription profiling by array
Homo sapiens
6
05/07/2017
-
94
-
Transcriptome analysis of Arabidopsis expressing the transcription factor INDEHISCENT under the control of the 35S promoter after treatment with auxin
transcription profiling by array
Arabidopsis thaliana
12
05/07/2017
104
-
Transcriptome profiling after CBX7 knockdown in LNCaP cells
transcription profiling by array
Homo sapiens
12
05/07/2017
-
136
-
Long non-coding RNA expression profiling of human T cells in hepatocellular carcinoma
transcription profiling by array
Homo sapiens
9
05/07/2017
-
147
-
Transcriptome analysis in the Antarctic bacterium Pseudomonas extremaustralis at low temperatures
RNA-seq of coding RNA
Pseudomonas extremaustralis 14-3 substr. 14-3b
4
05/07/2017
-
ENA
66
-
Differences of gut mucosa gene expression between septic very low birth weight infants and their non-septic twins
transcription profiling by array
Homo sapiens
10
05/07/2017
-
121
-
Transcription profiling by array of E. faecalis V583 LexA- and wild type to investigate constitutive SOS response
transcription profiling by array
Enterococcus faecalis
2
05/07/2017
62
-
Transcription profiling of human breast cancer and scarcoma tissue and adjacent tissue to investigate alterantive splicing
transcription profiling by array
Homo sapiens
40
05/07/2017
267
-
Transcriptional differences between the peripheral and the transcription zone of the prostate
RNA-seq of coding RNA
Homo sapiens
18
04/07/2017
-
ENA
220
-
RNA-seq analysis of 2 cell line models of lung disease (A549 and BEAS-2B) and primary bronchial epithelial cells in Project 3 of Open Targets 020 - Epigenomes of Cell Lines
RNA-seq of coding RNA
Homo sapiens
7
04/07/2017
-
ENA
501
Transcription profiling by array of human extrahepatic cholangiocyte organoids, freshly isolated common bile duct cholangiocytes and embryonic stem cells
transcription profiling by array
Homo sapiens
15
04/07/2017
133
-
Analysis of transcriptomes from 21 tissues, 13 melanoma samples and 7 breast cancer cell lines, enriched for transcripts from haploblocks with intronic and intergenic GWAS SNPs
RNA-seq of coding RNA
Homo sapiens
41
04/07/2017
-
ENA
520
-
Transcription profiling by array of the differences between matched male and female breast cancer
transcription profiling by array
Homo sapiens
25
04/07/2017
-
197
-
Sphingobium Nickel resistance analysis by RNA-seq approach
RNA-seq of coding RNA
Sphingobium sp. ba1
6
03/07/2017
ENA
63
-
Gene expression between dry and imbibed seeds in vitamin C defective (vtc) mutants and wild-type Arabidopsis thaliana
RNA-seq of coding RNA
Arabidopsis thaliana
18
03/07/2017
ENA
70
-
Time of day determines Arabidopsis transcriptome and growth dynamics under mild drought
RNA-seq of coding RNA
Arabidopsis thaliana
21
03/07/2017
ENA
93
-
Transcription profiling by array of South Australian bread wheat under salt stress
transcription profiling by array
Triticum aestivum
84
02/07/2017
-
169
-
Transcription profiling by array of human hematopoietic stem cell isolated from multiple sclerosis patients and healthy controls
transcription profiling by array
Homo sapiens
8
02/07/2017
-
117
-
RNA-seq of Japonica rice with overexpression or knockdown of OsMPH1 gene, which is involved in regulation of plant height --- a major trait affecting yield potential
RNA-seq of coding RNA
Oryza sativa Japonica Group
9
01/07/2017
-
ENA
67
-
RNA-seq of Brachypodium distachyon culms from control and BdBAHD01 RNAi plants
RNA-seq of coding RNA
Brachypodium distachyon
12
01/07/2017
-
ENA
67
-
RNA-seq of Setaria viridis culms from control and SvBAHD01 RNAi plants
RNA-seq of coding RNA
Setaria viridis
9
01/07/2017
-
ENA
66
-
Gene expression analysis of lung cancer samples and healthy controls
transcription profiling by array
Homo sapiens
40
01/07/2017
-
411
-
Transcriptome profiling of human anaplastic meningioma IOMM-Lee cells following silencing of HuR (Human antigen R) gene expression by siRNA
transcription profiling by array
Homo sapiens
12
01/07/2017
-
57
-
Small RNA and total RNA sequencing of C. elegans with mutations in the hrde-1 and emb-4 genes
RNA-seq of non coding RNA
Caenorhabditis elegans
40
01/07/2017
-
ENA
107
-
Transcription profiling by high throughput sequencing of murine small intestinal epithelial cells stimulated with interleukin-28A
RNA-seq of coding RNA
Mus musculus
8
01/07/2017
-
ENA
136
-
Transcription profiling by array of human osteosarcoma cell line U2OS treated with ZM447439 (an aurora kinase inhibitor) or SB202190 (a p38 inhibitor)
transcription profiling by array
Homo_sapiens
4
01/07/2017
123
-
Time-course of bone marrow macrophages infected with Listeria monocytogenes in the presence or absence of IFNgamma
transcription profiling by array
Mus musculus
40
30/06/2017
-
123
-
Comparative microarrays of Actinoplanes sp. SE50/110 ΔacrA with the Actinoplanes sp. SE50/110 wildtype
transcription profiling by array
Actinoplanes sp. SE50/110
4
30/06/2017
-
60
-
RNAseq analysis of CD4 and CD8 T cells in response to vaccinia virus infection
RNA-seq of coding RNA
Mus musculus
12
30/06/2017
ENA
101
-
Transcriptional profiling of human breast tumor samples before and after treatment with chemotherapy with and without bevacizumab
transcription profiling by array
Homo sapiens
358
30/06/2017
432
-
Transcription profiling of human multiple myeloma cells after knockdown of EphA3
transcription profiling by array
Homo sapiens
4
30/06/2017
417
-
Transcription profiling by array of MCF7 cell lines silenced with TRAP1 small interfering RNA compared with scrambled RNA control
transcription profiling by array
Homo sapiens
6
30/06/2017
129
-
Expression profile of microRNAs in human follicular lymphoma (FL), reactive lymph nodes (rLN) and pure T cells
microRNA profiling by array
Homo sapiens
42
29/06/2017
-
195
-
ChIP-Seq of Gabpa in male C57Bl/6 mice liver
ChIP-seq
Mus musculus
5
29/06/2017
-
ENA
77
-
Histone H3K9me3 ChIP-seq of young adult C. elegans wildtype, and mutants emb-4 (qm31) and hrde-1 (tm1200)
ChIP-seq
Caenorhabditis elegans
20
29/06/2017
-
ENA
67
-
RNA-seq of wild-type Salmonella Typhimurium SL1344 and its AcrB D408A mutant
RNA-seq of coding RNA
Salmonella enterica subsp. enterica serovar Typhimurium str. SL1344
6
29/06/2017
ENA
69
-
Analysis of post-transcriptional RNA modifications in Caenorhabditis elegans under stress
RNA-seq of non coding RNA
Caenorhabditis elegans
9
29/06/2017
-
ENA
64
-
Acquired TET2 mutation-linked clonal hematopoiesis in FPD/AML patient led to the development of pre-leukemic clone resulting independently in T2-ALL and AML-M0
comparative genomic hybridization by array
Homo sapiens
2
29/06/2017
-
109
-
Transcriptome profiling of glioblastoma tissues and peritumoral regions by Serial Analysis of Gene Expression
transcription profiling by SAGE
Homo sapiens
27
29/06/2017
-
ENA
195
-
Finding new Chimeric RNAs in RNA-seq data, a test study in Acute Myeloid Leukemia patient cells
RNA-seq of coding RNA
Homo sapiens
3
28/06/2017
-
ENA
193
-
Transcription profiling by array of left ventricular papillary muscles from rats with diabetic cardiomyopathy and healthy controls treated with atorvastatin or vehicle control for 15 days
transcription profiling by array
Rattus norvegicus
12
27/06/2017
-
69
-
Transcription changes at sub-optimal root temperature in different grafting combinations of tomato rootstocks and scions
transcription profiling by array
Solanum habrochaites, Solanum lycopersicum
24
27/06/2017
-
67
-
Methylome profiling of human glioblastoma using Illumina 450K microarrays for the GlioTeX panel
methylation profiling by array
Homo sapiens
10
24/06/2017
-
157
-
Transcription profiling by array of mouse primary myoblasts constitutively expressing Hippo pathway downstream effectors Yap or Taz against empty vector controls
transcription profiling by array
Mus musculus
18
20/06/2017
118
-
Transcription profiling by array of Bacillus amyloliquefaciens FZB42 wildtype and sigD- mutants grown in media supplemented with soil extract
transcription profiling by array
Bacillus amyloliquefaciens
6
20/06/2017
81
-
Microarray analysis of abiotic stress responses in Arabidopsis thaliana rosette leaf tissue of Col-0 wild type plants and double/triple knockout mutants of aquaporins (pip2;1 pip2;2 and pip2;1 pip2;2 pip2;4)
transcription profiling by array
Arabidopsis thaliana
135
20/06/2017
234
-
Transcriptional profiling by array of chronic myeloid leukaemia (CML) stem/progenitor cells (CD34+38-) treated with tyrosine kinase inhibitors (imatinib, dasatinib and nilotinib) at different time points (8 hours and 7 days) against untreated controls
transcription profiling by array
Homo sapiens
49
20/06/2017
-
248
-
Transcriptional profiling of the developmental gene whiH deletion mutant of Streptomyces venezuelae ATCC 10712 at 7 time points from 8 to 20 hours of growth
transcription profiling by array
Streptomyces venezuelae
42
19/06/2017
122
-
RNA-seq of Hutchinson-Gilford progeria syndrome cells treated with proteasome inhibitor MG132
RNA-seq of coding RNA
Homo sapiens
2
18/06/2017
-
ENA
148
-
AtPRMT5 regulates shoot regeneration through modulating multiple genes expression analyzed by RNA-seq
RNA-seq of coding RNA
Arabidopsis thaliana
6
18/06/2017
ENA
90
-
Genes induced by HERV-K virus retroviral envelop
transcription profiling by array
Homo sapiens
8
17/06/2017
-
96
-
Expression array of RKO colorectal cancer cells resistant to irinotecan (CPT-11)
transcription profiling by array
Homo sapiens
3
17/06/2017
-
158
-
Microarray transcription analysis of MDS/MPN leukocyte samples with and without EZH2 mutations (n = 12, each) and EZH2-downregulated F-36P, MOLM-13 and OCI-M2 cell lines, using 2 shRNAs targeting EZH2 and a non-targeting control shRNA, each
transcription profiling by array
Homo sapiens
60
15/06/2017
-
251
-
Dynamic regulation of VEGF-inducible genes by an ERK-ERG-p300 transcriptional network
transcription profiling by array
Homo sapiens
14
15/06/2017
-
89
-
ChIP-seq of ERG-bound regulatory elements in human and bovine vascular endothelial cells
ChIP-seq
Bos taurus, Homo sapiens
10
15/06/2017
-
ENA
138
-
Elevated growth temperature in procyclic form of Trypanosoma brucei
RNA-seq of coding RNA
Trypanosoma brucei
6
15/06/2017
-
ENA
52
-
RNA-seq of in vitro-generated murine T helper 17 cells
RNA-seq of coding RNA
Mus musculus
8
14/06/2017
ENA
93
-
Transcription profiling by array of 4T1 murine breast carcinoma cells and derived cell lines resistant to photodynamic therapy induced by novel porphyrin-based photosensitizers and temoporfin
transcription profiling by array
Mus musculus
13
14/06/2017
-
132
-
RNA-seq of ppp1r13l knockdown in neonatal mice cardiomyocytes and lipopolysaccharide stimulation kinetics transcriptome
RNA-seq of coding RNA
Mus musculus
12
13/06/2017
ENA
114
-
RNA-seq of BALB/cJ‐Ppp1r13lwa3/J (wa3) mouse hearts vs BALB/C wildtype mice aged 7 weeks and 12 weeks mice, as well as lipopolysaccharide treatment for 12-week-old mice
RNA-seq of coding RNA
Mus musculus
12
13/06/2017
-
ENA
86
-
Mutations in ACTRT1 and its transcribed non-coding elements lead to aberrant activation of the Hedgehog signaling pathway in inherited and sporadic basal cell carcinomas
transcription profiling by array
Homo sapiens
5
12/06/2017
-
182
-
p63 spatio-temporal control of cleft palate
transcription profiling by array
Mus musculus
8
12/06/2017
88
-
Transcription profiling by RNA-Seq mouse embryos
RNA-seq of coding RNA
Mus musculus
5
12/06/2017
ENA
133
-
Microarray analysis of palatal shelves from wild-type versus p63-null mouse embryos
transcription profiling by array
Mus musculus
6
12/06/2017
95
-
Transcription profiling by array of neonatal and children dermal fibroblasts isolated from cleft lip and adult dermal fibroblasts of breast and face
transcription profiling by array
Homo sapiens
93
11/06/2017
283
-
Transcription profiling by array of reproductive tissues from female Cynomolgus macaques ( Macaca fascicularis ) after systemic vaccination with a modified vaccinia virus Ankara (MVA)-HIVB
transcription profiling by array
Macaca fascicularis
18
09/06/2017
-
78
-
Transcriptome Analysis of Preinvasive and Invasive Early Squamous Carcinoma in Archival Laser Microdissected Samples
transcription profiling by array
Homo sapiens
60
09/06/2017
241
-
ChIP-seq data of Jun target genes and the control in zebrafish embryos
ChIP-seq
Danio rerio
8
08/06/2017
-
ENA
93
-
Global expression profiling time series of early human embryonic stem cell differentiation towards the mesoderm lineage
transcription profiling by array
Homo sapiens
33
08/06/2017
-
185
-
Transcriptome analysis of self-renewing human pancreatic progenitors derived from pluripotent stem cells
RNA-seq of coding RNA
Homo sapiens
9
06/06/2017
-
ENA
159
-
RNA-seq of Medicago truncatula A17 and the ethylene insensitive sickle mutant interacting with the fungal root pathogen, Rhizoctonia solani AG8
RNA-seq of coding RNA
Medicago truncatula
24
06/06/2017
ENA
103
-
EPO-regulated targets in E1, E2, and E3 erythroid progenitors
transcription profiling by array
Mus musculus
20
06/06/2017
105
-
miRNA expression profiles in fresh frozen and formalin-fixed paraffin embedded tonsillar tumors
transcription profiling by RT-PCR
Homo sapiens
30
06/06/2017
-
184
-
RNA-seq of high lipid producing Yarrowia lipolytica during nitrogen or carbon restriction (control strain)
RNA-seq of coding RNA
Yarrowia lipolytica
6
06/06/2017
-
ENA
88
-
Identifying crossover locations in Arabidopsis thaliana CMT3-11 (Col) x CMT3-7 (Ler) F2 and wild type Col x Ler F2 populations using genotyping by sequencing
genotyping by high throughput sequencing
Arabidopsis thaliana
555
05/06/2017
-
ENA
216
-
Nucleosome-depleted DNA transposons act as enhancers of meiotic recombination at Arabidopsis genes (RNA-seq)
RNA-seq of coding RNA
Arabidopsis thaliana
2
05/06/2017
-
ENA
72
-
Meiotic recombination initiation hotspots in Arabidopsis genes and transposons (H3K4m3 ChIP-seq)
ChIP-seq
Arabidopsis thaliana
9
05/06/2017
-
ENA
76
-
Meiotic recombination initiation hotspots in Arabidopsis genes and transposons (MNase-seq)
MNase-seq
Arabidopsis thaliana
3
05/06/2017
-
ENA
86
-
Meiotic recombination initiation hotspots in Arabidopsis genes and transposons (SPO11-1-oligonucleotides-seq)
DNA-seq
Arabidopsis thaliana
10
05/06/2017
-
ENA
89
-
Transcription profiling of dermal fibroblasts subjected to different fluid flow rates
transcription profiling by array
Homo sapiens
9
05/06/2017
-
104
-
Tissue and developmental atlas of Brachypodium distachyon
transcription profiling by array
Brachypodium distachyon
117
03/06/2017
-
125
-
Genome-wide gene expression analysis of MDA-MB-468 human breast cancer cells treated with PLA2G7 shRNA
transcription profiling by array
Homo sapiens
6
02/06/2017
-
166
-
Genome-wide gene expression analysis of MDA-MB-468 human breast cancer cells treated with PLA2G7 siRNA
transcription profiling by array
Homo sapiens
4
02/06/2017
-
134
-
Analysis of cardiovirus and infected host-cell gene expression through RNA sequencing and ribosome profiling
translation profiling, RNA-seq of coding RNA
Mus musculus
20
02/06/2017
-
ENA
124
-
Analysis of undifferentiated hiPSC and differentiation into intermediate mesoderm of cells from patients carrying a heterozygous mutation in the SAMD9 gene
transcription profiling by array
Homo sapiens
10
02/06/2017
-
93
-
Genome-wide analysis of somatic copy number alterations and chromosomal breakages in osteosarcoma
genotyping by array
Homo sapiens
160
02/06/2017
-
330
-
Transcription profiling by high throughput sequencing of pancreatic beta cells from wild type and Abcc8 knockout mice
RNA-seq of coding RNA
Mus musculus
8
02/06/2017
-
ENA
110
-
ATAC-seq on endocardial cells from E12.5 mouse hearts in Tbx20 knockouts and wild type counterparts
ATAC-seq
Mus musculus
4
02/06/2017
ENA
288
-
Deciphering the relationship between polycomb repression and stochastic gene expression from single-cell RNA-seq data
RNA-seq of coding RNA from single cells
Mus musculus
288
01/06/2017
-
ENA
206
-
Microarray analysis of leaves of Arabidopsis thaliana Col-0 plants exposed to volatile pinenes (treatment) or hexane (control)
transcription profiling by array
Arabidopsis thaliana
8
01/06/2017
90
-
Effect of elevated c-di-GMP in Sinorhizobium meliloti
transcription profiling by array
Sinorhizobium meliloti
4
01/06/2017
60
-
Fip1 iCLIP-seq in Hela cells without treatment or treated with negative control anti-sense oligos (ASO) or snoRD50a ASO to study how snoRD50a affects Fip1/RNA interaction in mRNA 3' processing
CLIP-seq
Homo sapiens
6
01/06/2017
-
ENA
65
-
RNA-biotin based pull down assay with polyA site (PAS) RNA substrates in Hela Nuclear Extract followed by RNA-seq to discover trans-acting RNA molecules involved in mRNA 3 processing
RIP-seq
Homo sapiens
4
01/06/2017
-
ENA
64
-
The epigenetic modifier Fam208a is required to maintain epiblast cell potency
transcription profiling by array
Mus musculus
12
01/06/2017
-
144
-
PBMCs from stage IV melanoma patients after vaccination with melanoma-targeted mature dendritic cells (mDCs)
transcription profiling by array
Homo sapiens
142
01/06/2017
249
-
Comparing effects of inhibition of activin receptor type IIB (ActRIIB), myostatin (GDF8) and/or activinA in mouse muscle
RNA-seq of coding RNA
Mus musculus
34
01/06/2017
ENA
121
-
Lipidomic and Metabolic Changes in the P4-type ATPase ATP10D deficient C57BL/6J Wild Type Mice upon Rescue of ATP10D Function
transcription profiling by array
Mus musculus
8
01/06/2017
-
64
-
Transcriptomic responses of three-spined stickleback (Gasterosteus aculeatus) from Aire and Siblyback populations to ethinyl-estradiol, copper and binary mixtures
transcription profiling by array
Gasterosteus aculeatus
120
01/06/2017
-
95
-
Transcriptomic profiles of the acetogen Clostridium ljungdahlii during lithoautotrophic growth with syngas or with H2 and CO2 compared to organoheterotrophic growth with fructose
transcription profiling by array
Clostridium ljungdahlii
12
01/06/2017
77
-
RNA-seq of RNA endocleavage sites after siRNA knock-down of XRN1 or SMG
RNA-seq of coding RNA
Homo sapiens
3
01/06/2017
-
ENA
77
-
RNA-seq of human foetal foreskin fibroblasts 2 (HFFF2) treated with 2ng/ml TGF-beta-1 to induce myofibroblast differentiation or 10Gy gamma irradiation to induce senescence
RNA-seq of coding RNA
Homo sapiens
9
01/06/2017
-
ENA
174
-
Gene Expression Patterns in Potato Roots Associated with Greater Plant Growth at Low Phosphate Concentrations in the Rhizosphere
transcription profiling by array
Solanum tuberosum
24
01/06/2017
-
66
-
MicroRNA analysis during serum starvation of primary Human Foreskin Fibroblast cells
microRNA profiling by array
Homo sapiens
4
01/06/2017
86
-
Transcription profiling by array of human MDA-MB231-luc2 cells treated with TGFbeta2 and ST247
transcription profiling by array
Homo_sapiens
4
01/06/2017
61
-
Transcription profiling of pancreata from Ptf1a-Cre;LSL-KrasG12D and Ptf1a-Cre;LSL-KrasG12D;RelAfl/fl mice
transcription profiling by array
Mus musculus
6
01/06/2017
95
-
Gene expression profiling of liver from C57BLKS/J and db/db 8 mice with an AAV harboring a control or GAbpa-specific miRNA under the LP1 promoter
transcription profiling by array
Mus musculus
24
31/05/2017
-
95
An oil containing EPA and DHA from transgenic Camelina sativa to replace marine fish oil in feeds for Atlantic salmon (Salmo salar L.)
transcription profiling by array
Salmo salar
36
31/05/2017
-
100
-
Assessing the reliability of spike-in normalization for analyses of single-cell RNA sequencing data
RNA-seq of coding RNA from single cells
Mus musculus
384
31/05/2017
ENA
142
-
Microarray examination of liver tissue from mice fed 58% saturated high fat diet to induce hepatic steatosis
transcription profiling by array
Mus musculus
12
31/05/2017
-
79
-
polyA site sequencing (PAS-seq) analysis of Hela cells treated with NC ASO or snoRD50a ASOs
RNA-seq of coding RNA
Homo sapiens
6
31/05/2017
-
ENA
71
-
RNA-seq of human cell line HeLa after depletion of a lncRNA with three different loss-of-function methods
RNA-seq of coding RNA
Homo sapiens
768
31/05/2017
ENA
184
-
Multiomics of tomato glandular trichomes reveals distinct features of central carbon metabolism supporting high productivity of specialized metabolites
transcription profiling by array
Solanum habrochaites, Solanum lycopersicum
12
31/05/2017
74
-
Cymodocea nodosa response to simulated CO2-driven ocean acidification
RNA-seq of coding RNA
Cymodocea nodosa
9
31/05/2017
ENA
56
-
Transcriptome profiling of contrasting rice genotypes in response to submergence during seed germination
RNA-seq of coding RNA
Oryza sativa
12
31/05/2017
-
ENA
150
-
Gene expression profiling in control, heat-shock, and recovery treatment in a RIL population of Caenorhabditis elegans L4 larvae
transcription profiling by array
Caenorhabditis elegans
84
30/05/2017
-
197
-
Transcriptome analysis of neuromuscular junction during degeneration and regeneration of axon terminal
RNA-seq of coding RNA
Mus musculus
12
30/05/2017
-
ENA
122
-
Transcription profiling by array of eight pairs of closely related strains using pair-wise two-colour microarray analysis
transcription profiling by array
Schizosaccharomyces pombe
8
30/05/2017
-
93
-
Transcriptomic response of tomato (Solanum lycopersicum) plants to ammonium toxicity at elevated CO2 conditions
transcription profiling by array
Solanum lycopersicum
12
29/05/2017
96
-
Transcriptional profiling by array of uropathogenic Escherichia coli (UPEC) strain grown in urine/Luria bertani medium culture in vitro as well as during three distinct phases of UPEC bladder infection
transcription profiling by array
Escherichia coli UTI89
15
28/05/2017
-
75
-
Microarray comparing maternal peripheral blood effector T cells to decidual effector T cells
transcription profiling by array
Homo sapiens
24
26/05/2017
-
136
-
Insights into the prevalence and underlying causes of clonal variation through transcriptomic analysis in Pichia pastoris
transcription profiling by array
Komagataella pastoris
30
26/05/2017
-
96
-
RNA-seq of E10.5 limb mesenchymal cells from mice with mutations in Mycn and mir17-92
RNA-seq of coding RNA
Mus musculus
12
24/05/2017
-
ENA
109
Physcomitrella patens Reute development
transcription profiling by array
Physcomitrella patens
10
24/05/2017
-
93
-
Maternal folate depletion during early development and high fat feeding from weaning elicit similar changes in gene expression, but not in DNA methylation, in adult offspring (DNA methylation data)
methylation profiling by array
Mus musculus
48
22/05/2017
96
-
Maternal folate depletion during early development and high fat feeding from weaning elicit similar changes in gene expression, but not in DNA methylation, in adult offspring (Gene expression data)
transcription profiling by array
Mus musculus
24
22/05/2017
65
-
Identification of ETO2-GLIS2 targets by ChIP-sequencing
ChIP-seq
Homo sapiens
27
22/05/2017
-
ENA
194
-
Temporal Transcriptional Profiling in response to cMYC and Her2/NEU Expression and Inactivation in In Vitro Cultured Primary Mammary Epithelial Cells of Adult Virgin Mice
transcription profiling by array
Mus musculus
9
22/05/2017
-
154
-
Temporal Transcriptional Profiling in response to cMYC and KrasG12D Expression and Inactivation in In Vitro Cultured Primary Mammary Epithelial Cells of Adult Virgin Mice
transcription profiling by array
Mus musculus
9
22/05/2017
-
173
-
RNAseq of Volvox carteri somatic cells and mature reproductive cells
RNA-seq of coding RNA
Volvox carteri
6
21/05/2017
-
ENA
101
-
Transcriptomes and differential gene expression at the Arabidopsis shoot meristem during flowering
RNA-seq of coding RNA
Arabidopsis thaliana
16
21/05/2017
-
ENA
305
Chromatin states in the Arabidopsis shoot apical meristem
ChIP-seq
Arabidopsis thaliana
24
21/05/2017
-
ENA
142
-
Chromatin states in the Arabidopsis seedlings
ChIP-seq
Arabidopsis thaliana
6
21/05/2017
-
ENA
243
-
RNA Seq of hematopoietic stem and progenitor cells
RNA-seq of coding RNA
Mus musculus
9
18/05/2017
ENA
211
-
The Global Molecular Landscape of dormant Hematopoietic Stem Cells
RNA-seq of coding RNA from single cells
Mus musculus
384
18/05/2017
ENA
252
-
Time-Resolved Proteomics Extends Ribosome Profiling-Based Measurements of Protein Synthesis Dynamics
other, RNA-seq of coding RNA
Homo sapiens
12
18/05/2017
-
-
167
-
Time series of gene expression profiles describing the temporal response to prolonged heat stress in C. elegans
transcription profiling by array
Caenorhabditis elegans
36
17/05/2017
128
-
Transcription profiling of Physcomitrella patens reproductive organs from wt and Ppglr1/2 knock out samples
transcription profiling by array
Physcomitrella patens
6
17/05/2017
114
-
YAP regulates cell mechanics by controlling focal adhesion assembly
ChIP-seq
Homo sapiens
5
17/05/2017
-
ENA
116
-
The Rhizoctonia solani transcriptome during interaction with the host plant Lactuca sativa
RNA-seq of coding RNA
Rhizoctonia solani
36
17/05/2017
-
ENA
125
-
INTS8 mutations cause severe neurodevelopmental syndrome
RNA-seq of coding RNA
Homo sapiens
4
17/05/2017
ENA
90
-
Analysis of paired primary and metastatic cell lines identifies common DNA methylation changes in melanoma metastasis
methylation profiling by high throughput sequencing
Homo sapiens
7
17/05/2017
-
149
-
Gene expression profiling in Abatacept treated Rheumatoid Arthritis patients according to response
transcription profiling by array
Homo sapiens
36
17/05/2017
247
-
Gene expression profiles of TIE2 expressing Monocytes (TEMs)
transcription profiling by array
Homo sapiens
6
17/05/2017
78
-
DNA microarray analysis using murine cerebellum at P6
transcription profiling by array
Mus musculus
2
16/05/2017
110
-
RNA-seq of a panel of non-melanoma skin cancer lesions
RNA-seq of coding RNA
Homo sapiens
29
16/05/2017
-
ENA
552
Microarray for transcript expression comparison of normal and Sox18 dominant negative dermal spheres
transcription profiling by array
Mus musculus
6
16/05/2017
-
113
-
Immune response eQTL study in primary human monocytes stimulated with multiple microbial ligands under multiple time points
transcription profiling by array
Homo sapiens
938
16/05/2017
-
396
-
RNA-SEQ assay for wild type and CRISPR induced endoglin knockout human pulmonary artery smooth muscle cells (PASMC)
RNA-seq of coding RNA
Homo sapiens
6
16/05/2017
-
ENA
78
-
Gata6 network regulates epidermal junctional zone cell fate
ChIP-seq, transcription profiling by array
Mus musculus
31
16/05/2017
128
-
Genome-wide maps of Gata6 in primary mouse keratinocytes
ChIP-seq
Mus musculus
4
16/05/2017
-
-
69
-
Gene expression signature of Gata6 positive epidermal cells
transcription profiling by array
Mus musculus
12
16/05/2017
75
-
Gene expression signature of the three major epidermal differentiation compartments: interfollicular epidermis (IFE), hair follicle (HF) and sebaceous gland (SG)
transcription profiling by array
Mus musculus
9
16/05/2017
89
-
Epidermal overexpression of ∆NLef1 leads to deregulation of epidermal stem cell fate
transcription profiling by array
Mus musculus
6
16/05/2017
73
-
Comparative gene expression profiling of serum-free and FBS treated adherent primary pancreatic TIC cultures
transcription profiling by array
Homo sapiens
16
16/05/2017
-
69
-
Epigenetic regulation and transcriptional repression by Tet1 in the early post-implantation mouse embryo: WG Bisulfite sequencing
Bisulfite-seq
Mus musculus
8
15/05/2017
ENA
123
-
Epigenetic regulation and transcriptional repression by Tet1 in the early post-implantation mouse embryo: ChIP seq
ChIP-seq
Mus musculus
12
15/05/2017
-
ENA
264
-
Transcription profiling of HEK293 cells expressing YAP1, RASSF1A or both to study the effect of RASSF1A on YAP signalling in the HIPPO pathway
transcription profiling by array
Homo sapiens
4
15/05/2017
-
113
-
Expression RNA-Seq data of matched cases of pre-treatment Fine-needle aspiration (FNA) and the respective post neo-adjuvant treatment operative sample of breast cancer patients
RNA-seq of coding RNA
Homo sapiens
14
15/05/2017
ENA
336
-
Epigenetic regulation and transcriptional repression by Tet1 in the early post-implantation mouse embryo: Methylation data
methylation profiling by high throughput sequencing
Mus musculus
44
15/05/2017
-
ENA
148
-
Lineage-specific functions of TET1 in the post-implantation mouse embryo.: RNA-Seq of in vitro converted primed epiblast-like cells
RNA-seq of coding RNA
Mus musculus
15
15/05/2017
-
ENA
184
-
Comparative genomic hybridization by array of 51 Diffuse Large B-cell Lymphomas against a common pool of reference DNA from healthy individuals to identify recurrent copy number events in this disease
comparative genomic hybridization by array
Homo sapiens
51
15/05/2017
256
-
Comparative genomic hybridization by array of 18 treatment-refractory Diffuse Large B-cell Lymphomas against a common reference pool of DNA from healthy individuals to identify copy number events that could predict the relapse
comparative genomic hybridization by array
Homo sapiens
18
15/05/2017
208
-
Comparative genomic hybridization by array of 38 Diffuse Large B-Cell lymphomas against matched blood samples to identify recurrent copy number events
comparative genomic hybridization by array
Homo sapiens
38
15/05/2017
234
-
RNA-seq transcriptional profiling in human primary fetal and adult CD34+ hematopoietic stem/progenitor cells (HSPCs) erythroid progenitor cells (ProEs)
RNA-seq of coding RNA
Homo sapiens
16
15/05/2017
-
ENA
105
-
Lineage-specific functions of TET1 in the post-implantation mouse embryo
RNA-seq of coding RNA
Mus musculus
23
15/05/2017
-
ENA
99
-
Adipocyte-derived Exosomal miRNAs from Subcutaneous Adipose Tissue: A Novel Mechanism for Obesity-Related Disease
transcription profiling by array
Homo sapiens
12
15/05/2017
74
-
Fgf18 regulates hair cycle
transcription profiling by array
Mus musculus
4
15/05/2017
67
-
FGF18 affects hair cycle
transcription profiling by array
Mus musculus
2
15/05/2017
60
-
Transcription profiling by RNA-seq of Arabidopsis treated with the Strobilurin kresoxim-methyl to study the effect on leaf growth
RNA-seq of coding RNA
Arabidopsis thaliana
6
13/05/2017
-
ENA
118
-
Genome-wide identification of bZIP29 target genes in Arabidopsis cell cultures
ChIP-seq
Arabidopsis thaliana
3
13/05/2017
ENA
180
-
Skeletal muscle gene expression in the wild type and the GAA knock-out mice, a model of Pompe disease
RNA-seq of coding RNA
Mus musculus
9
13/05/2017
-
-
61
-
Bacterial endosymbionts control host sexuality and reveal reproductive genes of early divergent fungi
RNA-seq of coding RNA
Rhizopus microsporus
12
13/05/2017
-
-
47
-
The male determining M-factor of the global disease vector Musca domestica is a paralog of the generic splice factor CWC22
RNA-seq of coding RNA
Musca domestica
4
12/05/2017
-
ENA
137
-
Expression Profiling of Term Placenta in Viviparous Mammals by RNA-Seq
RNA-seq of coding RNA
Ateles fusciceps, Bos taurus, Canis lupus familiaris, Dasypus novemcinctus, Loxodonta africana, Monodelphis domestica, Mus musculus, Pan paniscus
8
12/05/2017
ENA
78
-
Expression profiling in cellular miRNAs of human bone marrow stromal cells
other
Homo sapiens
6
12/05/2017
-
110
-
Expression profiling in exosomal miRNAs secreted from human bone marrow stromal cells
other
Homo sapiens
6
12/05/2017
-
110
-
The gene expression profiles of human bone marrow stromal cells
transcription profiling by array
Homo sapiens
6
12/05/2017
141
-
The role of PCNA ubiquitylation during unperturbed genome replication in S.pombe
other
Schizosaccharomyces pombe
14
12/05/2017
-
-
76
-
Cyflumetofen resistance in the two-spotted spider mite Tetranychus urticae
transcription profiling by array
Tetranychus urticae
4
12/05/2017
55
-