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AccessionTitleTypeOrganismAssaysReleasedProcessedRawViewsAtlas
ChIP-seq of CD117-positive primary hematopoietic precursor cell from Meer mice that carry a leukemogenic knock-in of an inducible ENL-ER portion into the mouse Mll locus
ChIP-seq
Mus musculus
7
Today
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ENA
2
-
Transcription profiling by array of human hepatocarcinoma SMMC-7721 cells treated with a new compound IMB5043 against untreated controls
transcription profiling by array
Homo sapiens
2
Yesterday
-
-
-
Microarray gene expression profiling of microglia from control and C6 glioma tumor-bearing brain hemisphere in the rat
transcription profiling by array
Rattus norvegicus
8
Yesterday
-
4
-
RNA-Seq analysis of an industry isolated Pseudomonas aeruginosa strain following exposure to preservatives and product formulations
RNA-seq of coding RNA
Pseudomonas aeruginosa
32
20/01/2018
-
ENA
23
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Transcriptional profiling by array of chronic myeloid leukaemia (CML) stem/progenitor cells (CD34+38-) treated with tyrosine kinase inhibitors (imatinib, dasatinib and nilotinib) at different time points (8 hours and 7 days) against untreated controls
transcription profiling by array
Homo sapiens
49
20/01/2018
-
285
-
Time-lapse Deep-seq of E. coli Metabolite Production Pathway
DNA-seq
Escherichia coli K-12
26
19/01/2018
-
ENA
27
-
Genome-wide characterisation of DNA methylation in an invasive Lepidopteran pest, the cotton bollworm Helicoverpa armigera
methylation profiling by high throughput sequencing
Helicoverpa armigera
1
19/01/2018
-
ENA
15
-
RNA-seq transcriptome profiling of the psychrophilic diatom Fragilariopsis cylindrus under six treatments simulating conditions within sea ice
RNA-seq of coding RNA
Fragilariopsis cylindrus
15
18/01/2018
-
ENA
17
-
Ribosome profiling of the retrovirus murine leukemia virus in Rat2 cells
RNA-seq of coding RNA
Rattus norvegicus
9
17/01/2018
-
ENA
34
-
Transcription profiling by array of oral squamous cell cancer (OSCC) surgical margins defined by narrow band imaging
transcription profiling by array
Homo sapiens
49
17/01/2018
37
-
RNA-seq of human normal mammary gland cells FACS sorted into three populations: ALDH+, ALDH-CD44+CD24-, and ALDH-CD44-CD24+
RNA-seq of coding RNA
Homo sapiens
9
17/01/2018
-
ENA
14
-
microRNA profiling by array of paired samples tumor tissue/normal adjacent tissue from colon cancer patients
microRNA profiling by array
Homo sapiens
10
17/01/2018
-
22
-
MicroRNA analysis in HPV-positive and HPV-negative cervical cancer cell lines
microRNA profiling by array
Homo sapiens
6
16/01/2018
-
23
-
MicroRNA expression profile in human foreskin keratinocytes (HFKs) transduced with retroviral vectors carrying E6 and E7 genes of either HPV6 or HPV16 and with the LXSN empty vector
microRNA profiling by array
Homo sapiens
23
16/01/2018
-
21
-
Transcriptional profiling of triple-negative breast cancer cell lines treated with OTX015
transcription profiling by array
Homo sapiens
11
16/01/2018
33
-
Effect of HE4 overexpression or treatment with recombinant HE4 protein on OVCAR8 ovarian cancer cells
transcription profiling by array
Homo sapiens
12
15/01/2018
31
-
Transcription profiling by array of U-2987-MG glioma derived cell line to investigate the effect of Snail1 overexpression compared to control
transcription profiling by array
Homo sapiens
8
15/01/2018
-
35
-
RNA-seq of platelets derived from blood of healthy human donors in response to physiological stimuli collagen or Thrombin Receptor Activating Peptide compared to untreated controls
RNA-seq of coding RNA
Homo sapiens
9
15/01/2018
-
ENA
17
-
Whole transcriptome profiling by microarray of monocytes stimulated with LPS and treated with trabectedin, lurbinectedin or doxorubicin
transcription profiling by array
Homo sapiens
16
15/01/2018
20
-
Transcription profiling by array of carcinoma-stem-like cells (CSC) extracted from a primary ovarian cancer cell line
transcription profiling by array
Homo sapiens
6
15/01/2018
15
-
Comparative transcriptomics of Rhizobium mesoamericanum STM3625, Cupriavidus taiwanensis LMG19424 and Burkholderia phymatum STM815 when induced by root exudates of Mimosa pudica
RNA-seq of coding RNA
Burkholderia phymatum STM815, Cupriavidus taiwanensis LMG 19424, Rhizobium mesoamericanum STM3625
18
15/01/2018
-
ENA
20
-
microRNA expression profiling of CML and normal quiescent cells
microRNA profiling by array
Homo sapiens
10
12/01/2018
-
41
-
Immune transcriptional profiling in end-stage renal disease
transcription profiling by array
Homo sapiens
480
11/01/2018
57
-
Dry seed transcriptome differences associated with relief of sly1-2 seed dormancy through after-ripening or overexpression of the gibberellin-receptor GID1b
transcription profiling by array
Arabidopsis thaliana
12
10/01/2018
46
-
Fibroblasts potentiate melanoma cells in vitro invasivity induced by UV-irradiated keratinocytes - transcription profiling
transcription profiling by array
Homo sapiens
10
10/01/2018
-
36
-
Targeted next generation sequencing of cfDNA from lung cancer patients enrolled in the GALAXY-1 trial (NCT01348126)
DNA-seq
Homo sapiens
306
10/01/2018
-
ENA
49
-
High resolution survey of drought, high salinity, heat and cold stress-induced transcriptome of bioenergy feedstock model plant western poplar (Populus trichocarpa) accession Nisqually-1
RNA-seq of coding RNA
Populus trichocarpa
81
10/01/2018
-
ENA
47
-
Transgenic expression of BEN, a member of TFII-I family, in various murine adipose tissues
RNA-seq of coding RNA
Mus musculus
16
10/01/2018
-
ENA
45
-
Dual IRE1 RNase functions dictate glioblastoma development
transcription profiling by array
Homo sapiens
119
09/01/2018
-
23
-
Gene expression profile of Huh7 cells upon knock-down of FOXA2 or FOXA2-DS-S
transcription profiling by array
Homo sapiens
9
09/01/2018
265
-
Transduced cord blood CD34+ cells with empty vector, AML1-ETO and ETV6-RUNX1
transcription profiling by array
Homo sapiens
30
07/01/2018
-
58
-
Stromal myofibroblasts drive tumorigenesis in Peutz-Jeghers Syndrome polyposis models
RNA-seq of coding RNA
Mus musculus
15
05/01/2018
ENA
77
-
Transcription profiling by array of human macrophages treated with miR-182 and infected with Francisella tularensis
transcription profiling by array
Homo sapiens
12
05/01/2018
-
56
-
miRNA profiling of human umbilical cord derived mesenchymal stem cells in the process of smooth muscle cell differentiation
microRNA profiling by array
Homo sapiens
9
04/01/2018
-
-
-
RNAseq analysis of Xcc strain B100 in minimum media
RNA-seq of coding RNA
Xanthomonas campestris pv. campestris
1
04/01/2018
-
ENA
56
-
RNA-seq of WTAP knockdown human pluripotent stem cells during the exit from pluripotency induced by Activin/Nodal inhibition
RNA-seq of coding RNA
Homo sapiens
18
04/01/2018
-
ENA
52
-
Transcription profiling by array of neonatal mouse cardiomyocytes (NMC) cultured in hypoxia (3% O2) with and without a lentiviral shRNA-mediated knockdown of Sf3b1 to investigate alternative splicing
transcription profiling by array
Mus musculus
6
03/01/2018
-
43
-
Cytokine-mediated natural killer cells effects impair hematopoietic stem cell function
transcription profiling by array
Mus musculus
16
02/01/2018
-
49
-
RNA-seq analysis of grxs17 seedlings
RNA-seq of coding RNA
Arabidopsis thaliana
3
02/01/2018
-
ENA
46
-
Pdx1 occupancy during mouse and human development
ChIP-seq
Mus musculus
3
02/01/2018
ENA
52
-
RNA-seq of human U2OS cells depleted of NUAK1 by shRNA compared to control
RNA-seq of coding RNA
Homo sapiens
6
01/01/2018
-
ENA
67
-
Transcription profiling by array of adult mouse lung exposed to room air (control) or 100% oxygen between postnatal days 0 to 4
transcription profiling by array
Mus musculus
6
01/01/2018
-
46
-
Detecting Early Signs of Heat and Drought Stress in Phoenix dactylifera (Date Palm)
RNA-seq of coding RNA
Phoenix dactylifera
32
01/01/2018
-
ENA
55
-
Microarray experiment to characterise the signalling pathways downstream SUCNR1 activation in murine Neural Stem Cells (NSCs)
transcription profiling by array
Mus musculus
12
01/01/2018
-
48
-
Microarray experiment of murine macrophages co-cultured with neural stem cells in the presences of LPS
transcription profiling by array
Mus musculus
16
01/01/2018
-
47
-
Characterization of the transcriptional response to hypoxia in MDA-MB-231-shCAIX, MCF7-shCAIX and the respective control cells grown as multicellular spheroids under hypoxic or normoxic conditions
transcription profiling by array
Homo sapiens
16
01/01/2018
-
74
-
RNA-seq analysis of normoxic and hypoxic tumor-associated macrophages from wild type or REDD1 knockout mice
RNA-seq of coding RNA
Mus musculus
16
01/01/2018
-
ENA
57
-
RIP-chip by array of intestinal tumours from Elavl1 overexpressing and wild-type mice in a mouse model of colitis associated cancer
RIP-chip by array
Mus musculus
6
01/01/2018
-
38
-
Transcription profiling by array of intestinal tumours from Elavl1 overexpressing and wild-type mice in a mouse model of colitis associated cancer
transcription profiling by array
Mus musculus
6
01/01/2018
-
32
-
Translation profiling by array of mouse epithelial cell lines (CMT93) in which HuR is overexpressed or knocked down
translation profiling
Mus musculus
6
01/01/2018
-
27
-
Gene expression profiling of 621-101 cells with rapamycin treatment and Rheb downregulation
transcription profiling by array
Homo sapiens
12
01/01/2018
-
56
-
Genome-scale transcriptomic study into the role of AbsA2 in regulating antibiotic biosynthesis in Streptomyces coelicolor
transcription profiling by array
Streptomyces coelicolor A3(2)
12
01/01/2018
33
-
Genome-scale ChIP-on-chip study into the role of AbsA2 in regulating antibiotic biosynthesis in Streptomyces coelicolor
ChIP-chip by array
Streptomyces coelicolor A3(2)
12
01/01/2018
26
-
Transcriptome responses in the abscission, distal and proximal regions of the flower pedicel during shedding of flower in Euphorbia pulcherrima
RNA-seq of coding RNA
Euphorbia pulcherrima
36
31/12/2017
-
ENA
46
-
RNA-IP of TAP-tagged 4EIP in Trypanosoma brucei
RNA-seq of coding RNA
Trypanosoma brucei
4
31/12/2017
-
ENA
36
-
Control human blood RNA
RNA-seq of coding RNA
Homo sapiens
3
31/12/2017
-
ENA
37
-
Deconvolution ChIP-seq profiling of UTF and RPA194 in K562 cells to identify analogous enhancer structures on mouse and human ribosomal RNA genes
ChIP-seq
Homo sapiens
4
31/12/2017
-
ENA
40
-
Transcription profiling by array of Arabidopsis thaliana columbia and DEWAX2 overexpression plants line stems
transcription profiling by array
Arabidopsis thaliana
6
31/12/2017
-
24
-
Trigeminal Ganglion Transcriptome Analysis in Rat Models of Medication Overuse Headache Reveals Coherent and Widespread Induction of Pronociceptive Gene Expression Patterns
transcription profiling by array
Rattus norvegicus
2
31/12/2017
-
26
-
Differential expression analysis of human small RNAs in young normal, old normal (protected)) and old osteoarthritis (unprotected ) knee cartilage
microRNA profiling by array
Homo sapiens
29
31/12/2017
-
31
-
Differential expression analysis of small RNAs in young normal and old osteoarthritis cartilage
microRNA profiling by array
Homo sapiens
12
31/12/2017
-
26
-
RNA-seq of hippocampal samples from IL-18KO/APP/PS1 , WT, IL-18KO, and APP/PS1 mice
RNA-seq of coding RNA
Mus musculus domesticus
16
31/12/2017
-
ENA
25
-
Molecular response of Atinian elm during vessel invasion by vascular pathogen Ophiostoma novo-ulmi
transcription profiling by array
Ulmus minor
15
31/12/2017
-
22
-
Simple sequence repeat identification for RSS1 gene in multiple varieties of Oryza sativa
DNA-seq
Oryza sativa, Oryza sativa Indica Group, Oryza sativa Japonica Group
6
31/12/2017
-
ENA
25
-
Simple sequence repeat identification for RBOHB gene in multiple varieties of Oryza sativa
DNA-seq
Oryza sativa, Oryza sativa Indica Group, Oryza sativa Japonica Group
6
31/12/2017
-
ENA
23
-
Gene expression profiling of acute myeloid leukemia samples from Polish adult AML-M1 and M2 patients
transcription profiling by array
Homo sapiens
118
31/12/2017
-
34
-
Transcription profiling of HL-60 acute myeloid leukemia cells treated with Daunorubicin (DNR), Cytarabin (Ara-C), or NADPH oxidase inhibitor VAS2870
transcription profiling by array
Homo sapiens
12
31/12/2017
27
-
Microarray analysis of Du145, PC3 and LNCaP human prostate cancer cell lines
transcription profiling by tiling array
Homo sapiens
36
31/12/2017
-
42
-
RNA-Seq analysis in bovine muscle
RNA-seq of coding RNA
Bos taurus
8
31/12/2017
-
ENA
32
-
RNAseq of coding RNA in the liver, spleen, kidney, abdominal muscle and gonadal adipose tissue of knock out mice and wild type controls
RNA-seq of coding RNA
Mus musculus
94
31/12/2017
-
ENA
30
-
Next Generation Sequencing Analysis of Wild Type and VAChTNkx2.1-Cre-flox/flox Hippocampal Transcriptomes
RNA-seq of coding RNA
Mus musculus
7
31/12/2017
ENA
25
-
Defining the genomic occupancy of the general regulatory factor Abf1 in budding yeast
ChIP-chip by array
Saccharomyces cerevisiae
3
31/12/2017
-
21
-
Wilms tumour arises from a precursor cell capable of generating the entire kidney
transcription profiling by array
Homo sapiens
32
31/12/2017
-
26
-
Transcription of Alkylsuccinate Synthase Genes in Desulfatibacillum alkenivorans AK-01
transcription profiling by array
Desulfatibacillum alkenivorans
12
31/12/2017
16
-
The genome-scale DNA-binding of FadR transcription factor in Sulfolobus acidocaldarius
ChIP-seq
Sulfolobus acidocaldarius DSM 639
6
30/12/2017
-
ENA
23
-
Rat infection with Trypanosoma rhodesiense clinical isolates
RNA-seq of coding RNA
Rattus norvegicus
10
30/12/2017
-
ENA
22
-
Transcription profiling of endometrial cancer comparing aggressive primary tumors and metastases
transcription profiling by array
Homo sapiens
111
30/12/2017
77
-
Transcription profiling by array of a pancreatic cancer cell line treated with 8 different statins compared with untreated or vehicle treated controls
transcription profiling by array
Homo sapiens
53
30/12/2017
30
-
Molecular and cellular dynamics in the skin, the lymph nodes and the blood of the immune response to intradermal injection of Modified Vaccinia Ankara vaccine
transcription profiling by array
Macaca fascicularis
21
29/12/2017
-
30
-
RNA seq of different species of Salsoleae with different photosynthetic types
RNA-seq of coding RNA
Hammada scoparia, Salsola divaricata, Salsola oppositifolia, Salsola webbii
24
29/12/2017
-
ENA
25
-
Effect of silencing DLC1 (Deleted in Liver Cancer 1) in Human Umbilical Vein Endothelial Cells (HUVEC)
transcription profiling by array
Homo sapiens
11
28/12/2017
-
57
-
Activin/Nodal-dependent N6-methyladenosine (m6A) deposition in human pluripotent stem cells
RIP-seq, methylation profiling by high throughput sequencing
Homo sapiens
12
26/12/2017
-
ENA
56
-
Analysis of Cas9/sgRNA mutagenic activity at a variety of loci in zebrafish (Run6)
DNA-seq
Danio rerio
17
25/12/2017
ENA
46
-
Identification of drought responsive genes at reproductive stage in upland rice variety Nagina22 through comparative microarray analysis
transcription profiling by array
Oryza sativa Indica Group
6
25/12/2017
-
37
-
North American Beaver (Castor canadensis) RNAseq 16 pooled tissue samples
RNA-seq of coding RNA
Castor canadensis
1
24/12/2017
-
ENA
37
-
Transcription profiling of Arabidopsis srk2abgh mutant plants under a dehydration stress condition
transcription profiling by array
Arabidopsis thaliana
4
24/12/2017
-
34
-
Transcriptional profiling using microarrays to elucidate the effects of partial whiB1 gene deletion in Mycobacterium tuberculosis H37Rv
transcription profiling by array
Mycobacterium tuberculosis
8
22/12/2017
-
36
-
Giant marker chromosomes in cancer
genotyping by array
Homo sapiens
4
22/12/2017
-
36
-
ACE-Scan of the natural add riboswitch aptamer on 10^10 Gen1 DNA microarrays with varying buffer temperatures and Mg2+ cation concentrations
comparative genomic hybridization by array
synthetic construct
24
20/12/2017
-
5
-
ACE-Scan of the thrombin DNA aptamer on 10^10 Gen1 DNA microarrays with sodium and potassium buffers in two colors
comparative genomic hybridization by array
synthetic construct
12
20/12/2017
-
2
-
ACE-Scan of the cocaine DNA aptamer on 10^12 Gen1 DNA microarray
comparative genomic hybridization by array
synthetic construct
6
20/12/2017
-
2
-
ACE-Scan of the ATP RNA aptamer on 10^12 Gen1 DNA microarray
comparative genomic hybridization by array
synthetic construct
1
20/12/2017
-
2
-
ACE-Scan of the ATP DNA aptamer on various density Gen2 DNA microarrays
comparative genomic hybridization by array
synthetic construct
6
20/12/2017
-
3
-
ACE-Scan of the ATP DNA aptamer on 10^12 density Gen1 DNA microarray
comparative genomic hybridization by array
synthetic construct
6
20/12/2017
-
3
-
Bulk RNA-seq validation experiment comparing blood from healthy donors and two groups of metastatic melanoma patients: responders and non-responders to anti-PD-1 immunotherapy
RNA-seq of coding RNA
Homo sapiens
12
20/12/2017
-
ENA
180
-
Genome wide analysis of STAT3-mediated transcription and binding sites in mouse female germ stem cell (ChIP-seq)
ChIP-seq
Mus musculus
2
20/12/2017
-
ENA
43
-
Genome wide analysis of STAT3-mediated transcription and binding sites in mouse female germ stem cell (RNA-seq)
RNA-seq of coding RNA
Mus musculus
4
20/12/2017
-
ENA
56
-
Transcription profiling by array to investigate doxorubicin-induced toxicity in human cardiomyocytes derived from embryonic stem cell line SA121
transcription profiling by array
Homo sapiens
51
19/12/2017
-
65
-
Transcription profiling by array of decidual CD8+ CCR7-CD45RA- Effector-Memory T cells
transcription profiling by array
Homo sapiens
16
19/12/2017
-
67
-
Methylation profiling identifies two subclasses of squamous cell carcinoma related to distinct cell types of origin
methylation profiling by array
Homo sapiens
92
19/12/2017
-
54
-