E-TABM-99 - Transcription profiling of Bordetella pertussis strains in response to glutamate availablility

Status
Released on 4 December 2006, last updated on 2 May 2014
Organism
Bordetella bronchiseptica, Bordetella parapertussis, Bordetella pertussis
Samples (3)
Array (1)
Protocols (7)
Description
B. pertussis mid-log phase cultures were washed twice and resuspended at a starting OD at 600 nm of 0.05 in media containing various concentrations of glutamate.
Experiment types
transcription profiling by array, dose response, strain or line
Contacts
Citation
Growth Phase- and Nutrient Limitation-Associated Transcript Abundance Regulation in Bordetella pertussis. Nakamura, Mari M.; Liew, Sin-Yee; Cummings, Craig A.; Brinig, Mary M.; Dieterich, Christine; Relman, David A. Infect Immun 74(10):5537 (2006), PMID:16988229
MIAME
PlatformsProtocolsVariablesProcessedRaw
Files
Investigation descriptionE-TABM-99.idf.txt
Sample and data relationshipE-TABM-99.sdrf.txt
Raw data (1)E-TABM-99.raw.1.zip
Array designA-MEXP-235.adf.txt
R ExpressionSetE-TABM-99.eSet.r