E-TABM-865 - Transcription profiling of mouse liver and spleen from strains that are susceptible and tolerant to trypanosome infection

Status
Released on 2 December 2009, last updated on 29 October 2015
Organism
Mus musculus
Samples (23)
Array (1)
Protocols (6)
Description
Tissues were harvested from mice from two congenic strains (Tir1CC and Tir3CC) and their two control strains (Tir1AA and Tir3AA). The congenic strains were bred from inbred lines known to be susceptible (A/J) and tolerant (C57BL/6) to Trypanosome infection, such that C57BL/6 genomic regions underlying QTL for trypanotolerance were present in an A/J genetic background. Liver and spleen tissues were harvested. For each strain RNA was prepared from various tissues of twenty mice. For each condition, RNA extracts from individuals were pooled (5 per pool) prior to hybridisation.
Experiment types
transcription profiling by array, co-expression, organism part comparison, strain or line
Contact
Citation
MIAME
PlatformsProtocolsVariablesProcessedRaw
Files
Investigation descriptionE-TABM-865.idf.txt
Sample and data relationshipE-TABM-865.sdrf.txt
Raw data (2)E-TABM-865.raw.1.zip, E-TABM-865.raw.2.zip
Processed data (1)E-TABM-865.processed.1.zip
Array designA-AFFY-45.adf.txt
Links