E-TABM-445 - Methylation profiling of human normal somatic tissues, placenta, sperm and an immortalized cell line to identify tissue-specific differentially methylated regions

Status
Submitted on 29 February 2008, released on 30 April 2008, last updated on 2 May 2014
Organism
Homo sapiens
Samples (31)
Array (1)
Protocols (4)
Description
Genome-wide DNA methylation reference profiles of 13 normal somatic tissues, placenta, sperm and an immortalized cell line using the meDIP technique and a custom oligonucleotide array targetting the vast majority of annotated TSSs and non-promoter CGIs in the human genome.
Experiment types
methylation profiling by array, cell type comparison, tiling path
Contact
Citation
An integrated resource for genome-wide identification and analysis of human tissue-specific differentially methylated regions (tDMRs). Rakyan, Vardhman K.; Down, Thomas A.; Thorne, Natalie P.; Flicek, Paul; Kulesha, Eugene; Graf, Stefan; Tomazou, Eleni M.; Backdahl, Liselotte; Johnson, Nathan; Herberth, Marlis; Howe, Kevin L.; Jackson, David K.; Miretti, Marcos M.; Fiegler, Heike; Marioni, John C.; Birney, Ewan; Hubbard, Tim J.P.; Carter, Nigel P.; Tavare, Simon; Beck, Stephan. Genome Res 18(9):gr.077479.108v2 (2008), Europe PMC 18577705
MIAME
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