E-TABM-438 - Transcription profiling of wild type, Pfsir2A knock-out and Pfsir2B knock-out Plasmodium falciparum intra-erythrocytic stages

Status
Submitted on 19 February 2008, released on 1 May 2008, last updated on 2 May 2014
Organism
Plasmodium falciparum
Samples (22)
Array (1)
Protocols (6)
Description
Pfsir2A and Pfsir2B KOs expression profiling in intra-erythrocytic stages
Experiment types
transcription profiling by array, co-expression, development or differentiation, individual genetic characteristics, replicate
Contact
Citation
Sir2 paralogues cooperate to regulate virulence genes and antigenic variation in Plasmodium falciparum. Tonkin CJ, Carret CK, Duraisingh MT, Voss TS, Ralph SA, Hommel M, Duffy MF, Silva LM, Scherf A, Ivens A, Speed TP, Beeson JG, Cowman AF. PLoS Biol 7(4):e84 (2009), Europe PMC 19402747
MIAME
PlatformsProtocolsVariablesProcessedRaw
Files
Investigation descriptionE-TABM-438.idf.txt
Sample and data relationshipE-TABM-438.sdrf.txt
Raw data (2)E-TABM-438.raw.1.zip, E-TABM-438.raw.2.zip
Processed data (1)E-TABM-438.processed.1.zip
Additional data (1)E-TABM-438.additional.1.zip
Array designA-AFFY-112.adf.txt
R ExpressionSetE-TABM-438.eSet.r
Links