E-TABM-384 - Transcription profiling of Pectobacterium atrosepticum wild and ExpI mutants to determine the quorum sensing regulon

Status
Submitted on 21 November 2007, released on 1 July 2008, last updated on 2 May 2014
Organism
Pectobacterium atrosepticum
Samples (2)
Array (1)
Protocols (6)
Description
Genome-wide in planta determination of the quorum sensing regulon in Pectobacterium atrosepticum, through gene expression analysis of ExpI mutants using Agilent custom microarrays.
Experiment types
transcription profiling by array, genetic modification
Contact
Citations
Genome-wide in planta determination of the quorum sensing regulon in Pectobacterium atrosepticum. Liu H., Coulthurst S., Pritchard L., Hedley P.E., Ravensdale M., Humphris S., Burr T., Takle G., Birch P. R. J., Salmond G. P. C., Toth I. K.
Quorum sensing coordinates brute force and stealth modes of infection in the plant pathogen Pectobacterium atrosepticum. Liu H, Coulthurst SJ, Pritchard L, Hedley PE, Ravensdale M, Humphris S, Burr T, Takle G, Brurberg MB, Birch PR, Salmond GP, Toth IK. :e1000093 (2008), Europe PMC 18566662
MIAME
PlatformsProtocolsVariablesProcessedRaw
Files
Investigation descriptionE-TABM-384.idf.txt
Sample and data relationshipE-TABM-384.sdrf.txt
Raw data (1)E-TABM-384.raw.1.zip
Array designA-MEXP-942.adf.txt
Links