E-SMDB-3396 - Transcription profiling of juvenile and adult calvarial bone

Submitted on 5 July 2005, released on 5 July 2005, last updated on 4 June 2014
Mus musculus
Samples (0)
Array (1)
Protocols (1)
Background: It has widely been observed that young children are capable of reossifying large calvarial defects, while adults lack this endogenous tissue-engineering capacity. The ability of juvenile animals to regenerate calvarial defects has been investigated in multiple animal models, including mice. In this study, the authors used cDNA microarrays to investigate the expression of osteogenesis-associated genes upstream and downstream of Runx2 in juvenile and adult mouse calvaria. Methods: Nonsuture-associated parietal bone discs were harvested from 6-day-old (n = 50) and 60-day-old (n = 35) male CD-1 mice. After separation of the underlying dura mater and overlying pericranium, the calvarial discs were snap-frozen and RNA was extracted from pooled samples of calvaria for microarray analysis. Genes analyzed included cytokines, receptors, and cell-surface and matrix proteins both upstream and downstream of Runx2. Results: Genes associated with the Runx2 pathway had notably higher levels in the juvenile versus adult calvaria. All genes except for osteocalcin were expressed at least twofold higher in the juvenile calvaria. This pattern was validated with quantitative real-time polymerase chain reaction. In addition, mRNA for potent osteoinductive growth factors was present at higher levels in the juvenile compared with the adult calvaria. Conclusions: These findings reflect a genomic environment of active osteoblast differentia-tion and ossification in the juvenile calvaria compared with the adult aquiescent calvarial tissue. These data suggest that a decreased osteogenic potential of adult calvarial osteoblasts may, in part, explain the inability of adult animals to heal calvarial defects.
Experiment types
transcription profiling by array, unknown experiment type
Differential transcriptional expression profiles of juvenile and adult calvarial bone. Aalami OO, Nacamuli RP, Salim A, Fong KD, Lenton KA, Song HM, Fang TD, Longaker MT. Plast Reconstr Surg 115:1986-94 (2005-06-01), Europe PMC 15923847
Investigation descriptionE-SMDB-3396.idf.txt
Sample and data relationshipE-SMDB-3396.sdrf.txt
Raw data (1)E-SMDB-3396.raw.1.zip
Processed data (1)E-SMDB-3396.processed.1.zip
Array designA-SMDB-695.adf.txt