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E-MTAB-9912 - Studying changes in chromatin accessibility in A549 cells by ATAC-seq after glucocorticoid re-induction

Status
Last updated on 14 December 2020, released on 3 May 2021
Organism
Homo sapiens
Samples (4)
Protocols (8)
Description
We performed ATAC-seq in the A549 cell line. Cells were treated with either 100 nM dexamethasone or 0.1% ethanol. After 4 hours, cells were washed 2x with PBS and cultured in hormone-free medium for 24 hours, after which cells were treated again for 4 hours with either 100 nM dexamethasone or 0.1% ethanol.
Experiment types
ATAC-seq, compound treatment design
Contacts
MINSEQE
Exp. designProtocolsVariablesProcessedSeq. reads
Files
Links