E-MTAB-7219 - Transcription profiling by array of MG-63 cells grown on different biomaterials used in bone grafts

Status
Submitted on 1 June 2014, last updated on 25 September 2018, released on 5 October 2018
Organism
Homo sapiens
Samples (69)
Array (1)
Protocols (9)
Description
During the past decades, there have been major advances in the field of biomaterials, thereby generating a vast variety of materials for a broad range of tissue engineering and regeneration applications. Although gene expression profiling has been used occasionally in biomaterial research, its usefulness for understanding cell-biomaterial interactions should be further explored for it to fulfill its promise as a tool to assess and improve material properties. Here, the transcriptional landscape induced by 23 materials is explored with a variety of properties within the scope of bone regeneration. An osteoblast cell line is used to identify the gene expression profiles that can be adopted in response to biophysical and chemical cues. It is shown that TGF-beta and WNT signaling may be involved in the cellular response to osteoinductive materials along with differential cell adhesion kinetics via attenuated FAK signaling. The previously reported effect of calcium and phosphate on BMP2 and TGF-beta signaling is confirmed and the biological effect of the addition of nanohydroxyapatite in poly (d,l-lactic acid) polymer particles is studied. Together with future applications, this approach will help researchers understand cellular responses in relation to material properties, which will promote the development of more effective biomaterials for applications in tissue regeneration.
Experiment type
transcription profiling by array 
Contacts
Citation
Exploring the Material-Induced Transcriptional Landscape of Osteoblasts on Bone Graft Materials. Groen N, Tahmasebi N, Shimizu F, Sano Y, Kanda T, Barbieri D, Yuan H, Habibovic P, van Blitterswijk CA, de Boer J. , PMID:26046651
MIAME
PlatformsProtocolsVariablesProcessedRaw
Files
Investigation descriptionE-MTAB-7219.idf.txt
Sample and data relationshipE-MTAB-7219.sdrf.txt
Raw data (1)E-MTAB-7219.raw.1.zip
Processed data (1)E-MTAB-7219.processed.1.zip
Array designA-MEXP-2087.adf.txt
Links