E-MTAB-6943 - Ago-RIP-Seq Analysis to Identify miR-375 Targets in Human Macrophages

Status
Submitted on 15 March 2017, last updated on 8 February 2019, released on 8 February 2019
Organism
Homo sapiens
Samples (12)
Protocols (6)
Description
miR-375 is not expression in human macrophages, however there is an enhanced accumulation of miR-375 in macrophages upon coculture with breast cancer cells. The target landscape of this miR in macrophages is not known. Ago-RIP-Seq was aimed to identify miR-375 targets in human macrophages.
Experiment types
RIP-seq, cell type comparison design, cellular modification design, compound treatment design, genetic modification design
Contacts
MINSEQE
Exp. designProtocolsVariablesProcessedSeq. reads
Files
Investigation descriptionE-MTAB-6943.idf.txt
Sample and data relationshipE-MTAB-6943.sdrf.txt
Processed data (1)E-MTAB-6943.processed.1.zip
Links