E-MTAB-6535 - RNA-seq of an adult Porites rus colony derived from Indonesia

Status
Submitted on 18 July 2017, last updated on 25 May 2018, released on 25 May 2018
Organism
Porites rus
Samples (1)
Protocols (4)
Description
An adult P. rus colony was imported from Indonesia following the CITES protocols (Permit number 14846/IV/SATS-LN/2007) and kept in the Animal Facilities of the Justus Liebig University, Giessen. The colony was maintained in a circulating artificial seawater system at approximately 26 °C with 20-40 µmol photons m-2s-1 (T5 light) of photosynthetically active radiation on a 10:14 h light-dark cycle. A fragment of approx. 9 cm2 was separated from the colony and used as a source of tissue for hologenomic DNA/RNA isolation. Tissue was removed by scraping the fragment´s surface with a sterilized razor blade.
Experiment types
RNA-seq of coding RNA, stimulus or stress design
Contact
MINSEQE
Exp. designProtocolsVariablesProcessedSeq. reads
Files
Investigation descriptionE-MTAB-6535.idf.txt
Sample and data relationshipE-MTAB-6535.sdrf.txt
Links