E-MTAB-6357 - Analysis of Cas9/sgRNA mutagenic activity at a variety of loci in zebrafish (Run 9)

Status
Submitted on 26 March 2014, released on 15 December 2017, last updated on 15 January 2018
Organism
Danio rerio
Samples (16)
Protocols (6)
Description
Analysis of Cas9/sgRNA mutagenic activity at a variety of loci in zebrafish. Each loci has a control, where no Cas9/sgRNA were injected. This is amplicon sequencing with Illumina, after PCR amplification. Data was processed with ampliCan R package version 1.1.1.
Experiment types
RNA-seq of coding RNA, genotype design
Contact
MINSEQE
Exp. designProtocolsVariablesProcessedSeq. reads
Files
Investigation descriptionE-MTAB-6357.idf.txt
Sample and data relationshipE-MTAB-6357.sdrf.txt
Processed data (1)E-MTAB-6357.processed.1.zip
Additional data (1)E-MTAB-6357.additional.1.zip
Links