E-MTAB-6310 - Analysis of Cas9/sgRNA mutagenic activity at a variety of loci in zebrafish (Run6)

Status
Submitted on 19 November 2013, released on 25 December 2017, last updated on 16 January 2018
Organism
Danio rerio
Samples (17)
Protocols (6)
Description
Analysis of Cas9/sgRNA mutagenic activity at a variety of loci in zebrafish. Each loci has a control, where no Cas9/sgRNA were injected. This is amplicon sequencing with Illumina, after PCR amplification. Data was processed with ampliCan R package version 1.1.1.
Experiment types
DNA-seq, case control design, genetic modification design
Contact
MINSEQE
Exp. designProtocolsVariablesProcessedSeq. reads
Files
Investigation descriptionE-MTAB-6310.idf.txt
Sample and data relationshipE-MTAB-6310.sdrf.txt
Processed data (1)E-MTAB-6310.processed.1.zip
Additional data (1)E-MTAB-6310.additional.1.zip
Links