E-MTAB-5776 - Microarray transcription profiling of healthy and PVYNTN infected potato tuber tissues (necrotic and non-necrotic)

Status
Submitted on 1 January 2010, last updated on 6 March 2018, released on 16 May 2018
Organism
Solanum tuberosum
Samples (16)
Array (1)
Protocols (7)
Description
To extend our understanding of systemic necrosis in susceptible potato tubers infected with the necrotic strain of Potato virus Y (PVYNTN) gene expression was compared between healthy and infected non-necrotic and necrotic (both non-necrotic and necrotic tissue) potato tubers.
Experiment types
transcription profiling by array, disease state design
Contact
Citation
Expression and regulation of programmed cell death-associated genes in systemic necrosis of PVYNTN susceptible potato tubers. Sedlar, A., Geric Stare, B., Mavric Plesko, I., Dolnicar, P., Maras, M., Sustar-Vozlic, J., Baebler, S., Gruden, K. and Meglic, V. Plant Pathol  (2018)
MIAME
PlatformsProtocolsVariablesProcessedRaw
Files
Investigation descriptionE-MTAB-5776.idf.txt
Sample and data relationshipE-MTAB-5776.sdrf.txt
Raw data (1)E-MTAB-5776.raw.1.zip
Processed data (1)E-MTAB-5776.processed.1.zip
Array designA-MEXP-2203.adf.txt
Links