E-MTAB-5339 - ChIP-seq of Escherichia coli RpoS during stationary phase

Status
Submitted on 18 October 2012, last updated on 13 December 2016, released on 23 December 2016
Organism
Escherichia coli str. K-12 substr. MG1655
Samples (2)
Protocols (4)
Description
To determine sites where RpoS binds (and hence likely plays a direct role in transcription), we used ChIP-seq to map the association of RpoS across the Escherichia coli chromosome during stationary phase growth in minimal medium. To facilitate ChIP, RpoS was C-terminally SPA-tagged at its native locus.
Experiment types
ChIP-seq, binding site identification design
Contact
MINSEQE
Exp. designProtocolsVariablesProcessedSeq. reads
Files
Investigation descriptionE-MTAB-5339.idf.txt
Sample and data relationshipE-MTAB-5339.sdrf.txt
Links