E-MTAB-522 - Transcription profiling by array of lymphoblastic cells, fat and skin from twins

Status
Released on 3 February 2011, last updated on 3 May 2014
Organism
Homo sapiens
Samples (566)
Array (1)
Protocols (7)
Description
Gene expression was quantified in LCL, skin and fat derived from a subset of Twins UK (N=156 LCL, N=160 skin, N=166 fat) using Illuminas whole genome expression array (HumanHT-12 version 3). Cis eQTL analysis was performed in each tissue, following by multiple analyses assessing the tissue-specificity of regulatory variation.
Experiment types
transcription profiling by array, cell type comparison
Contact
Citation
The Architecture of Gene Regulatory Variation across Multiple Human Tissues: the MuTHER Study. Alexandra C. Nica, Leopold Parts, Daniel Glass, James Nisbet, Amy Barrett, Magdalena Sekowska, Mary Travers , Simon Potter, Elin Grundberg, Kerrin Small, �sa K. Hedman, Veronique Bataille, Jordana Tzenova Bell, Gabriela Surdulescu, Antigone S. Dimas, Catherine Ingle, Frank O. Nestle, Paola di Meglio, Josine L. Min, Alicja Wilk, Christopher J. Hammond , Neelam Hassanali, Tsun-Po Yang, Stephen B. Montgomery, Steve O'Rahilly, Cecilia M. Lindgren, Krina T. Zondervan, Nicole Soranzo, In�s Barroso, Richard Durbin, Kourosh Ahmadi, Panos Deloukas, Mark I. McCarthy, Emmanouil T. Dermitzakis, Timothy D. Spector, for the MuTHER Consortium.
MIAME
PlatformsProtocolsVariablesProcessedRaw
Files
Investigation descriptionE-MTAB-522.idf.txt
Sample and data relationshipE-MTAB-522.sdrf.txt
Raw data (2)E-MTAB-522.raw.1.zip, E-MTAB-522.raw.2.zip
Processed data (1)E-MTAB-522.processed.1.zip
Array designA-MEXP-1171.adf.txt
Links