E-MTAB-4787 - 5' CAGE at three embryonic times points in 82 Drosophila lines
Released on 9 January 2017, last updated on 26 January 2017
Deep sequencing of Transcriptional Start Sites (TSS) using 5' CAGE from 82 wild strains from the Drosophila Genetic reference Panel (DGRP) during embryogenesis. Three different developmental stages were assayed: 2-4hrs (stages 5-8), 6-8hrs (stages 10-11) and 10-12hrs (stages 13-14) after laying. 20 line/stage combinations were performed in biological replicates (independent embryo collections), while 5 samples were prepared as technical replicates (independent library preparation from the same RNA).
RNA-seq of coding RNA, development or differentiation design, population based design