E-MTAB-4645 - Transcriptomics of Burkholderia contaminans sequential isolates

Status
Last updated on 25 April 2016, released on 5 May 2016
Organism
Burkholderia contaminans
Samples (18)
Protocols (3)
Description
RNA-Seq data encompass transcriptomes from two sequential isolates of B. contaminans ST872. Each isolate was cultivated in three conditions (serum, sputum and BSM medium) in three biological replicates.
Experiment types
RNA-seq of coding RNA, growth condition design, replicate design
Contact
Citation
Understanding the Pathogenicity of Burkholderia contaminans, an Emerging Pathogen in Cystic Fibrosis. Nunvar J, Kalferstova L, Bloodworth RA, Kolar M, Degrossi J, Lubovich S, Cardona ST, Drevinek P. :e0160975 (2016), PMID:27512997
MINSEQE
Exp. designProtocolsVariablesProcessedSeq. reads
Files
Investigation descriptionE-MTAB-4645.idf.txt
Sample and data relationshipE-MTAB-4645.sdrf.txt
Links