E-MTAB-434 - RNA-Seq of zebrafish tissues at different developmental stages

Status
Released on 11 March 2011, last updated on 3 May 2014
Organism
Danio rerio
Samples (7)
Protocols (8)
Description
Abstract: Paired-end sequence data has been generated using polyA selected RNA from a range of zebrafish tissues and developmental stages using the Illumina Genome Analyzer. These data have been used to improve the gene annotation of the zebrafish genome. Study description: Zebrafish total RNA was extracted from embryonic and adult tissue, then polyA selected. After fragmentation and reverse transcription Illumina sequencing libraries were prepared. Paired-end sequence runs were performed with 36, 37, 54 and 76 base reads on the Illumina Genome Analyzer.
Experiment types
RNA-seq of coding RNA, development or differentiation
Contact
MINSEQE
Exp. designProtocolsVariablesProcessedSeq. reads
Files
Investigation descriptionE-MTAB-434.idf.txt
Sample and data relationshipE-MTAB-434.sdrf.txt
Links