E-MTAB-4196 - Transcription profiling by high throughput sequencing of maize third node in la1-ref mutant plants

Status
Released on 20 November 2013, last updated on 5 January 2016
Organism
Zea mays
Samples (4)
Protocols (2)
Description
The classical maize mutant lazy1 (la1), displayed prostrate growth with reduced shoot gravitropism. We compared the transcriptome profile of the third node in la1-ref mutants with those in wild-type plants using RNA-SEQ to examine the genome-wide effect of the ZmLA1 gene. We generated 14.6 and 36.5 million paired-end reads from two biological samples of wild-type and la1-ref mutant plants, respectively.
Experiment type
RNA-seq of coding RNA 
Contact
Citation
MINSEQE
Exp. designProtocolsVariablesProcessedSeq. reads
Files
Investigation descriptionE-MTAB-4196.idf.txt
Sample and data relationshipE-MTAB-4196.sdrf.txt
Links