E-MTAB-4100 - ChIP-seq analysis of human neuroblastoma cell lines
Status | Last updated on 13 September 2016, released on 25 October 2016 | ||||||||||
Organism | Homo sapiens | ||||||||||
Samples (17) | |||||||||||
Protocols (15) | |||||||||||
Description | The aim of the experiment is to identify genome wide binding sites for the transcription factor MYCN in MYCN non-amplified and MYCN amplified human neuroblastoma cell lines. Datasets are presented for the ChIP-seq analysis in the tetracycline inducible cell line SH-SY5Y-MYCN (SH-SY5Y/6TR(EU)/pTrex-Dest-30/MYCN), derivative of the parental cell line SH-SY5Y; for noninduced cells and for 24 and 48 hours of Tet induction. Analysis for patinet matched MYCN amplified cell lines SMS-KCN and SMS-KCNR is also included. | ||||||||||
Experiment types | ChIP-seq, binding site identification design, time series design | ||||||||||
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MINSEQE |
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