E-MTAB-3993 - microRNA profiling by high-throughput sequencing in the substantia nigra and striatum of Multiple System Atrophy (MSA) transgenic mice and wild type controls

Submitted on 6 November 2014, last updated on 7 March 2016, released on 15 March 2016
Mus musculus
Samples (10)
Protocols (5)
Multiple system atrophy (MSA) is a fatal rapidly progressive Ia-synucleinopathy, characterized by prominent Ia-synuclein accumulation in oligodendrocytes. In this study we investigated miRNA expression in the substantia nigra and striatum of MSA transgenic mice (Tg(Plp1-SNCA)1Haa) and wild type controls. This forms part of a larger study in which we investigated miRNA-mRNA regulatory network in substantia nigra and striatum of MSA transgenic mice in pre-motor stage of neurodegenration.
Experiment types
RNA-seq of non coding RNA, genotype design
Changes in the miRNA-mRNA Regulatory Network Precede Motor Symptoms in a Mouse Model of Multiple System Atrophy: Clinical Implications. Schafferer S, Khurana R, Refolo V, Venezia S, Sturm E, Piatti P, Hechenberger C, Hackl H, Kessler R, Willi M, Gstir R, Krogsdam A, Lusser A, Poewe W, Wenning GK, Hüttenhofer A, Stefanova N. :e0150705 (2016), PMID:26962858
Exp. designProtocolsVariablesProcessedSeq. reads
Investigation descriptionE-MTAB-3993.idf.txt
Sample and data relationshipE-MTAB-3993.sdrf.txt