E-MTAB-3885 - Transcription profiling by array of pig intestinal cells exposed to Zearalenone or E. coli contamination

Status
Submitted on 30 November 2014, last updated on 8 July 2016, released on 15 November 2016
Organism
Sus scrofa
Samples (11)
Array (1)
Protocols (7)
Description
This is a cell culture based study to asses the impact of ZEA (Zearalenone) and E. coli co-contamination on IPEC cells, these is a normal epithelial cell line isolated from a new born piglet. ZEA is a mycotoxin with a negative impact in human health. The microarray is a custom Agilent Technology array slide with the AMAID: 05685.
Experiment type
transcription profiling by array 
Contact
Citation
Zearalenone Mycotoxin Affects Immune Mediators, MAPK Signalling Molecules, Nuclear Receptors and Genome-Wide Gene Expression in Pig Spleen. Pistol GC , Braicu C , Motiu M , Gras MA , Marin DE , Stancu M , Calin L , Israel-Roming F , Berindan-Neagoe I , Taranu I. PLoS One 10(5):e0127503 (2015), PMID:26011631
MIAME
PlatformsProtocolsVariablesProcessedRaw
Files
Investigation descriptionE-MTAB-3885.idf.txt
Sample and data relationshipE-MTAB-3885.sdrf.txt
Raw data (1)E-MTAB-3885.raw.1.zip
Array designA-MTAB-556.adf.txt