E-MTAB-3504 - Integrated and functional genomics analysis validates the relevance of the nuclear variant ErbB380kDa in prostate cancer progression

Status
Submitted on 19 July 2012, last updated on 25 March 2016, released on 1 July 2016
Organism
Homo sapiens
Samples (6)
Array (1)
Protocols (5)
Description
ChIP-on-chip experiments were performed on immortalized and tumour cell lines selected upon characterization of endogenous nuclear expression of an ErbB380kDa isoform. Among the 1840 target promoters identified, 26 were selected before ErbB380kDa-dependent gene expression was evaluated by real-time quantitative RT-PCR, providing evidence that ErbB380kDa exerted transcriptional control on those genes.
Experiment types
ChIP-chip by array, cell type comparison design, disease state design
Contact
MIAME
PlatformsProtocolsVariablesProcessedRaw
Files
Investigation descriptionE-MTAB-3504.idf.txt
Sample and data relationshipE-MTAB-3504.sdrf.txt
Raw data (2)E-MTAB-3504.raw.1.zip, E-MTAB-3504.raw.2.zip
Array designA-MEXP-1515.adf.txt
Links