E-MTAB-3501 - Gene expression profiles of Rif1 conditional knock-out large T immortalized mouse embryonic fibroblast

Status
Submitted on 7 April 2015, last updated on 15 December 2015, released on 24 December 2015
Organism
Mus musculus
Samples (12)
Array (1)
Protocols (5)
Description
Mammalian Rif1 defines the architecture of replication-timing domains interactions through the three-dimensional organization of the nuclear volume. Deletion of RIf1 in mammalian cells causes an initial alteration of three-dimensional chromatin organization which impacts first on replication timing and genome stability, but has long-term indirect repercussions also on gene expression.
Experiment types
transcription profiling by array, genetic modification design
Contact
MIAME
PlatformsProtocolsVariablesProcessedRaw
Files
Investigation descriptionE-MTAB-3501.idf.txt
Sample and data relationshipE-MTAB-3501.sdrf.txt
Raw data (1)E-MTAB-3501.raw.1.zip
Processed data (1)E-MTAB-3501.processed.1.zip
Array designA-AFFY-130.adf.txt
Links