E-MTAB-3342 - Anopheles funestus amidst a South/North shift in the role of key resistance genes across Malawi

Status
Submitted on 14 November 2013, last updated on 4 March 2015, released on 12 February 2016
Organism
Anopheles funestus
Samples (36)
Array (1)
Protocols (6)
Description
Resistance to pyrethroids, the only insecticide approved for bednets, threatens control of the major malaria vector, Anopheles funestus, in Malawi. To improve the management of such resistance countrywide, it is crucial to understand the dynamics and mechanisms driving resistance in the field. In this study the levels of insecticide resistance were determined across the highly endemic densely populated lake and southern agricultural area. Insecticide resistance to pyrethoids was assessed using standardized WHO bioassay methods and resistant mosquitoes were hybridized to susceptible mosquitoes. This microarray analysis revealed the key role of cytochrome P450 genes such as CYP6P9a, CYP6P9b and CYP6M7. However, a significant shift in the over-expression of these CYP450s was detected across a south/north transect, with CYP6M7 more highly over-transcribed in the two northern collection sites and the tandemly duplicated genes, CYP6P9a and CYP6P9b, more greatly over-transcribed in the south.
Experiment types
transcription profiling by array, population based design, species design
Contact
MIAME
PlatformsProtocolsVariablesProcessedRaw
Files
Investigation descriptionE-MTAB-3342.idf.txt
Sample and data relationshipE-MTAB-3342.sdrf.txt
Raw data (2)E-MTAB-3342.raw.1.zip, E-MTAB-3342.raw.2.zip
Array designA-MEXP-2374.adf.txt