E-MTAB-3007 - RNAseq analysis of susceptible zone of the Medicago truncatula root from wild-type and Mtcre1 mutant plants 3 hours after stimulation by Rhizobium lipo-chitin oligosaccharide

Status
Submitted on 30 June 2014, released on 31 December 2015, last updated on 10 November 2017
Organism
Medicago truncatula
Samples (12)
Protocols (4)
Description
RNAseq analysis of Medicago truncatula WT and Mtcre1 3h post rhizobium LCO application 4 sample with 3 biological replicates each, sequenced in both directions
Experiment types
RNA-seq of coding RNA, stimulus or stress design
Contacts
Citation
Rhizobium Lipo-chitooligosaccharide Signaling Triggers Accumulation of Cytokinins in Medicago truncatula Roots. Arjanvan Zeijl, Rik H.M.Op den Camp, Eva E. Deinum, Tatsiana Charnikhova, Henk Franssen, Huub J.M.Op den Camp, Harro Bouwmeester, Wouter Kohlen, Ton Bisseling, René Geurts. , PMID:25804975
MINSEQE
Exp. designProtocolsVariablesProcessedSeq. reads
Files
Investigation descriptionE-MTAB-3007.idf.txt
Sample and data relationshipE-MTAB-3007.sdrf.txt
Links