E-MTAB-2678 - Gene expression in livers of Lepob/ob (ob/ob) mice v.s. wild type C57BL/6J mice

Status
Submitted on 19 April 2010, released on 29 June 2014, last updated on 24 October 2016
Organism
Mus musculus
Samples (2)
Array (1)
Protocols (5)
Description
To identify novel transcriptional factors involved in dysfunctional hepatic lipids homeostasis in obesity, mRNA microarray analysis were performed to of livers of ob/ob mice, a widely used obese model, and C57BL/6J control mice. Chow-fed ob/ob and C57BL/6J mice were housed in a 12 h of light and 12 h of dark cycle and fed ad libitum a regular chow diet. Mice were sacrificed at 16:00 (Zeitgeber Time 8 during light phase). Total RNA was prepared from each liver using TRIzol (Invitrogen). Equal aliquots of total RNA from each of four mouse livers in each group were pooled and used for biotin labeling as described in the Affymetrix technical bulletin. Then the transcriptional profiles of samples were probed using the Gene-Chip Mouse Genome 430 2.0 arrays.
Experiment types
transcription profiling by array, strain or line design
Contacts
Citation
Hepatic differentiated embryo-chondrocyte expressed gene 1 (DEC1) inhibits sterol regulatory ele-ment-binding protein-1c (SREBP-1c) expression and alleviates fatty liver phenotype. Lian Shen, Anfang Cui, Yuan Xue, Ying Cui, Xueyu Dong, Yong Gao, Hao Yang, Fude Fang, and Yongsheng Chang.
MIAME
PlatformsProtocolsVariablesProcessedRaw
Files
Investigation descriptionE-MTAB-2678.idf.txt
Sample and data relationshipE-MTAB-2678.sdrf.txt
Processed data (1)E-MTAB-2678.processed.1.zip
Array designA-GEOD-7635.adf.txt
Links