E-MTAB-2245 - RNA-seq of coding RNA of Rex1GFPd2 mouse embryonic stem cell line in undifferentiated and differentiated states in the presence or absence of Otx2 (RNAi)

Status
Last updated on 24 June 2014, released on 24 June 2014
Organism
Mus musculus
Samples (4)
Protocols (5)
Description
Gene expression was studied in the presence or absence of Otx2 (RNAi) in the Rex1GFPd2 mouse embryonic stem cell line (parental line; E14Tg2a) in undifferentiated and differentiated states.
Experiment types
RNA-seq of coding RNA, cellular modification design, co-expression, compound treatment design, in vivo
Contact
Citation
Otx2 and Oct4 Drive Early Enhancer Activation during Embryonic Stem Cell Transition from Naive Pluripotency. Yang SH, Kalkan T, Morissroe C, Marks H, Stunnenberg H, Smith A, Sharrocks AD. Cell Rep.  (2014)
MINSEQE
Exp. designProtocolsVariablesProcessedSeq. reads
Files
Investigation descriptionE-MTAB-2245.idf.txt
Sample and data relationshipE-MTAB-2245.sdrf.txt
Links