E-MTAB-1777 - Transcription profiling by array of Arabidopsis Col-0 plants and myc2myc3myc4 triple mutant plants to study the transcription target of MYC2/MYC3/MYC4 and their role in controlloing jasmonate-related defense responses

Released on 27 August 2013, last updated on 2 May 2014
Arabidopsis thaliana
Samples (6)
Array (1)
Protocols (6)
Arabidopsis thaliana plants fend off insect attack by constitutive and inducible production of toxic metabolites such as glucosinolates (GS). A triple mutant lacking MYC2, MYC3, and MYC4, three basic helix-loop-helix transcription factors that are known to additively control jasmonate-related defense responses, is highly susceptible to insect herbivory. In this study, we performed a whole-genome microarray analysis on three-week-old plants and compared wild-type (Col-0) and myc2myc3myc4 plants in control conditions (no treatment). Myc234 was shown to have a highly reduced expression of GS biosynthesis genes.
Experiment types
transcription profiling by array, co-expression, genetic modification, replicate
Arabidopsis Basic Helix-Loop-Helix Transcription Factors MYC2, MYC3, and MYC4 Regulate Glucosinolate Biosynthesis, Insect Performance, and Feeding Behavior. Schweizer F, Fernández-Calvo P, Zander M, Diez-Diaz M, Fonseca S, Glauser G, Lewsey MG, Ecker JR, Solano R, Reymond P. Plant Cell  (2013), Europe PMC 23943862
Investigation descriptionE-MTAB-1777.idf.txt
Sample and data relationshipE-MTAB-1777.sdrf.txt
Raw data (1)E-MTAB-1777.raw.1.zip
Processed data (1)E-MTAB-1777.processed.1.zip
Array designA-MEXP-2273.adf.txt