E-MTAB-1558 - Transcription profiling by array of Z. mays 20 DAP embryos MON810 vs wild type to investigate expression differences

Status
Released on 15 March 2014, last updated on 3 May 2014
Organism
Zea mays
Samples (7)
Array (1)
Protocols (6)
Description
The experiment is a transcriptomic comparison of two varieties of maize, one is a commercial transgenic variety (DKC6575 which harbors the MON810 transgene), and the other is the near-isogenic conventional variety (Tietar). The tissue that we have compared is the embryo at developmental stage of 20 days after pollination.
Experiment types
transcription profiling by array, all pairs, co-expression, genetic modification
Contact
Citations
The use of massive sequencing to detect differences between Immature Embryos of MON810 and a comparable non-GM maize variety. Jose Luis La Paz, Maria Pla, Emilio Centeno, Carlos M? Vicient, Pere Puigdomenech.
MIAME
PlatformsProtocolsVariablesProcessedRaw
Files
Investigation descriptionE-MTAB-1558.idf.txt
Sample and data relationshipE-MTAB-1558.sdrf.txt
Raw data (1)E-MTAB-1558.raw.1.zip
Array designA-MEXP-2300.adf.txt
Links