E-MTAB-1506 - ChIP-seq of histone H3 modifications in cardiomyocytes isolated from mice after one week of transverse aortic constriction

Status
Last updated on 29 November 2013, released on 30 November 2013
Organism
Mus musculus
Samples (16)
Protocols (4)
Description
ChIP-Sequencing using antibody to H3K9ac,H3K27ac,H3K4me3, H3K79me2, H3K9me2, H3K9me3 and H3K27me3 in cardiomyocytes isolated from mice after 1 week of transverse aortic constriction (TAC) and in control mice (sham).
Experiment types
ChIP-seq, binding site identification design, clinical history design
Contact
Citation
Genome-wide analysis of histone marks identifying an epigeneic signature of promoters and enhancers underlying cardiac hypertrophy. Papait R, Cattaneo P, Kunderfranco P, Greco C, Carullo P, Guffanti A, Vigano V, Stirparo GG, Latronico MV, Hasenfuss G, Chen J, Condorelli G. Proc Natl Acad Sci U S A  (2013)
MINSEQE
Exp. designProtocolsVariablesProcessedSeq. reads
Files
Investigation descriptionE-MTAB-1506.idf.txt
Sample and data relationshipE-MTAB-1506.sdrf.txt
Links