E-MTAB-1297 - Transcription profiling by high throughput sequencing of mouse livers with different relative nuclear sizes before/after hepatectomy from Cdk1-null knockout and wild-type animals

Status
Last updated on 24 February 2014, released on 6 March 2014
Organism
Mus musculus
Samples (16)
Protocols (5)
Description
A partially hepatectomized mouse liver with a liver-specific conditional Cdk1 knock-out genotype grows back to the normal size in the absence of cell divisions resulting in highly enlarged nuclear and cell size. This experiment analyses gene expression in four sets of mouse livers all with different nuclear sizes: controls without hepatectomy, controls with hepatectomy, Cdk1 null without hepatectomy and Cdk1 null with hepatectomy.
Experiment types
RNA-seq of coding RNA, co-expression, genetic modification, in vivo
Contact
Citation
Identification of Transcriptional and Metabolic Programs Related to Mammalian Cell Size. Teemu P. Miettinen, Heli K.J. Pessa, Matias J. Caldez, Tobias Fuhrer, M. Kasim Diril, Uwe Sauer, Philipp Kaldis and Mikael Björklund. Current Biology  (2014)
MINSEQE
Exp. designProtocolsVariablesProcessedSeq. reads
Files
Investigation descriptionE-MTAB-1297.idf.txt
Sample and data relationshipE-MTAB-1297.sdrf.txt
Links