E-MTAB-1030 - mRNA Sequencing of STG in schizophrenia

Status
Released on 8 March 2013, last updated on 26 April 2016
Organism
Homo sapiens
Samples (18)
Protocols (4)
Description
The RNA was extracted from post-mortem cortical grey matter of STG from the left hemisphere of 9 pairs of male subjects with schizophrenia and matched non-psychiatric controls. Each sample was subjected to 76 cycles of sequencing from a single end in one lane of Illumina Genome Analyzer II.
Experiment types
RNA-seq of coding RNA, co-expression, disease state, high throughput sequencing
Contact
Citations
Transcriptome Sequencing Revealed Significant Alteration of Cortical Promoter Usage and Splicing in Schizophrenia. Jing Qin Wu, Xi Wang, Paul A. Tooney, Rodney J Scott, Vaughan J. Carr and Murray J. Cairns.
Transcriptome sequencing revealed significant alteration of cortical promoter usage and splicing in schizophrenia. Wu JQ, Wang X, Beveridge NJ, Tooney PA, Scott RJ, Carr VJ, Cairns MJ. :e36351 (2012), PMID:22558445
MINSEQE
Exp. designProtocolsVariablesProcessedSeq. reads
Files
Investigation descriptionE-MTAB-1030.idf.txt
Sample and data relationshipE-MTAB-1030.sdrf.txt
Links