E-MEXP-3740 - Transcription profiling by array of mouse liver progenitor cells and extracellular vesicles isolated from these cells

Last updated on 22 July 2013, released on 23 July 2013
Mus musculus, Rattus norvegicus
Samples (5)
Arrays (2)
Protocols (4)
In this study, we address mRNA composition of hepatocyte-like derived extracellular vesicles (EVs), using as cellular model the mouse liver derived cell line MLP29, and primary cell culture of rat hepatocyte (RH) obtained by in vivo liver perfusion. The study shows qualitative characterization of RNA, identification of transcripts and its functional characterization through gene expression array technique. To reach a deeper nowledge in the biology of EVs, we perform RNase protection assay, density gradients matching RNA with typical exosomal protein markers, and capture assays to probe that mRNA was internalized. Aim of the project: To identify transcripts present in extracellular vesicles secreted by Rat hepatocytes primary cell culture and to identify extracellular vesicles secreted by mouse hepatocyte cell line MLP29, and in this case, compare the enrichment of transcripts respect to the cell, to know if the composition in the extracellular vesicles is similar to the cell, or if their composition is not directly determined by the abundance of transcripts in the cell.
Experiment types
transcription profiling by array, co-expression, in vitro, is expressed
Transcriptome of Extracellular Vesicles Released by Hepatocytes. Royo F, Schlangen K, Palomo L, Gonzalez E, Conde-Vancells J, Berisa A, Aransay AM and Falcon-Perez JM. PLoS ONE  (2013)
Investigation descriptionE-MEXP-3740.idf.txt
Sample and data relationshipE-MEXP-3740.sdrf.txt
Raw data (1)E-MEXP-3740.raw.1.zip
Array designsA-AFFY-43.adf.txt, A-MEXP-1175.adf.txt