ArrayExpress

E-MEXP-2406 - Transcription profiling of brain, liver and spleen from rats infected with Escherichia coli K1 and treated with capsule-selective endosialidase E

Status	Submitted on 14 October 2009, released on 1 March 2010, last updated on 3 June 2014
Organism	Rattus norvegicus
Samples (12)	Click for detailed sample information and links to data
Array (1)	A-AFFY-43 - Affymetrix GeneChip Rat Genome 230 2.0 [Rat230_2]
Protocols (8)	Click for detailed protocol information
Description	Transcription profiling of infected and treated (Capsule-Selective Endosialidase E Minimizes) of RNA isolated from brain/spleen/liver of rats with E.coli K1
Experiment types	transcription profiling by array, co-expression, reference, transcript identification
Contact	Ozan Gundogdu <ozan.gundogdu@lshtm.ac.uk>
Citations	Administration of capsule-selective endosialidase E minimizes upregulation of organ gene expression induced by experimental systemic infection with Escherichia coli K1. Zelmer, Andrea; Martin, Melissa J.; Gundogdu, Ozan; Birchenough, George; Lever, Rebecca; Wren, Brendan W.; Luzio, J. Paul; Taylor, Peter W. , PMID:20395269 Administration of capsule-selective endosialidase E minimizes upregulation of organ gene expression induced by experimental systemic infection with Escherichia coli K1. Zelmer A, Martin MJ, Gundogdu O, Birchenough G, Lever R, Wren BW, Luzio JP, Taylor PW. :2205-2215 (2010), PMID:20395269
MIAME	Platforms Protocols Variables Processed Raw
Files	Investigation description E-MEXP-2406.idf.txt Sample and data relationship E-MEXP-2406.sdrf.txt Raw data (1) E-MEXP-2406.raw.1.zip Processed data (1) E-MEXP-2406.processed.1.zip Array design A-AFFY-43.adf.txt R ExpressionSet E-MEXP-2406.eSet.r Click to browse all available files
Links	Send E-MEXP-2406 data to GenomeSpace