Please note that we have stopped the regular imports of Gene Expression Omnibus (GEO) data into ArrayExpress. This may not be the latest version of this experiment.

E-GEOD-81838 - Gene expression anlaysis of laser-capture microdissected tumor and stroma from triple negative breast cancer

Status
Released on 1 July 2016, last updated on 11 July 2016
Organism
Homo sapiens
Samples (20)
Array (1)
Protocols (5)
Description
LCM was perfomed on adjacent tumor and stromal cells to identify differentially expressed genes in triple negative breast cancer. To determine differences in tumor and adjacent stromal tissue, laser-capture microdissction was perfomed on 10 triple negative breast cancer specimans to isolate tumor and stromal cells for gene expression analysis. RNA was isolated from captured cells and hybridized to affymetrix gene expression microarrays.
Experiment type
transcription profiling by array 
Contacts
MIAME
PlatformsProtocolsVariablesProcessedRaw
Files
Investigation descriptionE-GEOD-81838.idf.txt
Sample and data relationshipE-GEOD-81838.sdrf.txt
Raw data (1)E-GEOD-81838.raw.1.zip
Processed data (1)E-GEOD-81838.processed.1.zip
Array designA-AFFY-141.adf.txt
Links