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E-GEOD-80087 - Gene expression profiling of retrovirus PDGFB-induced glioma

Status
Released on 17 May 2016, last updated on 22 May 2016
Organism
Mus musculus
Samples (15)
Protocols (2)
Description
We performed gene expression profilings of platelet-derived growth factor subunit B (PDGFB)-induced mouse glioma to compare the differential transcriptome profiles between Ctrl-T tumor cells and Olig2cKO tumor cells. Expression profiling of Ctrl-T and Olig2cKO brain tumor (glioma) cells, normal oligodendrocyte progenitor cells (OPCs), normal astrocytes, and normal brain cortex by high-throughput sequencing.
Experiment type
RNA-seq of coding RNA 
Contacts
Citation
Olig2-Dependent Reciprocal Shift in PDGF and EGF Receptor Signaling Regulates Tumor Phenotype and Mitotic Growth in Malignant Glioma. Lu F, Chen Y, Zhao C, Wang H, He D, Xu L, Wang J, He X, Deng Y, Lu EE, Liu X, Verma R, Bu H, Drissi R, Fouladi M, Stemmer-Rachamimov AO, Burns D, Xin M, Rubin JB, Bahassi el M, Canoll P, Holland EC, Lu QR. , PMID:27165742
MINSEQE
Exp. designProtocolsVariablesProcessedSeq. reads
Files
Investigation descriptionE-GEOD-80087.idf.txt
Sample and data relationshipE-GEOD-80087.sdrf.txt
Processed data (1)E-GEOD-80087.processed.1.zip
Links