E-GEOD-7881 - Transcription profiling of soybean seed compartments with embryos at the cotyledon stage

Status
Submitted on 23 May 2007, released on 15 June 2008, last updated on 10 June 2011
Organism
Glycine max
Samples (18)
Array (1)
Protocols (7)
Description
We microdissected each compartment from 8-micron paraffin sections using the Leica LMD6000 system to identify all genes active in different compartments of a soybean seed containing a cotyledon-stage embryo. Experiment Overall Design: cotyledon-stage seed compartments were isolated using the Leica LMD6000 system. Total RNA was amplified and hybridized with Affymetrix Soybean Genome Arrays.
Experiment types
transcription profiling by array, unknown experiment type
Contact
MIAME
PlatformsProtocolsVariablesProcessedRaw
Files
Investigation descriptionE-GEOD-7881.idf.txt
Sample and data relationshipE-GEOD-7881.sdrf.txt
Raw data (1)E-GEOD-7881.raw.1.zip
Processed data (1)E-GEOD-7881.processed.1.zip
Array designA-AFFY-59.adf.txt
R ExpressionSetE-GEOD-7881.eSet.r
Links